RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 CHIC1Q5VXU3 224 aa9.05□□□□□ -0.96
CFTR-201ENST00000003084 AEBP2Q6ZN18 517 aaPredicted RBP8.37□□□□□ -1.07
CFTR-201ENST00000003084 SENP3Q9H4L4 574 aaPredicted RBP7.97□□□□□ -1.13
CFTR-201ENST00000003084 PHF23Q9BUL5 403 aaPredicted RBP7.82□□□□□ -1.16
CFTR-201ENST00000003084 PLPPR3Q6T4P5 718 aa7.74□□□□□ -1.17
CFTR-201ENST00000003084 DCAF8L1A6NGE4 600 aa7.67□□□□□ -1.18
CFTR-201ENST00000003084 NISCHQ9Y2I1 1504 aa7.58□□□□□ -1.2
CFTR-201ENST00000003084 EHMT2Q96KQ7 1210 aa7.53□□□□□ -1.2
CFTR-201ENST00000003084 DCAF8L2P0C7V8 631 aa7.47□□□□□ -1.21
CFTR-201ENST00000003084 PIAS4Q8N2W9 510 aaPredicted RBP7.42□□□□□ -1.22
CFTR-201ENST00000003084 NCBP3Q53F19 620 aaKnown RBP7.3□□□□□ -1.24
CFTR-201ENST00000003084 SCAF1Q9H7N4 1312 aaKnown RBP7.26□□□□□ -1.25
CFTR-201ENST00000003084 ADRA2BP18089 450 aa7.18□□□□□ -1.26
CFTR-201ENST00000003084 SLC4A1APQ9BWU0 796 aaKnown RBP6.99□□□□□ -1.29
CFTR-201ENST00000003084 SUPT5HO00267 1087 aaKnown RBP6.96□□□□□ -1.3
CFTR-201ENST00000003084 SHROOM4Q9ULL8 1493 aa6.93□□□□□ -1.3
CFTR-201ENST00000003084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.92□□□□□ -1.3
CFTR-201ENST00000003084 ATP1B4Q9UN42 357 aaPredicted RBP6.92□□□□□ -1.3
CFTR-201ENST00000003084 FOXD1Q16676 465 aa6.9□□□□□ -1.31
CFTR-201ENST00000003084 MSH5O43196 834 aa6.85□□□□□ -1.31
CFTR-201ENST00000003084 PLEKHG5O94827 1062 aa6.83□□□□□ -1.32
CFTR-201ENST00000003084 FAM9AQ8IZU1 332 aaPredicted RBP6.82□□□□□ -1.32
CFTR-201ENST00000003084 PPP4R3CPQ6ZMV5 832 aa6.8□□□□□ -1.32
CFTR-201ENST00000003084 KLHL34Q8N239 644 aa6.79□□□□□ -1.32
CFTR-201ENST00000003084 APLP2Q06481 763 aa6.75□□□□□ -1.33
CFTR-201ENST00000003084 KCNA4P22459 653 aa6.72□□□□□ -1.33
CFTR-201ENST00000003084 TRHP20396 242 aaPredicted RBP6.66□□□□□ -1.34
CFTR-201ENST00000003084 CAPN15O75808 1086 aa6.66□□□□□ -1.34
CFTR-201ENST00000003084 PPP6R1Q9UPN7 881 aa6.58□□□□□ -1.36
CFTR-201ENST00000003084 TRIM41Q8WV44 630 aa6.56□□□□□ -1.36
CFTR-201ENST00000003084 MYT1LQ9UL68 1186 aa6.54□□□□□ -1.36
CFTR-201ENST00000003084 PLCD3Q8N3E9 789 aa6.53□□□□□ -1.36
CFTR-201ENST00000003084 FBLN2P98095 1184 aa6.53□□□□□ -1.36
CFTR-201ENST00000003084 ABCC9O60706 1549 aa6.52□□□□□ -1.37
CFTR-201ENST00000003084 CNKSR2Q8WXI2 1034 aa6.5□□□□□ -1.37
CFTR-201ENST00000003084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.5□□□□□ -1.37
CFTR-201ENST00000003084 HNRNPUL2Q1KMD3 747 aaKnown RBP6.5□□□□□ -1.37
CFTR-201ENST00000003084 UBTFP17480 764 aaKnown RBP6.46□□□□□ -1.38
CFTR-201ENST00000003084 CCDC180Q9P1Z9 1646 aa6.43□□□□□ -1.38
CFTR-201ENST00000003084 FKBP8Q14318 412 aa6.42□□□□□ -1.38
CFTR-201ENST00000003084 RANGAP1P46060 587 aaPredicted RBP6.42□□□□□ -1.38
CFTR-201ENST00000003084 PELP1Q8IZL8 1130 aaKnown RBP6.42□□□□□ -1.38
CFTR-201ENST00000003084 CIZ1Q9ULV3 898 aaPredicted RBP6.41□□□□□ -1.38
CFTR-201ENST00000003084 ZEB1P37275 1124 aaPredicted RBP6.39□□□□□ -1.39
CFTR-201ENST00000003084 CLEC11AQ9Y240 323 aa6.38□□□□□ -1.39
CFTR-201ENST00000003084 G3V3G9 751 aa6.38□□□□□ -1.39
CFTR-201ENST00000003084 DCAF8Q5TAQ9 597 aa6.38□□□□□ -1.39
CFTR-201ENST00000003084 PABPN1Q86U42 306 aaKnown RBP eCLIP6.37□□□□□ -1.39
CFTR-201ENST00000003084 TTBK1Q5TCY1 1321 aaPredicted RBP6.36□□□□□ -1.39
CFTR-201ENST00000003084 FOXD4L1Q9NU39 408 aa6.35□□□□□ -1.39
CFTR-201ENST00000003084 SLC24A1O60721 1099 aa6.33□□□□□ -1.4
CFTR-201ENST00000003084 ABCB7O75027 752 aa6.32□□□□□ -1.4
CFTR-201ENST00000003084 HAP1P54257 671 aaPredicted RBP6.31□□□□□ -1.4
CFTR-201ENST00000003084 GOLGA2Q08379 1002 aa6.31□□□□□ -1.4
CFTR-201ENST00000003084 MAPK8IP2Q13387 824 aaPredicted RBP6.31□□□□□ -1.4
CFTR-201ENST00000003084 CACNB1Q02641 598 aaPredicted RBP6.31□□□□□ -1.4
CFTR-201ENST00000003084 SAMD1Q6SPF0 538 aaPredicted RBP6.31□□□□□ -1.4
CFTR-201ENST00000003084 MIER1Q8N108 512 aa6.31□□□□□ -1.4
CFTR-201ENST00000003084 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.31□□□□□ -1.4
CFTR-201ENST00000003084 CCER1Q8TC90 406 aaPredicted RBP6.29□□□□□ -1.4
CFTR-201ENST00000003084 PCGF6Q9BYE7 350 aa6.29□□□□□ -1.4
CFTR-201ENST00000003084 ZCCHC6Q5VYS8 1495 aaKnown RBP6.29□□□□□ -1.4
CFTR-201ENST00000003084 TULP1O00294 542 aaPredicted RBP6.29□□□□□ -1.4
CFTR-201ENST00000003084 RB1CC1Q8TDY2 1594 aa6.28□□□□□ -1.4
CFTR-201ENST00000003084 NPM3O75607 178 aaKnown RBP6.26□□□□□ -1.41
CFTR-201ENST00000003084 SCRIBQ14160 1630 aa6.25□□□□□ -1.41
CFTR-201ENST00000003084 CFAP44Q96MT7 982 aa6.24□□□□□ -1.41
CFTR-201ENST00000003084 PAK3O75914 559 aaPredicted RBP6.23□□□□□ -1.41
CFTR-201ENST00000003084 NACADO15069 1562 aa6.22□□□□□ -1.41
CFTR-201ENST00000003084 FBXO3Q9UK99 471 aa6.21□□□□□ -1.42
CFTR-201ENST00000003084 TRIM26Q12899 539 aaPredicted RBP6.21□□□□□ -1.42
CFTR-201ENST00000003084 CENPBP07199 599 aaPredicted RBP6.19□□□□□ -1.42
CFTR-201ENST00000003084 MYCNP04198 464 aaPredicted RBP6.19□□□□□ -1.42
CFTR-201ENST00000003084 NBR1Q14596 966 aa6.17□□□□□ -1.42
CFTR-201ENST00000003084 WDR70Q9NW82 654 aa6.14□□□□□ -1.43
CFTR-201ENST00000003084 ITGAEP38570 1179 aa6.14□□□□□ -1.43
CFTR-201ENST00000003084 ZNF219Q9P2Y4 722 aaPredicted RBP6.13□□□□□ -1.43
CFTR-201ENST00000003084 PPARGC1BQ86YN6 1023 aaKnown RBP6.12□□□□□ -1.43
CFTR-201ENST00000003084 KRI1Q8N9T8 703 aaKnown RBP6.11□□□□□ -1.43
CFTR-201ENST00000003084 NEFLP07196 543 aa6.11□□□□□ -1.43
CFTR-201ENST00000003084 DCAF1Q9Y4B6 1507 aa6.1□□□□□ -1.43
CFTR-201ENST00000003084 ZNF692Q9BU19 519 aaPredicted RBP6.1□□□□□ -1.43
CFTR-201ENST00000003084 LOC105371045A0A1W2PR82 267 aa6.1□□□□□ -1.43
CFTR-201ENST00000003084 FAM50AQ14320 339 aaKnown RBP6.1□□□□□ -1.43
CFTR-201ENST00000003084 ZBTB12Q9Y330 459 aaPredicted RBP6.1□□□□□ -1.43
CFTR-201ENST00000003084 CDK11AQ9UQ88 783 aaPredicted RBP6.09□□□□□ -1.43
CFTR-201ENST00000003084 TAOK2Q9UL54 1235 aa6.08□□□□□ -1.44
CFTR-201ENST00000003084 CSRNP3Q8WYN3 585 aa6.07□□□□□ -1.44
CFTR-201ENST00000003084 TRIM52Q96A61 297 aa6.07□□□□□ -1.44
CFTR-201ENST00000003084 AMER1Q5JTC6 1135 aaPredicted RBP6.06□□□□□ -1.44
CFTR-201ENST00000003084 RNF216Q9NWF9 866 aaPredicted RBP6.06□□□□□ -1.44
CFTR-201ENST00000003084 ZBTB47Q9UFB7 747 aaPredicted RBP6.06□□□□□ -1.44
CFTR-201ENST00000003084 NPM1P06748 294 aaKnown RBP eCLIP6.05□□□□□ -1.44
CFTR-201ENST00000003084 ERICH6Q7L0X2 663 aa6.05□□□□□ -1.44
CFTR-201ENST00000003084 STAC3Q96MF2 364 aa6.04□□□□□ -1.44
CFTR-201ENST00000003084 POLR3GLQ9BT43 218 aa6.04□□□□□ -1.44
CFTR-201ENST00000003084 BAZ1BQ9UIG0 1483 aaKnown RBP6.04□□□□□ -1.44
CFTR-201ENST00000003084 SPDYE4A6NLX3 237 aa6.01□□□□□ -1.45
CFTR-201ENST00000003084 ECM2O94769 699 aaPredicted RBP6.01□□□□□ -1.45
CFTR-201ENST00000003084 POLA2Q14181 598 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms