RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Gm14025A2AP89 1413 aa9.51□□□□□ -0.89
Usp40-201ENSMUST00000040783 Mak16Q8BGS0 296 aaKnown RBP9.5□□□□□ -0.89
Usp40-201ENSMUST00000040783 Grin2bQ01097 1482 aa9.5□□□□□ -0.89
Usp40-201ENSMUST00000040783 Tnnt1O88346 262 aa9.5□□□□□ -0.89
Usp40-201ENSMUST00000040783 CanxP35564 591 aaKnown RBP9.5□□□□□ -0.89
Usp40-201ENSMUST00000040783 Bcl11bQ99PV8 884 aa9.5□□□□□ -0.89
Usp40-201ENSMUST00000040783 Gm7298A0A0N4SVU1 1476 aa9.49□□□□□ -0.89
Usp40-201ENSMUST00000040783 Hsp90b1P08113 802 aaKnown RBP9.49□□□□□ -0.89
Usp40-201ENSMUST00000040783 Ecm2Q5FW85 670 aa9.49□□□□□ -0.89
Usp40-201ENSMUST00000040783 Pde4cQ3UEI1 686 aa9.49□□□□□ -0.89
Usp40-201ENSMUST00000040783 Tmco5bQ80X59 307 aa9.49□□□□□ -0.89
Usp40-201ENSMUST00000040783 Armcx1Q9CX83 456 aa9.48□□□□□ -0.89
Usp40-201ENSMUST00000040783 KnstrnQ9D9Z1 312 aaKnown RBP9.48□□□□□ -0.89
Usp40-201ENSMUST00000040783 Plb1Q3TTY0 1478 aa9.48□□□□□ -0.89
Usp40-201ENSMUST00000040783 Mink1Q9JM52 1308 aa9.48□□□□□ -0.89
Usp40-201ENSMUST00000040783 Clstn1Q9EPL2 979 aa9.48□□□□□ -0.89
Usp40-201ENSMUST00000040783 Arhgap5P97393 1501 aa9.48□□□□□ -0.89
Usp40-201ENSMUST00000040783 Pip4k2bQ80XI4 416 aa9.47□□□□□ -0.89
Usp40-201ENSMUST00000040783 Cc2d2aQ8CFW7 1633 aa9.47□□□□□ -0.89
Usp40-201ENSMUST00000040783 Pde3bQ61409 1100 aa9.47□□□□□ -0.89
Usp40-201ENSMUST00000040783 Ipo4Q8VI75 1082 aa9.47□□□□□ -0.89
Usp40-201ENSMUST00000040783 Stk31Q99MW1 1018 aa9.46□□□□□ -0.89
Usp40-201ENSMUST00000040783 Fyb1O35601 819 aa9.46□□□□□ -0.9
Usp40-201ENSMUST00000040783 Pank3Q8R2W9 370 aa9.46□□□□□ -0.9
Usp40-201ENSMUST00000040783 Vsig10D3YX43 558 aa9.46□□□□□ -0.9
Usp40-201ENSMUST00000040783 Rab11fip3Q8CHD8 1047 aa9.46□□□□□ -0.9
Usp40-201ENSMUST00000040783 Atf3Q60765 181 aa9.45□□□□□ -0.9
Usp40-201ENSMUST00000040783 Fam43aQ8BUP8 424 aa9.45□□□□□ -0.9
Usp40-201ENSMUST00000040783 Tsen2Q6P7W5 460 aa9.45□□□□□ -0.9
Usp40-201ENSMUST00000040783 Fam163aQ8CAA5 168 aa9.45□□□□□ -0.9
Usp40-201ENSMUST00000040783 Sh3bp5Q9Z131 463 aa9.45□□□□□ -0.9
Usp40-201ENSMUST00000040783 Pdcl3Q8BVF2 240 aa9.44□□□□□ -0.9
Usp40-201ENSMUST00000040783 Wdr62Q3U3T8 1523 aa9.44□□□□□ -0.9
Usp40-201ENSMUST00000040783 Map3k5O35099 1380 aa9.44□□□□□ -0.9
Usp40-201ENSMUST00000040783 Gm21190A0A0G2JGJ6 266 aa9.44□□□□□ -0.9
Usp40-201ENSMUST00000040783 MccE9PWI3 1003 aa9.44□□□□□ -0.9
Usp40-201ENSMUST00000040783 Dbr1Q923B1 550 aa9.44□□□□□ -0.9
Usp40-201ENSMUST00000040783 Fam184bQ0KK56 942 aa9.43□□□□□ -0.9
Usp40-201ENSMUST00000040783 Ccdc141E9Q8Q6 1531 aa9.43□□□□□ -0.9
Usp40-201ENSMUST00000040783 BicraF8VPZ9 1578 aa9.43□□□□□ -0.9
Usp40-201ENSMUST00000040783 Map3k1P53349 1493 aa9.43□□□□□ -0.9
Usp40-201ENSMUST00000040783 Ccar1Q8CH18 1146 aaKnown RBP9.43□□□□□ -0.9
Usp40-201ENSMUST00000040783 Igf1rQ60751 1373 aa9.43□□□□□ -0.9
Usp40-201ENSMUST00000040783 Gsto1O09131 240 aa9.42□□□□□ -0.9
Usp40-201ENSMUST00000040783 Ksr2Q3UVC0 959 aa9.42□□□□□ -0.9
Usp40-201ENSMUST00000040783 Ppm1gQ61074 542 aa9.42□□□□□ -0.9
Usp40-201ENSMUST00000040783 Mroh2bQ7M6Y6 1581 aa9.42□□□□□ -0.9
Usp40-201ENSMUST00000040783 EprsQ8CGC7 1512 aaKnown RBP9.42□□□□□ -0.9
Usp40-201ENSMUST00000040783 Pibf1E9Q6K3 756 aa9.42□□□□□ -0.9
Usp40-201ENSMUST00000040783 PnnO35691 725 aaKnown RBP9.42□□□□□ -0.9
Usp40-201ENSMUST00000040783 AcrbpQ3V140 540 aa9.42□□□□□ -0.9
Usp40-201ENSMUST00000040783 Q9D9H8 365 aa9.41□□□□□ -0.9
Usp40-201ENSMUST00000040783 Inpp5dQ9ES52 1191 aa9.41□□□□□ -0.9
Usp40-201ENSMUST00000040783 Ciz1Q8VEH2 845 aa9.41□□□□□ -0.9
Usp40-201ENSMUST00000040783 Puf60Q3UEB3 564 aaKnown RBP9.41□□□□□ -0.9
Usp40-201ENSMUST00000040783 Afap1Q80YS6 731 aa9.41□□□□□ -0.9
Usp40-201ENSMUST00000040783 Sirt1Q923E4 737 aa9.41□□□□□ -0.9
Usp40-201ENSMUST00000040783 Rrp12Q6P5B0 1295 aaKnown RBP9.4□□□□□ -0.9
Usp40-201ENSMUST00000040783 CrbnQ8C7D2 445 aa9.4□□□□□ -0.9
Usp40-201ENSMUST00000040783 Rassf8Q8CJ96 419 aa9.4□□□□□ -0.9
Usp40-201ENSMUST00000040783 Dapk1Q80YE7 1442 aa9.4□□□□□ -0.9
Usp40-201ENSMUST00000040783 Chmp3Q9CQ10 224 aa9.4□□□□□ -0.9
Usp40-201ENSMUST00000040783 Naip1Q9QWK5 1403 aa9.4□□□□□ -0.91
Usp40-201ENSMUST00000040783 Chmp7Q8R1T1 451 aa9.4□□□□□ -0.91
Usp40-201ENSMUST00000040783 Map7d2A2AG50 781 aa9.39□□□□□ -0.91
Usp40-201ENSMUST00000040783 B4galnt3Q6L8S8 986 aa9.39□□□□□ -0.91
Usp40-201ENSMUST00000040783 Ubap1lG3UW59 384 aa9.39□□□□□ -0.91
Usp40-201ENSMUST00000040783 Ppm1fQ8CGA0 452 aa9.39□□□□□ -0.91
Usp40-201ENSMUST00000040783 Znf330Q922H9 316 aa9.39□□□□□ -0.91
Usp40-201ENSMUST00000040783 GsdmaQ9EST1 446 aa9.39□□□□□ -0.91
Usp40-201ENSMUST00000040783 FanciQ8K368 1330 aa9.39□□□□□ -0.91
Usp40-201ENSMUST00000040783 Senp3Q9EP97 568 aaKnown RBP9.39□□□□□ -0.91
Usp40-201ENSMUST00000040783 Atp2b2Q9R0K7 1198 aa9.39□□□□□ -0.91
Usp40-201ENSMUST00000040783 Kif7B7ZNG0 1348 aa9.39□□□□□ -0.91
Usp40-201ENSMUST00000040783 Crocc2F6XLV1 1638 aa9.39□□□□□ -0.91
Usp40-201ENSMUST00000040783 IbspQ61711 324 aa9.39□□□□□ -0.91
Usp40-201ENSMUST00000040783 Htatsf1Q8BGC0 757 aa9.38□□□□□ -0.91
Usp40-201ENSMUST00000040783 Cd109Q8R422 1442 aa9.38□□□□□ -0.91
Usp40-201ENSMUST00000040783 PtmsQ9D0J8 101 aaKnown RBP9.38□□□□□ -0.91
Usp40-201ENSMUST00000040783 Dnai2A2AC93 623 aa9.37□□□□□ -0.91
Usp40-201ENSMUST00000040783 Ankrd36D3Z4K0 1415 aa9.37□□□□□ -0.91
Usp40-201ENSMUST00000040783 Cyb5rlB1AS42 316 aa9.37□□□□□ -0.91
Usp40-201ENSMUST00000040783 Fbxo2Q80UW2 297 aa9.37□□□□□ -0.91
Usp40-201ENSMUST00000040783 Chmp5Q9D7S9 219 aa9.37□□□□□ -0.91
Usp40-201ENSMUST00000040783 Plcb2A3KGF7 1181 aa9.37□□□□□ -0.91
Usp40-201ENSMUST00000040783 Vps8Q0P5W1 1427 aa9.37□□□□□ -0.91
Usp40-201ENSMUST00000040783 Gsdma3Q5Y4Y6 464 aa9.36□□□□□ -0.91
Usp40-201ENSMUST00000040783 Liat1Q810M6 228 aa9.36□□□□□ -0.91
Usp40-201ENSMUST00000040783 MecomP14404 1042 aa9.36□□□□□ -0.91
Usp40-201ENSMUST00000040783 Zscan10Q3URR7 782 aa9.36□□□□□ -0.91
Usp40-201ENSMUST00000040783 Dnajc5bQ9CQ94 199 aa9.36□□□□□ -0.91
Usp40-201ENSMUST00000040783 Vgll3P85442 326 aa9.36□□□□□ -0.91
Usp40-201ENSMUST00000040783 Egfem1Q8C088 590 aa9.36□□□□□ -0.91
Usp40-201ENSMUST00000040783 TatQ8QZR1 454 aa9.36□□□□□ -0.91
Usp40-201ENSMUST00000040783 Camsap1A2AHC3 1581 aa9.35□□□□□ -0.91
Usp40-201ENSMUST00000040783 PtmaP26350 111 aa9.35□□□□□ -0.91
Usp40-201ENSMUST00000040783 GphnQ8BUV3 769 aaKnown RBP9.35□□□□□ -0.91
Usp40-201ENSMUST00000040783 Arhgef5E9Q7D5 1581 aa9.35□□□□□ -0.91
Usp40-201ENSMUST00000040783 Zfp644E9QA22 1323 aa9.35□□□□□ -0.91
Usp40-201ENSMUST00000040783 Washc2Q6PGL7 1334 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 142.3 ms