RNA–Protein interactions for RNA: ENSMUST00000063607.11

Knop1-202, Transcript of Lysine-rich nucleolar protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Knop1, Length 4,884 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knop1-202ENSMUST00000063607 Mapk8ip3Q9ESN9 1337 aa13.67□□□□□ -0.22
Knop1-202ENSMUST00000063607 Ftsj3Q9DBE9 838 aaKnown RBP13.67□□□□□ -0.22
Knop1-202ENSMUST00000063607 KnstrnQ9D9Z1 312 aaKnown RBP13.66□□□□□ -0.22
Knop1-202ENSMUST00000063607 Kcnj4P52189 445 aa13.66□□□□□ -0.22
Knop1-202ENSMUST00000063607 Rsph3aQ3UFY4 516 aa13.66□□□□□ -0.22
Knop1-202ENSMUST00000063607 Fmn1Q05860 1466 aa13.66□□□□□ -0.22
Knop1-202ENSMUST00000063607 NudcO35685 332 aaKnown RBP13.65□□□□□ -0.22
Knop1-202ENSMUST00000063607 Tex2Q6ZPJ0 1128 aaKnown RBP13.65□□□□□ -0.22
Knop1-202ENSMUST00000063607 Rwdd1Q9CQK7 243 aa13.65□□□□□ -0.22
Knop1-202ENSMUST00000063607 Ak7Q9D2H2 614 aa13.65□□□□□ -0.22
Knop1-202ENSMUST00000063607 IqubQ8CDK3 788 aa13.65□□□□□ -0.22
Knop1-202ENSMUST00000063607 Exosc9Q9JHI7 438 aaKnown RBP13.65□□□□□ -0.22
Knop1-202ENSMUST00000063607 Ssr1Q9CY50 286 aaKnown RBP13.64□□□□□ -0.23
Knop1-202ENSMUST00000063607 Fez1Q8K0X8 392 aa13.64□□□□□ -0.23
Knop1-202ENSMUST00000063607 Anapc15-psA0A140T8L6 141 aa13.63□□□□□ -0.23
Knop1-202ENSMUST00000063607 Baz1bQ9Z277 1479 aa13.63□□□□□ -0.23
Knop1-202ENSMUST00000063607 Isy1Q69ZQ2 285 aaKnown RBP13.63□□□□□ -0.23
Knop1-202ENSMUST00000063607 Tpd52l1O54818 204 aa13.63□□□□□ -0.23
Knop1-202ENSMUST00000063607 Cabp1Q9JLK7 227 aa13.63□□□□□ -0.23
Knop1-202ENSMUST00000063607 Slc4a1apE9PX68 744 aa13.62□□□□□ -0.23
Knop1-202ENSMUST00000063607 Cnga1P29974 684 aa13.62□□□□□ -0.23
Knop1-202ENSMUST00000063607 Ecm2Q5FW85 670 aa13.62□□□□□ -0.23
Knop1-202ENSMUST00000063607 Sh3bp5Q9Z131 463 aa13.62□□□□□ -0.23
Knop1-202ENSMUST00000063607 PdiltQ9DAN1 588 aa13.62□□□□□ -0.23
Knop1-202ENSMUST00000063607 Map4P27546 1125 aaKnown RBP13.61□□□□□ -0.23
Knop1-202ENSMUST00000063607 Crybg2B7ZCC2 1516 aa13.61□□□□□ -0.23
Knop1-202ENSMUST00000063607 Fez2Q6TYB5 348 aa13.61□□□□□ -0.23
Knop1-202ENSMUST00000063607 Chrna2Q91X60 512 aa13.61□□□□□ -0.23
Knop1-202ENSMUST00000063607 Rundc1Q0VDN7 615 aa13.6□□□□□ -0.23
Knop1-202ENSMUST00000063607 Eif2s2Q99L45 331 aaKnown RBP13.6□□□□□ -0.23
Knop1-202ENSMUST00000063607 PnnO35691 725 aaKnown RBP13.59□□□□□ -0.23
Knop1-202ENSMUST00000063607 Trak1Q6PD31 939 aa13.59□□□□□ -0.23
Knop1-202ENSMUST00000063607 Glipr1l2Q9CQ35 332 aa13.59□□□□□ -0.23
Knop1-202ENSMUST00000063607 Mfap1aC0HKD8 439 aaKnown RBP13.59□□□□□ -0.23
Knop1-202ENSMUST00000063607 Mfap1bC0HKD9 439 aaKnown RBP13.59□□□□□ -0.23
Knop1-202ENSMUST00000063607 Cers3Q1A3B0 383 aa13.59□□□□□ -0.23
Knop1-202ENSMUST00000063607 Gse1Q3U3C9 1213 aa13.58□□□□□ -0.23
Knop1-202ENSMUST00000063607 Exoc6Q8R313 802 aa13.58□□□□□ -0.23
Knop1-202ENSMUST00000063607 Lemd3Q9WU40 921 aa13.58□□□□□ -0.24
Knop1-202ENSMUST00000063607 Dhx29Q6PGC1 1365 aaKnown RBP13.58□□□□□ -0.24
Knop1-202ENSMUST00000063607 Smarca2Q6DIC0 1577 aa13.58□□□□□ -0.24
Knop1-202ENSMUST00000063607 Ccdc173A0JLY1 547 aa13.58□□□□□ -0.24
Knop1-202ENSMUST00000063607 LrpprcQ6PB66 1392 aaKnown RBP13.57□□□□□ -0.24
Knop1-202ENSMUST00000063607 Synj1Q8CHC4 1574 aa13.56□□□□□ -0.24
Knop1-202ENSMUST00000063607 Mphosph9A6H5Y1 991 aa13.56□□□□□ -0.24
Knop1-202ENSMUST00000063607 Stag3O70576 1240 aa13.56□□□□□ -0.24
Knop1-202ENSMUST00000063607 Arglu1Q3UL36 271 aaKnown RBP13.56□□□□□ -0.24
Knop1-202ENSMUST00000063607 Pabpn1Q8CCS6 302 aaKnown RBP13.56□□□□□ -0.24
Knop1-202ENSMUST00000063607 Trap1aP19473 224 aa13.56□□□□□ -0.24
Knop1-202ENSMUST00000063607 NcapgE9PWG6 1004 aa13.55□□□□□ -0.24
Knop1-202ENSMUST00000063607 Fam114a1Q9D281 569 aa13.55□□□□□ -0.24
Knop1-202ENSMUST00000063607 Gtpbp4Q99ME9 634 aaKnown RBP13.55□□□□□ -0.24
Knop1-202ENSMUST00000063607 PogkQ80TC5 607 aa13.54□□□□□ -0.24
Knop1-202ENSMUST00000063607 Rapgef2Q8CHG7 1496 aa13.54□□□□□ -0.24
Knop1-202ENSMUST00000063607 Stk26Q99JT2 416 aa13.54□□□□□ -0.24
Knop1-202ENSMUST00000063607 EzrP26040 586 aaKnown RBP13.53□□□□□ -0.24
Knop1-202ENSMUST00000063607 Znf710Q3U288 666 aa13.53□□□□□ -0.24
Knop1-202ENSMUST00000063607 Ifit1bl1D3Z6F0 470 aa13.52□□□□□ -0.24
Knop1-202ENSMUST00000063607 Hsp90b1P08113 802 aaKnown RBP13.52□□□□□ -0.24
Knop1-202ENSMUST00000063607 Sycp1Q62209 993 aa13.52□□□□□ -0.24
Knop1-202ENSMUST00000063607 1700019A02RikA0A087WPV9 146 aa13.52□□□□□ -0.25
Knop1-202ENSMUST00000063607 Trerf1Q8BXJ2 1205 aa13.52□□□□□ -0.25
Knop1-202ENSMUST00000063607 Dixdc1Q80Y83 711 aa13.51□□□□□ -0.25
Knop1-202ENSMUST00000063607 Kif3bQ61771 747 aa13.51□□□□□ -0.25
Knop1-202ENSMUST00000063607 Fyco1Q8VDC1 1437 aa13.51□□□□□ -0.25
Knop1-202ENSMUST00000063607 NmiO35309 314 aa13.51□□□□□ -0.25
Knop1-202ENSMUST00000063607 Gripap1Q8VD04 806 aa13.51□□□□□ -0.25
Knop1-202ENSMUST00000063607 Dnajc5bQ9CQ94 199 aa13.51□□□□□ -0.25
Knop1-202ENSMUST00000063607 Cdkn1cP49919 348 aa13.5□□□□□ -0.25
Knop1-202ENSMUST00000063607 MccE9PWI3 1003 aa13.5□□□□□ -0.25
Knop1-202ENSMUST00000063607 Ctr9Q62018 1173 aaKnown RBP13.5□□□□□ -0.25
Knop1-202ENSMUST00000063607 Ccdc83Q9D4V3 305 aa13.5□□□□□ -0.25
Knop1-202ENSMUST00000063607 Smarca4Q3TKT4 1613 aaKnown RBP13.49□□□□□ -0.25
Knop1-202ENSMUST00000063607 Sf3a1Q8K4Z5 791 aaKnown RBP13.49□□□□□ -0.25
Knop1-202ENSMUST00000063607 Utp3Q9JI13 469 aaKnown RBP13.48□□□□□ -0.25
Knop1-202ENSMUST00000063607 Tpm3P21107 285 aaKnown RBP13.48□□□□□ -0.25
Knop1-202ENSMUST00000063607 Mns1Q61884 491 aa13.48□□□□□ -0.25
Knop1-202ENSMUST00000063607 CgnP59242 1191 aa13.47□□□□□ -0.25
Knop1-202ENSMUST00000063607 Tmx4Q8C0L0 335 aa13.47□□□□□ -0.25
Knop1-202ENSMUST00000063607 Hmgb1P63158 215 aaKnown RBP13.47□□□□□ -0.25
Knop1-202ENSMUST00000063607 Fhad1A6PWD2 1420 aa13.47□□□□□ -0.25
Knop1-202ENSMUST00000063607 Kif4P33174 1231 aa13.47□□□□□ -0.25
Knop1-202ENSMUST00000063607 CntlnA2AM05 1397 aa13.46□□□□□ -0.25
Knop1-202ENSMUST00000063607 Sart1Q9Z315 806 aaKnown RBP13.46□□□□□ -0.25
Knop1-202ENSMUST00000063607 Lekr1B2RVN1 116 aa13.46□□□□□ -0.25
Knop1-202ENSMUST00000063607 Ubap1lG3UW59 384 aa13.46□□□□□ -0.26
Knop1-202ENSMUST00000063607 Speer4f1Q9D5Q6 258 aa13.46□□□□□ -0.26
Knop1-202ENSMUST00000063607 Zscan21Q07231 555 aa13.45□□□□□ -0.26
Knop1-202ENSMUST00000063607 OptnQ8K3K8 584 aa13.45□□□□□ -0.26
Knop1-202ENSMUST00000063607 Ube2q2Q8K2Z8 378 aa13.45□□□□□ -0.26
Knop1-202ENSMUST00000063607 Tpm3-rs7D3Z2H9 248 aa13.44□□□□□ -0.26
Knop1-202ENSMUST00000063607 Txndc2Q6P902 515 aa13.44□□□□□ -0.26
Knop1-202ENSMUST00000063607 Drc7Q6V3W6 876 aa13.44□□□□□ -0.26
Knop1-202ENSMUST00000063607 Ca8P28651 291 aa13.44□□□□□ -0.26
Knop1-202ENSMUST00000063607 Dnajc2P54103 621 aaKnown RBP13.44□□□□□ -0.26
Knop1-202ENSMUST00000063607 Znhit6Q3UFB2 460 aaKnown RBP13.44□□□□□ -0.26
Knop1-202ENSMUST00000063607 Arhgap35Q91YM2 1499 aa13.44□□□□□ -0.26
Knop1-202ENSMUST00000063607 Ccdc94Q9D6J3 314 aa13.44□□□□□ -0.26
Knop1-202ENSMUST00000063607 Washc2Q6PGL7 1334 aa13.43□□□□□ -0.26
Knop1-202ENSMUST00000063607 Rnf214Q8BFU3 668 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms