RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 POGZQ7Z3K3 1410 aa20.26■□□□□ 0.83
RTFDC1-201ENST00000023939 PLA2R1Q13018 1463 aa20.26■□□□□ 0.83
RTFDC1-201ENST00000023939 DHX29Q7Z478 1369 aaKnown RBP20.26■□□□□ 0.83
RTFDC1-201ENST00000023939 EIF4G2P78344 907 aaKnown RBP eCLIP20.24■□□□□ 0.83
RTFDC1-201ENST00000023939 VWDEQ8N2E2 1590 aa20.24■□□□□ 0.83
RTFDC1-201ENST00000023939 MLH3Q9UHC1 1453 aa20.24■□□□□ 0.83
RTFDC1-201ENST00000023939 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
RTFDC1-201ENST00000023939 CYB5RLQ6IPT4 315 aa20.24■□□□□ 0.83
RTFDC1-201ENST00000023939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.832e-8■■■□□ 14.7
RTFDC1-201ENST00000023939 CCDC144AA2RUR9 1427 aa20.23■□□□□ 0.83
RTFDC1-201ENST00000023939 MAP3K4Q9Y6R4 1608 aa20.23■□□□□ 0.83
RTFDC1-201ENST00000023939 HSPA5P11021 654 aaKnown RBP20.22■□□□□ 0.83
RTFDC1-201ENST00000023939 SPATA31E1Q6ZUB1 1445 aa20.2■□□□□ 0.82
RTFDC1-201ENST00000023939 PRDM15P57071 1507 aaPredicted RBP20.2■□□□□ 0.82
RTFDC1-201ENST00000023939 HIRIP3Q9BW71 556 aaPredicted RBP20.2■□□□□ 0.82
RTFDC1-201ENST00000023939 DDX10Q13206 875 aaKnown RBP20.19■□□□□ 0.82
RTFDC1-201ENST00000023939 RALGAPBQ86X10 1494 aa20.18■□□□□ 0.82
RTFDC1-201ENST00000023939 HECW2Q9P2P5 1572 aa20.18■□□□□ 0.82
RTFDC1-201ENST00000023939 TET3O43151 1660 aa20.18■□□□□ 0.82
RTFDC1-201ENST00000023939 KANK1Q14678 1352 aa20.17■□□□□ 0.82
RTFDC1-201ENST00000023939 MROH1Q8NDA8 1641 aa20.16■□□□□ 0.82
RTFDC1-201ENST00000023939 A2MP01023 1474 aa20.16■□□□□ 0.82
RTFDC1-201ENST00000023939 PTPRTO14522 1441 aa20.16■□□□□ 0.82
RTFDC1-201ENST00000023939 E9PCH4 1651 aa20.15■□□□□ 0.82
RTFDC1-201ENST00000023939 RNF17Q9BXT8 1623 aaKnown RBP20.14■□□□□ 0.81
RTFDC1-201ENST00000023939 BCORL1Q5H9F3 1711 aa20.14■□□□□ 0.81
RTFDC1-201ENST00000023939 CENPBP07199 599 aaPredicted RBP20.13■□□□□ 0.81
RTFDC1-201ENST00000023939 TRPM2O94759 1503 aa20.13■□□□□ 0.81
RTFDC1-201ENST00000023939 LMTK2Q8IWU2 1503 aa20.13■□□□□ 0.81
RTFDC1-201ENST00000023939 KIF3BO15066 747 aa20.13■□□□□ 0.81
RTFDC1-201ENST00000023939 MYT1LQ9UL68 1186 aa20.12■□□□□ 0.81
RTFDC1-201ENST00000023939 DIP2BQ9P265 1576 aa20.12■□□□□ 0.81
RTFDC1-201ENST00000023939 WASHC2AQ641Q2 1341 aa20.11■□□□□ 0.81
RTFDC1-201ENST00000023939 FRMPD1Q5SYB0 1578 aa20.1■□□□□ 0.81
RTFDC1-201ENST00000023939 DCAF11Q8TEB1 546 aa20.09■□□□□ 0.81
RTFDC1-201ENST00000023939 PRAG1Q86YV5 1406 aa20.08■□□□□ 0.81
RTFDC1-201ENST00000023939 SPHKAPQ2M3C7 1700 aa20.08■□□□□ 0.81
RTFDC1-201ENST00000023939 RICTORQ6R327 1708 aa20.08■□□□□ 0.81
RTFDC1-201ENST00000023939 ABCA6Q8N139 1617 aa20.08■□□□□ 0.8
RTFDC1-201ENST00000023939 NEURL4Q96JN8 1562 aa20.07■□□□□ 0.8
RTFDC1-201ENST00000023939 USP47Q96K76 1375 aa20.07■□□□□ 0.8
RTFDC1-201ENST00000023939 CCDC7Q96M83 1385 aa20.07■□□□□ 0.8
RTFDC1-201ENST00000023939 POLR1AO95602 1720 aaPredicted RBP20.06■□□□□ 0.8
RTFDC1-201ENST00000023939 EFCAB6Q5THR3 1501 aa20.06■□□□□ 0.8
RTFDC1-201ENST00000023939 DIP2CQ9Y2E4 1556 aa20.04■□□□□ 0.8
RTFDC1-201ENST00000023939 ZNF326Q5BKZ1 582 aaKnown RBP20.04■□□□□ 0.8
RTFDC1-201ENST00000023939 STAC3Q96MF2 364 aa20.04■□□□□ 0.8
RTFDC1-201ENST00000023939 TRPM1Q7Z4N2 1603 aa20.03■□□□□ 0.8
RTFDC1-201ENST00000023939 FAM69CQ0P6D2 419 aa20.03■□□□□ 0.8
RTFDC1-201ENST00000023939 GPRASP1Q5JY77 1395 aa20.03■□□□□ 0.8
RTFDC1-201ENST00000023939 RAPGEF3O95398 923 aa20.02■□□□□ 0.8
RTFDC1-201ENST00000023939 KDM2AQ9Y2K7 1162 aa20.02■□□□□ 0.8
RTFDC1-201ENST00000023939 CEP152O94986 1710 aa20.02■□□□□ 0.8
RTFDC1-201ENST00000023939 ZMYM4Q5VZL5 1548 aa20.02■□□□□ 0.8
RTFDC1-201ENST00000023939 ARID4BQ4LE39 1312 aaPredicted RBP20.02■□□□□ 0.8
RTFDC1-201ENST00000023939 LAMC1P11047 1609 aa20.02■□□□□ 0.8
RTFDC1-201ENST00000023939 C11orf95C9JLR9 678 aaPredicted RBP20.02■□□□□ 0.79
RTFDC1-201ENST00000023939 CCER2I3L3R5 266 aa20.02■□□□□ 0.79
RTFDC1-201ENST00000023939 CLTCL1P53675 1640 aa20.01■□□□□ 0.79
RTFDC1-201ENST00000023939 ANP32CO43423 234 aa20.01■□□□□ 0.79
RTFDC1-201ENST00000023939 PPRC1Q5VV67 1664 aaKnown RBP20■□□□□ 0.79
RTFDC1-201ENST00000023939 CARD11Q9BXL7 1154 aa20■□□□□ 0.79
RTFDC1-201ENST00000023939 CNTLNQ9NXG0 1405 aa20■□□□□ 0.79
RTFDC1-201ENST00000023939 RGL3Q3MIN7 710 aa19.99■□□□□ 0.79
RTFDC1-201ENST00000023939 ROCK2O75116 1388 aaKnown RBP19.98■□□□□ 0.79
RTFDC1-201ENST00000023939 KIF7Q2M1P5 1343 aa19.98■□□□□ 0.79
RTFDC1-201ENST00000023939 YTHDC1Q96MU7 727 aaKnown RBP19.96■□□□□ 0.79
RTFDC1-201ENST00000023939 ABCC3O15438 1527 aa19.95■□□□□ 0.78
RTFDC1-201ENST00000023939 YEATS2Q9ULM3 1422 aa19.93■□□□□ 0.78
RTFDC1-201ENST00000023939 MADDQ8WXG6 1647 aa19.92■□□□□ 0.78
RTFDC1-201ENST00000023939 NPATQ14207 1427 aa19.92■□□□□ 0.78
RTFDC1-201ENST00000023939 REREQ9P2R6 1566 aa19.91■□□□□ 0.78
RTFDC1-201ENST00000023939 ZC3H13Q5T200 1668 aaKnown RBP19.91■□□□□ 0.78
RTFDC1-201ENST00000023939 ARHGAP31Q2M1Z3 1444 aa19.9■□□□□ 0.78
RTFDC1-201ENST00000023939 GGT6Q6P531 493 aa19.89■□□□□ 0.77
RTFDC1-201ENST00000023939 CAMSAP1Q5T5Y3 1602 aa19.89■□□□□ 0.77
RTFDC1-201ENST00000023939 MYOM2P54296 1465 aa19.88■□□□□ 0.77
RTFDC1-201ENST00000023939 WASHC2CQ9Y4E1 1318 aa19.88■□□□□ 0.77
RTFDC1-201ENST00000023939 KIF13AQ9H1H9 1805 aa19.88■□□□□ 0.77
RTFDC1-201ENST00000023939 ST20-MTHFSA0A0A6YYL1 179 aa19.88■□□□□ 0.77
RTFDC1-201ENST00000023939 NBPF1Q3BBV0 1214 aa19.88■□□□□ 0.77
RTFDC1-201ENST00000023939 KIF1BO60333 1816 aa19.87■□□□□ 0.77
RTFDC1-201ENST00000023939 NOS1P29475 1434 aa19.87■□□□□ 0.77
RTFDC1-201ENST00000023939 ADGRB3O60242 1522 aa19.86■□□□□ 0.77
RTFDC1-201ENST00000023939 UGGT1Q9NYU2 1555 aa19.86■□□□□ 0.77
RTFDC1-201ENST00000023939 TSPOAP1O95153 1857 aa19.86■□□□□ 0.77
RTFDC1-201ENST00000023939 AGLP35573 1532 aa19.86■□□□□ 0.77
RTFDC1-201ENST00000023939 KIAA1210Q9ULL0 1709 aa19.85■□□□□ 0.77
RTFDC1-201ENST00000023939 IFT172Q9UG01 1749 aa19.83■□□□□ 0.77
RTFDC1-201ENST00000023939 NRXN1Q9ULB1 1477 aa19.83■□□□□ 0.76
RTFDC1-201ENST00000023939 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
RTFDC1-201ENST00000023939 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
RTFDC1-201ENST00000023939 PIK3C2BO00750 1634 aa19.8■□□□□ 0.76
RTFDC1-201ENST00000023939 MROH2AA6NES4 1674 aa19.8■□□□□ 0.76
RTFDC1-201ENST00000023939 IQGAP1P46940 1657 aa19.8■□□□□ 0.76
RTFDC1-201ENST00000023939 PRKRIP1Q9H875 184 aaPredicted RBP19.79■□□□□ 0.76
RTFDC1-201ENST00000023939 TESK2Q96S53 571 aa19.79■□□□□ 0.76
RTFDC1-201ENST00000023939 SIGLEC1Q9BZZ2 1709 aa19.78■□□□□ 0.76
RTFDC1-201ENST00000023939 COL17A1Q9UMD9 1497 aaPredicted RBP19.78■□□□□ 0.76
RTFDC1-201ENST00000023939 RPGRIP1LQ68CZ1 1315 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms