RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Srek1Q8BZX4 494 aaKnown RBP8.1□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Clstn1Q9EPL2 979 aa8.09□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Mre11Q61216 706 aa8.09□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Spryd3E9Q9B3 442 aa8.09□□□□□ -1.11
Scn1a-201ENSMUST00000077489 A0A1L1SQF0 893 aa8.08□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Map7d2A2AG50 781 aa8.08□□□□□ -1.12
Scn1a-201ENSMUST00000077489 SafbD3YXK2 937 aaKnown RBP8.08□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Rock1P70335 1354 aa8.07□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Usp47Q8BY87 1376 aa8.07□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Stk26Q99JT2 416 aa8.07□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Tpm3P21107 285 aaKnown RBP8.06□□□□□ -1.12
Scn1a-201ENSMUST00000077489 CgnP59242 1191 aa8.06□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Tmco5bQ80X59 307 aa8.06□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Pknox2Q8BG99 474 aa8.06□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Tpm2P58774 284 aa8.06□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Ksr2Q3UVC0 959 aa8.06□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Kiaa0754Q69ZZ9 979 aa8.06□□□□□ -1.12
Scn1a-201ENSMUST00000077489 St18Q80TY4 1045 aa8.06□□□□□ -1.12
Scn1a-201ENSMUST00000077489 VgfQ0VGU4 617 aa8.05□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Kif16bB1AVY7 1312 aa8.05□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Tpd52l1O54818 204 aa8.05□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Znf316Q6PGE4 1016 aa8.05□□□□□ -1.12
Scn1a-201ENSMUST00000077489 KinQ8K339 391 aa8.05□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Trim30aP15533 496 aa8.05□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Ralbp1Q62172 648 aa8.05□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Slc4a3P16283 1227 aa8.05□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Stk31Q99MW1 1018 aa8.05□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Birc3O08863 600 aa8.05□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Ddx11Q6AXC6 880 aa8.05□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Tpm4Q6IRU2 248 aa8.05□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Vps8Q0P5W1 1427 aa8.04□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Nsd2Q8BVE8 1365 aa8.04□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Gprasp1Q5U4C1 1347 aa8.04□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Sin3aQ60520 1274 aaKnown RBP8.04□□□□□ -1.12
Scn1a-201ENSMUST00000077489 CrbnQ8C7D2 445 aa8.04□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Evc2Q8K1G2 1220 aa8.04□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Txndc2Q6P902 515 aa8.04□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Ush1cQ9ES64 910 aa8.04□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Kif3bQ61771 747 aa8.04□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Slc4a1apE9PX68 744 aa8.03□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Casq1O09165 405 aa8.03□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Nap1l3Q794H2 544 aa8.03□□□□□ -1.12
Scn1a-201ENSMUST00000077489 LrpprcQ6PB66 1392 aaKnown RBP8.03□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Tpm1P58771 284 aa8.03□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Tsen2Q6P7W5 460 aa8.03□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Cluap1Q8R3P7 413 aa8.03□□□□□ -1.12
Scn1a-201ENSMUST00000077489 Ap3b2Q9JME5 1082 aa8.02□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Sf3a1Q8K4Z5 791 aaKnown RBP8.02□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Ccer1Q9CQL2 403 aa8.02□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Pank3Q8R2W9 370 aa8.02□□□□□ -1.13
Scn1a-201ENSMUST00000077489 GsdmaQ9EST1 446 aa8.02□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Cc2d2bA0A286YDU8 1405 aa8.01□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Smc4Q8CG47 1286 aa8.01□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Kif3aP28741 701 aa8.01□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Ccdc34Q3UI66 367 aa8.01□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Brpf1B2RRD7 1212 aa8.01□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Filip1lQ6P6L0 1131 aa8.01□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Hmgn5Q9JL35 406 aa8.01□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Fam184bQ0KK56 942 aa8.01□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Hook1Q8BIL5 728 aa8.01□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Atl3Q91YH5 541 aa8.01□□□□□ -1.13
Scn1a-201ENSMUST00000077489 ErbinQ80TH2 1402 aa8.01□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Dapk1Q80YE7 1442 aa8□□□□□ -1.13
Scn1a-201ENSMUST00000077489 PhaxQ9JJT9 385 aaKnown RBP8□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Sart1Q9Z315 806 aaKnown RBP8□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Tnnt1O88346 262 aa8□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Cecr2E9Q2Z1 1453 aa8□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Kif7B7ZNG0 1348 aa8□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Ccdc173A0JLY1 547 aa8□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Trim58Q5NCC9 485 aa8□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Iqgap2Q3UQ44 1575 aa7.99□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Rabep1O35551 862 aa7.99□□□□□ -1.13
Scn1a-201ENSMUST00000077489 G3bp1P97855 465 aaKnown RBP7.99□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Znf330Q922H9 316 aa7.99□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Ipo7Q9EPL8 1038 aaKnown RBP7.99□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Chmp3Q9CQ10 224 aa7.99□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Shroom4Q1W617 1475 aa7.99□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Gsdma3Q5Y4Y6 464 aa7.99□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Kif4P33174 1231 aa7.99□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Cetn4Q8K4K1 168 aa7.99□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Rnf20Q5DTM8 973 aa7.99□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Hoxa7P02830 229 aa7.98□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Top2aQ01320 1528 aaKnown RBP7.98□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Cplx2P84086 134 aa7.98□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Fan1Q69ZT1 1020 aa7.98□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Tceal9Q9DD24 104 aa7.98□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Arid3cA6PWV5 409 aa7.98□□□□□ -1.13
Scn1a-201ENSMUST00000077489 GorabQ8BRM2 368 aa7.98□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Usp40Q8BWR4 1235 aa7.98□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Mcm2P97310 904 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Ccdc60Q8C4J0 545 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Zrsr2Q62377 462 aaKnown RBP7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 SlkO54988 1233 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Chmp4cQ9D7F7 232 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Ccdc146E9Q9F7 977 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Gm21969J3QJZ1 289 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Prdm16A2A935 1275 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Plekhh1Q80TI1 1356 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Odf2A3KGV1 830 aaKnown RBP7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Gnai1B2RSH2 354 aa7.97□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms