RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Atp1b4Q99ME6 356 aa13.56□□□□□ -0.24
Usp4-209ENSMUST00000194959 Kiaa1551Q5DTW7 1521 aa13.56□□□□□ -0.24
Usp4-209ENSMUST00000194959 Cdk13Q69ZA1 1511 aaKnown RBP13.55□□□□□ -0.24
Usp4-209ENSMUST00000194959 Slc4a1apE9PX68 744 aa13.55□□□□□ -0.24
Usp4-209ENSMUST00000194959 Mug2P28666 1451 aa13.55□□□□□ -0.24
Usp4-209ENSMUST00000194959 Mlh3A0A1Y7VMP7 1443 aa13.55□□□□□ -0.24
Usp4-209ENSMUST00000194959 Ssh2Q5SW75 1423 aa13.55□□□□□ -0.24
Usp4-209ENSMUST00000194959 Supt6hQ62383 1726 aaKnown RBP13.55□□□□□ -0.24
Usp4-209ENSMUST00000194959 Myom3A2ABU4 1439 aa13.54□□□□□ -0.24
Usp4-209ENSMUST00000194959 Apbb1Q9QXJ1 710 aa13.54□□□□□ -0.24
Usp4-209ENSMUST00000194959 Kif14L0N7N1 1674 aaKnown RBP13.54□□□□□ -0.24
Usp4-209ENSMUST00000194959 Mapkbp1Q6NS57 1503 aa13.54□□□□□ -0.24
Usp4-209ENSMUST00000194959 Arhgef12Q8R4H2 1543 aaKnown RBP13.54□□□□□ -0.24
Usp4-209ENSMUST00000194959 Fan1Q69ZT1 1020 aa13.53□□□□□ -0.24
Usp4-209ENSMUST00000194959 Rock2P70336 1388 aa13.53□□□□□ -0.24
Usp4-209ENSMUST00000194959 Fancd2Q80V62 1450 aa13.53□□□□□ -0.24
Usp4-209ENSMUST00000194959 Plekhg5Q66T02 1073 aa13.52□□□□□ -0.24
Usp4-209ENSMUST00000194959 Srcin1Q9QWI6 1250 aa13.52□□□□□ -0.25
Usp4-209ENSMUST00000194959 Lemd3Q9WU40 921 aa13.51□□□□□ -0.25
Usp4-209ENSMUST00000194959 Rusc2Q80U22 1514 aa13.51□□□□□ -0.25
Usp4-209ENSMUST00000194959 Nlrp6Q91WS2 869 aa13.51□□□□□ -0.25
Usp4-209ENSMUST00000194959 Supt16hQ920B9 1047 aa13.51□□□□□ -0.25
Usp4-209ENSMUST00000194959 Esx1O88933 382 aa13.5□□□□□ -0.25
Usp4-209ENSMUST00000194959 Zscan21Q07231 555 aa13.5□□□□□ -0.25
Usp4-209ENSMUST00000194959 Neurod2Q62414 383 aa13.5□□□□□ -0.25
Usp4-209ENSMUST00000194959 Plppr3Q7TPB0 716 aa13.5□□□□□ -0.25
Usp4-209ENSMUST00000194959 L3mbtl2P59178 703 aa13.5□□□□□ -0.25
Usp4-209ENSMUST00000194959 Srpk2O54781 681 aaKnown RBP13.49□□□□□ -0.25
Usp4-209ENSMUST00000194959 CrbnQ8C7D2 445 aa13.49□□□□□ -0.25
Usp4-209ENSMUST00000194959 Pprc1Q6NZN1 1644 aa13.49□□□□□ -0.25
Usp4-209ENSMUST00000194959 Atp7aQ64430 1491 aa13.49□□□□□ -0.25
Usp4-209ENSMUST00000194959 NeflP08551 543 aa13.49□□□□□ -0.25
Usp4-209ENSMUST00000194959 Fhod3Q76LL6 1578 aa13.49□□□□□ -0.25
Usp4-209ENSMUST00000194959 Pbrm1Q8BSQ9 1634 aaKnown RBP13.48□□□□□ -0.25
Usp4-209ENSMUST00000194959 Caskin1Q6P9K8 1431 aa13.48□□□□□ -0.25
Usp4-209ENSMUST00000194959 Setbp1Q9Z180 1582 aa13.48□□□□□ -0.25
Usp4-209ENSMUST00000194959 Rangap1P46061 589 aaKnown RBP13.47□□□□□ -0.25
Usp4-209ENSMUST00000194959 Znf608Q56A10 1511 aa13.46□□□□□ -0.25
Usp4-209ENSMUST00000194959 Atp10dQ8K2X1 1416 aa13.46□□□□□ -0.25
Usp4-209ENSMUST00000194959 Ttbk1Q6PCN3 1308 aa13.46□□□□□ -0.26
Usp4-209ENSMUST00000194959 Pak3Q61036 559 aa13.45□□□□□ -0.26
Usp4-209ENSMUST00000194959 Dcaf11Q91VU6 549 aa13.44□□□□□ -0.26
Usp4-209ENSMUST00000194959 Dnmt1P13864 1620 aaKnown RBP13.44□□□□□ -0.26
Usp4-209ENSMUST00000194959 Zscan10Q3URR7 782 aa13.44□□□□□ -0.26
Usp4-209ENSMUST00000194959 Polr3glQ8R0C0 218 aa13.44□□□□□ -0.26
Usp4-209ENSMUST00000194959 Tmf1B9EKI3 1091 aa13.44□□□□□ -0.26
Usp4-209ENSMUST00000194959 Map3k4O08648 1597 aa13.43□□□□□ -0.26
Usp4-209ENSMUST00000194959 Mak16Q8BGS0 296 aaKnown RBP13.43□□□□□ -0.26
Usp4-209ENSMUST00000194959 PrxO55103 1391 aa13.42□□□□□ -0.26
Usp4-209ENSMUST00000194959 Zfp444Q3TDV8 331 aaKnown RBP13.42□□□□□ -0.26
Usp4-209ENSMUST00000194959 Stk26Q99JT2 416 aa13.42□□□□□ -0.26
Usp4-209ENSMUST00000194959 Gtf2e1Q9D0D5 440 aa13.42□□□□□ -0.26
Usp4-209ENSMUST00000194959 Naip6Q9JIB6 1403 aa13.42□□□□□ -0.26
Usp4-209ENSMUST00000194959 Polr3aB2RXC6 1390 aa13.41□□□□□ -0.26
Usp4-209ENSMUST00000194959 Usp40Q8BWR4 1235 aa13.41□□□□□ -0.26
Usp4-209ENSMUST00000194959 Trim26Q99PN3 545 aa13.41□□□□□ -0.26
Usp4-209ENSMUST00000194959 Prdm16A2A935 1275 aa13.41□□□□□ -0.26
Usp4-209ENSMUST00000194959 Abcc1O35379 1528 aa13.4□□□□□ -0.26
Usp4-209ENSMUST00000194959 Stag3O70576 1240 aa13.4□□□□□ -0.26
Usp4-209ENSMUST00000194959 Ythdc2B2RR83 1445 aaKnown RBP13.4□□□□□ -0.26
Usp4-209ENSMUST00000194959 Zcchc11B2RX14 1644 aaKnown RBP13.39□□□□□ -0.27
Usp4-209ENSMUST00000194959 Dbr1Q923B1 550 aa13.39□□□□□ -0.27
Usp4-209ENSMUST00000194959 Lrrc9Q8CDN9 1456 aa13.39□□□□□ -0.27
Usp4-209ENSMUST00000194959 B4galnt3Q6L8S8 986 aa13.38□□□□□ -0.27
Usp4-209ENSMUST00000194959 RalgapbQ8BQZ4 1484 aa13.38□□□□□ -0.27
Usp4-209ENSMUST00000194959 PtprgQ05909 1442 aa13.38□□□□□ -0.27
Usp4-209ENSMUST00000194959 Asxl1P59598 1514 aa13.37□□□□□ -0.27
Usp4-209ENSMUST00000194959 Fam184bQ0KK56 942 aa13.37□□□□□ -0.27
Usp4-209ENSMUST00000194959 AI481877A2ALV5 1481 aa13.36□□□□□ -0.27
Usp4-209ENSMUST00000194959 Tcerg1Q8CGF7 1100 aaKnown RBP13.36□□□□□ -0.27
Usp4-209ENSMUST00000194959 Speer4f1Q9D5Q6 258 aa13.36□□□□□ -0.27
Usp4-209ENSMUST00000194959 Lamc1P02468 1607 aaKnown RBP13.35□□□□□ -0.27
Usp4-209ENSMUST00000194959 Tarbp1E9Q368 1579 aa13.35□□□□□ -0.27
Usp4-209ENSMUST00000194959 Fam208aQ69ZR9 1610 aaKnown RBP13.35□□□□□ -0.27
Usp4-209ENSMUST00000194959 Hdac5Q9Z2V6 1113 aa13.34□□□□□ -0.27
Usp4-209ENSMUST00000194959 Kif7B7ZNG0 1348 aa13.34□□□□□ -0.27
Usp4-209ENSMUST00000194959 Dot1lQ6XZL8 1540 aa13.34□□□□□ -0.27
Usp4-209ENSMUST00000194959 Mbd5B1AYB6 1498 aa13.34□□□□□ -0.27
Usp4-209ENSMUST00000194959 Ppp2r1aQ76MZ3 589 aa13.33□□□□□ -0.27
Usp4-209ENSMUST00000194959 Fmn2Q9JL04 1578 aa13.33□□□□□ -0.28
Usp4-209ENSMUST00000194959 Zranb1Q7M760 708 aa13.33□□□□□ -0.28
Usp4-209ENSMUST00000194959 Ttc21bQ0HA38 1315 aa13.33□□□□□ -0.28
Usp4-209ENSMUST00000194959 Rock1P70335 1354 aa13.32□□□□□ -0.28
Usp4-209ENSMUST00000194959 Adgrl2Q8JZZ7 1487 aa13.32□□□□□ -0.28
Usp4-209ENSMUST00000194959 Nsd2Q8BVE8 1365 aa13.32□□□□□ -0.28
Usp4-209ENSMUST00000194959 Pabpn1Q8CCS6 302 aaKnown RBP13.32□□□□□ -0.28
Usp4-209ENSMUST00000194959 Senp3Q9EP97 568 aaKnown RBP13.32□□□□□ -0.28
Usp4-209ENSMUST00000194959 Trpm2Q91YD4 1506 aa13.31□□□□□ -0.28
Usp4-209ENSMUST00000194959 Eif4g3Q80XI3 1579 aaKnown RBP13.31□□□□□ -0.28
Usp4-209ENSMUST00000194959 Cpsf1Q9EPU4 1441 aaKnown RBP13.31□□□□□ -0.28
Usp4-209ENSMUST00000194959 Erbb3Q61526 1339 aa13.31□□□□□ -0.28
Usp4-209ENSMUST00000194959 ErbinQ80TH2 1402 aa13.31□□□□□ -0.28
Usp4-209ENSMUST00000194959 ArxO35085 564 aa13.31□□□□□ -0.28
Usp4-209ENSMUST00000194959 Rrbp1Q99PL5 1605 aaKnown RBP13.31□□□□□ -0.28
Usp4-209ENSMUST00000194959 Puf60Q3UEB3 564 aaKnown RBP13.3□□□□□ -0.28
Usp4-209ENSMUST00000194959 Ppp1r18Q8BQ30 594 aa13.29□□□□□ -0.28
Usp4-209ENSMUST00000194959 Edc4Q3UJB9 1406 aaKnown RBP13.29□□□□□ -0.28
Usp4-209ENSMUST00000194959 Exosc9Q9JHI7 438 aaKnown RBP13.29□□□□□ -0.28
Usp4-209ENSMUST00000194959 Liat1Q810M6 228 aa13.28□□□□□ -0.28
Usp4-209ENSMUST00000194959 Armcx1Q9CX83 456 aa13.27□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 86.9 ms