RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 AGERQ15109 404 aa5.52□□□□□ -1.53
CFTR-201ENST00000003084 NEUROD2Q15784 382 aa5.52□□□□□ -1.53
CFTR-201ENST00000003084 ROCK2O75116 1388 aaKnown RBP5.52□□□□□ -1.53
CFTR-201ENST00000003084 LAMC3Q9Y6N6 1575 aa5.52□□□□□ -1.53
CFTR-201ENST00000003084 ERICH3Q5RHP9 1530 aa5.52□□□□□ -1.53
CFTR-201ENST00000003084 DNMBPQ6XZF7 1577 aa5.52□□□□□ -1.53
CFTR-201ENST00000003084 SIN3AQ96ST3 1273 aa5.52□□□□□ -1.53
CFTR-201ENST00000003084 CABP2Q9NPB3 220 aa5.52□□□□□ -1.53
CFTR-201ENST00000003084 ZBTB22O15209 634 aa5.52□□□□□ -1.53
CFTR-201ENST00000003084 CASC1Q6TDU7 716 aa5.52□□□□□ -1.53
CFTR-201ENST00000003084 MORC1Q86VD1 984 aa5.52□□□□□ -1.53
CFTR-201ENST00000003084 AQRO60306 1485 aaKnown RBP eCLIP5.52□□□□□ -1.53
CFTR-201ENST00000003084 RAD21O60216 631 aa5.51□□□□□ -1.53
CFTR-201ENST00000003084 ANP32BQ92688 251 aaKnown RBP5.51□□□□□ -1.53
CFTR-201ENST00000003084 EFCAB5A4FU69 1503 aa5.51□□□□□ -1.53
CFTR-201ENST00000003084 PRM3Q9NNZ6 103 aa5.51□□□□□ -1.53
CFTR-201ENST00000003084 RAB3GAP2Q9H2M9 1393 aa5.51□□□□□ -1.53
CFTR-201ENST00000003084 PRKAR2AP13861 404 aaKnown RBP5.51□□□□□ -1.53
CFTR-201ENST00000003084 CYB5RLQ6IPT4 315 aa5.51□□□□□ -1.53
CFTR-201ENST00000003084 CHMP4AQ9BY43 222 aa5.51□□□□□ -1.53
CFTR-201ENST00000003084 KIF21BO75037 1637 aa5.51□□□□□ -1.53
CFTR-201ENST00000003084 TBC1D12O60347 775 aa5.5□□□□□ -1.53
CFTR-201ENST00000003084 CALD1Q05682 793 aaKnown RBP5.5□□□□□ -1.53
CFTR-201ENST00000003084 HIRIP3Q9BW71 556 aaPredicted RBP5.5□□□□□ -1.53
CFTR-201ENST00000003084 KTN1Q86UP2 1357 aaKnown RBP5.5□□□□□ -1.53
CFTR-201ENST00000003084 FTSJ3Q8IY81 847 aaKnown RBP5.5□□□□□ -1.53
CFTR-201ENST00000003084 TOPBP1Q92547 1522 aa5.5□□□□□ -1.53
CFTR-201ENST00000003084 SYNJ2O15056 1496 aa5.5□□□□□ -1.53
CFTR-201ENST00000003084 MYOM3Q5VTT5 1437 aa5.5□□□□□ -1.53
CFTR-201ENST00000003084 BCL11BQ9C0K0 894 aaPredicted RBP5.5□□□□□ -1.53
CFTR-201ENST00000003084 PRDM2Q13029 1718 aa5.5□□□□□ -1.53
CFTR-201ENST00000003084 TOP2BQ02880 1626 aa5.5□□□□□ -1.53
CFTR-201ENST00000003084 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.5□□□□□ -1.53
CFTR-201ENST00000003084 CASKIN1Q8WXD9 1431 aa5.49□□□□□ -1.53
CFTR-201ENST00000003084 CC2D1BQ5T0F9 858 aaKnown RBP5.49□□□□□ -1.53
CFTR-201ENST00000003084 TERF2IPQ9NYB0 399 aa5.49□□□□□ -1.53
CFTR-201ENST00000003084 CHMP4BP1P59074 171 aa5.49□□□□□ -1.53
CFTR-201ENST00000003084 STK26Q9P289 416 aa5.49□□□□□ -1.53
CFTR-201ENST00000003084 GRXCR2A6NFK2 248 aa5.49□□□□□ -1.53
CFTR-201ENST00000003084 U2SURPO15042 1029 aaKnown RBP5.49□□□□□ -1.53
CFTR-201ENST00000003084 RALBP1Q15311 655 aa5.49□□□□□ -1.53
CFTR-201ENST00000003084 PLEKHH2Q8IVE3 1493 aa5.49□□□□□ -1.53
CFTR-201ENST00000003084 NPHP1O15259 732 aa5.49□□□□□ -1.53
CFTR-201ENST00000003084 AAMPQ13685 434 aa5.49□□□□□ -1.53
CFTR-201ENST00000003084 RTF1Q92541 710 aaKnown RBP5.49□□□□□ -1.53
CFTR-201ENST00000003084 CCDC144AA2RUR9 1427 aa5.48□□□□□ -1.53
CFTR-201ENST00000003084 FAM69CQ0P6D2 419 aa5.48□□□□□ -1.53
CFTR-201ENST00000003084 FYCO1Q9BQS8 1478 aa5.48□□□□□ -1.53
CFTR-201ENST00000003084 PRG4Q92954 1404 aaPredicted RBP5.48□□□□□ -1.53
CFTR-201ENST00000003084 ARXQ96QS3 562 aa5.48□□□□□ -1.53
CFTR-201ENST00000003084 LAS1LQ9Y4W2 734 aaKnown RBP5.48□□□□□ -1.53
CFTR-201ENST00000003084 HSPA5P11021 654 aaKnown RBP5.48□□□□□ -1.53
CFTR-201ENST00000003084 VGFO15240 615 aaPredicted RBP5.48□□□□□ -1.53
CFTR-201ENST00000003084 CCER2I3L3R5 266 aa5.47□□□□□ -1.53
CFTR-201ENST00000003084 DDRGK1Q96HY6 314 aa5.47□□□□□ -1.53
CFTR-201ENST00000003084 SNAPC4Q5SXM2 1469 aa5.47□□□□□ -1.53
CFTR-201ENST00000003084 RUSC2Q8N2Y8 1516 aa5.47□□□□□ -1.53
CFTR-201ENST00000003084 BICRAQ9NZM4 1560 aa5.47□□□□□ -1.53
CFTR-201ENST00000003084 HECW1Q76N89 1606 aa5.47□□□□□ -1.53
CFTR-201ENST00000003084 NESP48681 1621 aa5.47□□□□□ -1.53
CFTR-201ENST00000003084 BECN1Q14457 450 aa5.47□□□□□ -1.53
CFTR-201ENST00000003084 ZNF467Q7Z7K2 595 aaPredicted RBP5.46□□□□□ -1.53
CFTR-201ENST00000003084 ARHGAP5Q13017 1502 aa5.46□□□□□ -1.54
CFTR-201ENST00000003084 SLC4A2P04920 1241 aa5.46□□□□□ -1.54
CFTR-201ENST00000003084 CSB-PGBD3P0DP91 1061 aa5.46□□□□□ -1.54
CFTR-201ENST00000003084 TNNT2P45379 298 aaPredicted RBP5.46□□□□□ -1.54
CFTR-201ENST00000003084 RIMBP2O15034 1052 aa5.46□□□□□ -1.54
CFTR-201ENST00000003084 SAFB2Q14151 953 aaKnown RBP eCLIP5.46□□□□□ -1.54
CFTR-201ENST00000003084 POLA1P09884 1462 aaPredicted RBP5.46□□□□□ -1.54
CFTR-201ENST00000003084 EHBP1L1Q8N3D4 1523 aa5.45□□□□□ -1.54
CFTR-201ENST00000003084 CUL7Q14999 1698 aa5.45□□□□□ -1.54
CFTR-201ENST00000003084 SYNJ1O43426 1573 aa5.45□□□□□ -1.54
CFTR-201ENST00000003084 OS9Q13438 667 aaPredicted RBP5.44□□□□□ -1.54
CFTR-201ENST00000003084 NGDNQ8NEJ9 315 aaKnown RBP5.44□□□□□ -1.54
CFTR-201ENST00000003084 NUTM2BA6NNL0 878 aaPredicted RBP5.44□□□□□ -1.54
CFTR-201ENST00000003084 NUTM2EB1AL46 878 aaPredicted RBP5.44□□□□□ -1.54
CFTR-201ENST00000003084 NUTM2DQ5VT03 806 aaPredicted RBP5.44□□□□□ -1.54
CFTR-201ENST00000003084 NUTM2AQ8IVF1 878 aaPredicted RBP5.44□□□□□ -1.54
CFTR-201ENST00000003084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.44□□□□□ -1.54
CFTR-201ENST00000003084 PHLDB1Q86UU1 1377 aa5.44□□□□□ -1.54
CFTR-201ENST00000003084 NCLP19338 710 aaKnown RBP5.44□□□□□ -1.54
CFTR-201ENST00000003084 LMOD3Q0VAK6 560 aa5.44□□□□□ -1.54
CFTR-201ENST00000003084 IPO8O15397 1037 aaKnown RBP5.44□□□□□ -1.54
CFTR-201ENST00000003084 ABCA10Q8WWZ4 1543 aa5.44□□□□□ -1.54
CFTR-201ENST00000003084 FGD6Q6ZV73 1430 aa5.44□□□□□ -1.54
CFTR-201ENST00000003084 PEG3Q9GZU2 1588 aa5.44□□□□□ -1.54
CFTR-201ENST00000003084 LRRC9Q6ZRR7 1453 aa5.44□□□□□ -1.54
CFTR-201ENST00000003084 EVC2Q86UK5 1308 aa5.43□□□□□ -1.54
CFTR-201ENST00000003084 HDAC5Q9UQL6 1122 aa5.43□□□□□ -1.54
CFTR-201ENST00000003084 MAGI1Q96QZ7 1491 aaPredicted RBP5.43□□□□□ -1.54
CFTR-201ENST00000003084 TMX4Q9H1E5 349 aaPredicted RBP5.43□□□□□ -1.54
CFTR-201ENST00000003084 GTF2E1P29083 439 aaPredicted RBP5.43□□□□□ -1.54
CFTR-201ENST00000003084 NCOA2Q15596 1464 aa5.43□□□□□ -1.54
CFTR-201ENST00000003084 KIAA0586Q9BVV6 1533 aa5.42□□□□□ -1.54
CFTR-201ENST00000003084 POGZQ7Z3K3 1410 aa5.42□□□□□ -1.54
CFTR-201ENST00000003084 PSME1Q06323 249 aa5.42□□□□□ -1.54
CFTR-201ENST00000003084 ANP32EQ9BTT0 268 aa5.42□□□□□ -1.54
CFTR-201ENST00000003084 KIF15Q9NS87 1388 aa5.42□□□□□ -1.54
CFTR-201ENST00000003084 RBM33Q96EV2 1170 aaKnown RBP5.42□□□□□ -1.54
CFTR-201ENST00000003084 SOX12O15370 315 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms