RNA–Protein interactions for RNA: ENSMUST00000113717.7

Sptan1-204, Transcript of Spectrin alpha chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptan1, Length 7,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1-204ENSMUST00000113717 Casq1O09165 405 aa13.41□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Taf3Q5HZG4 932 aa13.41□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Ccdc88bQ4QRL3 1481 aa13.41□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Mical1Q8VDP3 1048 aa13.41□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Ccdc47Q9D024 483 aaKnown RBP13.4□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Plekhh2Q8C115 1491 aa13.39□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Tpm1P58771 284 aa13.39□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Nap1l3Q794H2 544 aa13.39□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Chmp3Q9CQ10 224 aa13.39□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Sh3bgrQ9WUZ7 214 aa13.39□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Utp3Q9JI13 469 aaKnown RBP13.38□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Ccdc146E9Q9F7 977 aa13.38□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Stard8Q8K031 1019 aa13.38□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Senp3Q9EP97 568 aaKnown RBP13.37□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Nup155Q99P88 1391 aaKnown RBP13.36□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Slc4a1apE9PX68 744 aa13.36□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Pknox2Q8BG99 474 aa13.36□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Rpap1Q80TE0 1409 aa13.36□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Kdm5dQ62240 1548 aa13.36□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Pibf1E9Q6K3 756 aa13.35□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Ccdc34Q3UI66 367 aa13.35□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Tpm4Q6IRU2 248 aa13.35□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Psme1P97371 249 aa13.34□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Tpm2P58774 284 aa13.34□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Rock1P70335 1354 aa13.34□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Gabpb2P81069 414 aa13.33□□□□□ -0.27
Sptan1-204ENSMUST00000113717 Gripap1Q8VD04 806 aa13.33□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Slc4a10Q5DTL9 1118 aa13.33□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Zrsr2Q62377 462 aaKnown RBP13.33□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Tsen2Q6P7W5 460 aa13.33□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Gm21969J3QJZ1 289 aa13.33□□□□□ -0.28
Sptan1-204ENSMUST00000113717 HdgfP51859 237 aaKnown RBP13.32□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Rfx1P48377 963 aa13.32□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Tomm22Q9CPQ3 142 aa13.32□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Kif4P33174 1231 aa13.32□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Lemd3Q9WU40 921 aa13.32□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Isy1Q69ZQ2 285 aaKnown RBP13.31□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Usp47Q8BY87 1376 aa13.31□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Ccdc60Q8C4J0 545 aa13.31□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Pank3Q8R2W9 370 aa13.31□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Ralbp1Q62172 648 aa13.3□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Srek1Q8BZX4 494 aaKnown RBP13.3□□□□□ -0.28
Sptan1-204ENSMUST00000113717 CenpjQ569L8 1344 aa13.3□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Drc7Q6V3W6 876 aa13.3□□□□□ -0.28
Sptan1-204ENSMUST00000113717 KinQ8K339 391 aa13.3□□□□□ -0.28
Sptan1-204ENSMUST00000113717 UacaQ8CGB3 1411 aa13.3□□□□□ -0.28
Sptan1-204ENSMUST00000113717 AampJ3QN89 436 aa13.3□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Sox12Q04890 314 aa13.3□□□□□ -0.28
Sptan1-204ENSMUST00000113717 AknaQ80VW7 1404 aa13.3□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Rabep1O35551 862 aa13.3□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Kif16bB1AVY7 1312 aa13.29□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Noc3lQ8VI84 807 aaKnown RBP13.29□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Ak7Q9D2H2 614 aa13.29□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Ipo7Q9EPL8 1038 aaKnown RBP13.29□□□□□ -0.28
Sptan1-204ENSMUST00000113717 A0A1L1SQF0 893 aa13.29□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Eif2s2Q99L45 331 aaKnown RBP13.29□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Pdcl3Q8BVF2 240 aa13.29□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Dhx57Q6P5D3 1388 aaKnown RBP13.29□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Q8BT18 775 aa13.29□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Arid4aF8VPQ2 1261 aaKnown RBP13.28□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Txndc2Q6P902 515 aa13.28□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Vps53Q8CCB4 832 aa13.28□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Cplx2P84086 134 aa13.28□□□□□ -0.28
Sptan1-204ENSMUST00000113717 BccipQ9CWI3 316 aa13.28□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Krt82Q99M74 516 aa13.28□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Stk31Q99MW1 1018 aa13.28□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Kri1Q8VDQ9 704 aaKnown RBP13.27□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Evc2Q8K1G2 1220 aa13.27□□□□□ -0.28
Sptan1-204ENSMUST00000113717 Anp32eP97822 260 aaKnown RBP13.27□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Ppp1r18Q8BQ30 594 aa13.27□□□□□ -0.29
Sptan1-204ENSMUST00000113717 G3bp1P97855 465 aaKnown RBP13.26□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Hmgn5Q9JL35 406 aa13.26□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Fan1Q69ZT1 1020 aa13.26□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Dusp9Q7TNL7 452 aa13.26□□□□□ -0.29
Sptan1-204ENSMUST00000113717 GsdmaQ9EST1 446 aa13.26□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Hook1Q8BIL5 728 aa13.26□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Bicd2Q921C5 820 aa13.26□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Polr3gQ6NXY9 223 aa13.25□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Trim58Q5NCC9 485 aa13.25□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Dixdc1Q80Y83 711 aa13.25□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Znhit6Q3UFB2 460 aaKnown RBP13.25□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Ccdc173A0JLY1 547 aa13.24□□□□□ -0.29
Sptan1-204ENSMUST00000113717 EzrP26040 586 aaKnown RBP13.24□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Kif3bQ61771 747 aa13.24□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Pnmal2G3X9N3 661 aa13.23□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Rnf20Q5DTM8 973 aa13.23□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Arid3cA6PWV5 409 aa13.23□□□□□ -0.29
Sptan1-204ENSMUST00000113717 IbspQ61711 324 aa13.23□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Tceal9Q9DD24 104 aa13.23□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Ddx11Q6AXC6 880 aa13.23□□□□□ -0.29
Sptan1-204ENSMUST00000113717 AppP12023 770 aa13.23□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Rufy1Q8BIJ7 712 aa13.23□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Inpp5dQ9ES52 1191 aa13.23□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Samd1D3YXK1 519 aa13.22□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Gcom1E9PZ54 550 aa13.22□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Cplx1P63040 134 aa13.22□□□□□ -0.29
Sptan1-204ENSMUST00000113717 MyzapQ3UIJ9 466 aa13.22□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Atl3Q91YH5 541 aa13.22□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Ggt6Q6PDE7 497 aa13.22□□□□□ -0.29
Sptan1-204ENSMUST00000113717 Rec8Q8C5S7 591 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms