RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Ttbk1Q6PCN3 1308 aa29.55■■■□□ 2.32
Ccdc9-201ENSMUST00000041010 Trappc8E9PWG2 1437 aa29.55■■■□□ 2.32
Ccdc9-201ENSMUST00000041010 Mphosph9A6H5Y1 991 aa29.54■■■□□ 2.32
Ccdc9-201ENSMUST00000041010 Trpm2Q91YD4 1506 aa29.53■■■□□ 2.32
Ccdc9-201ENSMUST00000041010 Ipo9Q91YE6 1041 aa29.5■■■□□ 2.31
Ccdc9-201ENSMUST00000041010 Kidins220E9Q9B7 1793 aa29.49■■■□□ 2.31
Ccdc9-201ENSMUST00000041010 Cdc42bpbQ7TT50 1713 aa29.48■■■□□ 2.31
Ccdc9-201ENSMUST00000041010 Gtf3c3Q3TMP1 882 aa29.48■■■□□ 2.31
Ccdc9-201ENSMUST00000041010 Zfyve16Q80U44 1528 aa29.48■■■□□ 2.31
Ccdc9-201ENSMUST00000041010 Mrs2Q5NCE8 434 aa29.47■■■□□ 2.31
Ccdc9-201ENSMUST00000041010 Slc4a2P13808 1237 aaKnown RBP29.45■■■□□ 2.31
Ccdc9-201ENSMUST00000041010 Zfp644E9QA22 1323 aa29.43■■■□□ 2.3
Ccdc9-201ENSMUST00000041010 Sart1Q9Z315 806 aaKnown RBP29.42■■■□□ 2.3
Ccdc9-201ENSMUST00000041010 Gm13695A2AK44 830 aa29.4■■■□□ 2.3
Ccdc9-201ENSMUST00000041010 Abca9Q8K449 1623 aa29.39■■■□□ 2.3
Ccdc9-201ENSMUST00000041010 Supt6hQ62383 1726 aaKnown RBP29.39■■■□□ 2.3
Ccdc9-201ENSMUST00000041010 P3h3Q8CG70 732 aa29.39■■■□□ 2.29
Ccdc9-201ENSMUST00000041010 Hsp90aa1P07901 733 aaKnown RBP29.37■■■□□ 2.29
Ccdc9-201ENSMUST00000041010 Ak9G3UYQ4 1894 aa29.36■■■□□ 2.29
Ccdc9-201ENSMUST00000041010 Irx3P81067 507 aa29.35■■■□□ 2.29
Ccdc9-201ENSMUST00000041010 Ncoa1P70365 1447 aa29.35■■■□□ 2.29
Ccdc9-201ENSMUST00000041010 Prdm16A2A935 1275 aa29.35■■■□□ 2.29
Ccdc9-201ENSMUST00000041010 Gm156Q58A37 223 aa29.34■■■□□ 2.29
Ccdc9-201ENSMUST00000041010 Rprd2Q6NXI6 1469 aaKnown RBP29.34■■■□□ 2.29
Ccdc9-201ENSMUST00000041010 Nup155Q99P88 1391 aaKnown RBP29.34■■■□□ 2.29
Ccdc9-201ENSMUST00000041010 Ssh2Q5SW75 1423 aa29.34■■■□□ 2.29
Ccdc9-201ENSMUST00000041010 NrdcQ8BHG1 1161 aa29.33■■■□□ 2.29
Ccdc9-201ENSMUST00000041010 Adgrl3Q80TS3 1537 aa29.32■■■□□ 2.28
Ccdc9-201ENSMUST00000041010 Pik3c2gO70167 1506 aa29.31■■■□□ 2.28
Ccdc9-201ENSMUST00000041010 Pkd2O35245 966 aa29.31■■■□□ 2.28
Ccdc9-201ENSMUST00000041010 Abca17E9PX95 1733 aa29.3■■■□□ 2.28
Ccdc9-201ENSMUST00000041010 Tcerg1Q8CGF7 1100 aaKnown RBP29.3■■■□□ 2.28
Ccdc9-201ENSMUST00000041010 Fgd1P52734 960 aa29.29■■■□□ 2.28
Ccdc9-201ENSMUST00000041010 Rrp7aQ9D1C9 280 aaKnown RBP29.28■■■□□ 2.28
Ccdc9-201ENSMUST00000041010 Clstn2Q9ER65 966 aa29.28■■■□□ 2.28
Ccdc9-201ENSMUST00000041010 Ttll5Q8CHB8 1328 aa29.27■■■□□ 2.28
Ccdc9-201ENSMUST00000041010 DroshaQ5HZJ0 1373 aaKnown RBP29.27■■■□□ 2.28
Ccdc9-201ENSMUST00000041010 Slc4a3P16283 1227 aa29.26■■■□□ 2.27
Ccdc9-201ENSMUST00000041010 Exoc6Q8R313 802 aa29.25■■■□□ 2.27
Ccdc9-201ENSMUST00000041010 Arid3cA6PWV5 409 aa29.25■■■□□ 2.27
Ccdc9-201ENSMUST00000041010 Wwc2Q6NXJ0 1187 aa29.25■■■□□ 2.27
Ccdc9-201ENSMUST00000041010 PnisrA2AJT4 805 aaKnown RBP29.24■■■□□ 2.27
Ccdc9-201ENSMUST00000041010 PtprgQ05909 1442 aa29.22■■■□□ 2.27
Ccdc9-201ENSMUST00000041010 Usp47Q8BY87 1376 aa29.22■■■□□ 2.27
Ccdc9-201ENSMUST00000041010 Map4P27546 1125 aaKnown RBP29.21■■■□□ 2.27
Ccdc9-201ENSMUST00000041010 Xrn1P97789 1719 aaKnown RBP29.2■■■□□ 2.26
Ccdc9-201ENSMUST00000041010 Plcd4Q8K3R3 807 aa29.17■■■□□ 2.26
Ccdc9-201ENSMUST00000041010 Asxl1P59598 1514 aa29.16■■■□□ 2.26
Ccdc9-201ENSMUST00000041010 Clasp1Q80TV8 1535 aaKnown RBP29.15■■■□□ 2.26
Ccdc9-201ENSMUST00000041010 Spag9Q58A65 1321 aaKnown RBP29.15■■■□□ 2.26
Ccdc9-201ENSMUST00000041010 AglF8VPN4 1532 aa29.14■■■□□ 2.26
Ccdc9-201ENSMUST00000041010 Kif1bQ60575 1816 aaKnown RBP29.14■■■□□ 2.26
Ccdc9-201ENSMUST00000041010 Iqcf3Q9D498 203 aa29.13■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 Col17a1Q07563 1470 aa29.13■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 Trak1Q6PD31 939 aa29.13■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 Nos1Q9Z0J4 1429 aa29.13■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 Kdm5cP41230 1554 aa29.13■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 Lemd3Q9WU40 921 aa29.12■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 Robo2Q7TPD3 1470 aa29.12■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 Usp54Q8BL06 1588 aaKnown RBP29.12■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 ShprhQ7TPQ3 1674 aa29.11■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 Kif14L0N7N1 1674 aaKnown RBP29.1■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 Map3k5O35099 1380 aa29.1■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 Dhx9O70133 1380 aaKnown RBP29.1■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 Kiaa0556Q8C753 1610 aa29.09■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 OvosQ3UU35 1456 aa29.09■■■□□ 2.25
Ccdc9-201ENSMUST00000041010 Ofd1Q80Z25 1017 aa29.07■■■□□ 2.24
Ccdc9-201ENSMUST00000041010 Atp10aO54827 1508 aa29.05■■■□□ 2.24
Ccdc9-201ENSMUST00000041010 Myo5cE9Q1F5 1742 aa29.05■■■□□ 2.24
Ccdc9-201ENSMUST00000041010 L3mbtl2P59178 703 aa29.04■■■□□ 2.24
Ccdc9-201ENSMUST00000041010 Cd109Q8R422 1442 aa29.03■■■□□ 2.24
Ccdc9-201ENSMUST00000041010 Kcnh8P59111 1102 aa29.03■■■□□ 2.24
Ccdc9-201ENSMUST00000041010 Znf518aB2RRF6 1478 aaKnown RBP29.03■■■□□ 2.24
Ccdc9-201ENSMUST00000041010 Mink1Q9JM52 1308 aa29.02■■■□□ 2.24
Ccdc9-201ENSMUST00000041010 Dot1lQ6XZL8 1540 aa29.01■■■□□ 2.24
Ccdc9-201ENSMUST00000041010 Plch2A2AP18 1501 aa29■■■□□ 2.23
Ccdc9-201ENSMUST00000041010 Ttc37F8VPK0 1563 aa29■■■□□ 2.23
Ccdc9-201ENSMUST00000041010 Rock1P70335 1354 aa28.98■■■□□ 2.23
Ccdc9-201ENSMUST00000041010 Depdc5P61460 1591 aa28.96■■■□□ 2.23
Ccdc9-201ENSMUST00000041010 Pde4cQ3UEI1 686 aa28.96■■■□□ 2.23
Ccdc9-201ENSMUST00000041010 Ppip5k1A2ARP1 1436 aa28.95■■■□□ 2.23
Ccdc9-201ENSMUST00000041010 Mbd5B1AYB6 1498 aa28.95■■■□□ 2.23
Ccdc9-201ENSMUST00000041010 Nsd2Q8BVE8 1365 aa28.95■■■□□ 2.22
Ccdc9-201ENSMUST00000041010 Topbp1Q6ZQF0 1515 aa28.95■■■□□ 2.22
Ccdc9-201ENSMUST00000041010 Atp7aQ64430 1491 aa28.94■■■□□ 2.22
Ccdc9-201ENSMUST00000041010 Cdc42bpgQ80UW5 1551 aa28.93■■■□□ 2.22
Ccdc9-201ENSMUST00000041010 Ipo4Q8VI75 1082 aa28.93■■■□□ 2.22
Ccdc9-201ENSMUST00000041010 Myom3A2ABU4 1439 aa28.92■■■□□ 2.22
Ccdc9-201ENSMUST00000041010 Fndc1E9Q043 1732 aa28.91■■■□□ 2.22
Ccdc9-201ENSMUST00000041010 4933416C03RikQ3V063 378 aa28.89■■■□□ 2.21
Ccdc9-201ENSMUST00000041010 Plekhg5Q66T02 1073 aa28.88■■■□□ 2.21
Ccdc9-201ENSMUST00000041010 Cul9Q80TT8 1865 aa28.88■■■□□ 2.21
Ccdc9-201ENSMUST00000041010 RereQ80TZ9 1558 aa28.87■■■□□ 2.21
Ccdc9-201ENSMUST00000041010 Iqgap1Q9JKF1 1657 aaKnown RBP28.87■■■□□ 2.21
Ccdc9-201ENSMUST00000041010 Kank1E9Q238 1360 aa28.86■■■□□ 2.21
Ccdc9-201ENSMUST00000041010 Uggt2E9Q4X2 1504 aa28.86■■■□□ 2.21
Ccdc9-201ENSMUST00000041010 Ylpm1Q9R0I7 1386 aaKnown RBP28.86■■■□□ 2.21
Ccdc9-201ENSMUST00000041010 ChgaP26339 463 aaKnown RBP28.86■■■□□ 2.21
Ccdc9-201ENSMUST00000041010 Zbtb7cQ8VCZ7 619 aa28.86■■■□□ 2.21
Ccdc9-201ENSMUST00000041010 Dip2cE9PWR4 1557 aa28.84■■■□□ 2.21
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms