RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Irx3P81067 507 aa25.64■■□□□ 1.7
Tram1-201ENSMUST00000027068 Arhgap31A6X8Z5 1425 aa25.64■■□□□ 1.7
Tram1-201ENSMUST00000027068 RalgapbQ8BQZ4 1484 aa25.64■■□□□ 1.7
Tram1-201ENSMUST00000027068 Anp32bQ9EST5 272 aaKnown RBP25.64■■□□□ 1.7
Tram1-201ENSMUST00000027068 Setd1bQ8CFT2 1985 aa25.61■■□□□ 1.69
Tram1-201ENSMUST00000027068 Hsp90aa1P07901 733 aaKnown RBP25.6■■□□□ 1.69
Tram1-201ENSMUST00000027068 Iqcf3Q9D498 203 aa25.6■■□□□ 1.69
Tram1-201ENSMUST00000027068 Kiaa1551Q5DTW7 1521 aa25.59■■□□□ 1.69
Tram1-201ENSMUST00000027068 Rock2P70336 1388 aa25.59■■□□□ 1.69
Tram1-201ENSMUST00000027068 B4galnt3Q6L8S8 986 aa25.58■■□□□ 1.69
Tram1-201ENSMUST00000027068 Prkrip1Q9CWV6 186 aaKnown RBP25.58■■□□□ 1.69
Tram1-201ENSMUST00000027068 Mrc2Q64449 1479 aa25.57■■□□□ 1.68
Tram1-201ENSMUST00000027068 Shroom2A2ALU4 1481 aa25.56■■□□□ 1.68
Tram1-201ENSMUST00000027068 Pank3Q8R2W9 370 aa25.54■■□□□ 1.68
Tram1-201ENSMUST00000027068 Ttll13A4Q9F6 804 aa25.54■■□□□ 1.68
Tram1-201ENSMUST00000027068 Inpp5dQ9ES52 1191 aa25.53■■□□□ 1.68
Tram1-201ENSMUST00000027068 Prex2Q3LAC4 1598 aa25.53■■□□□ 1.68
Tram1-201ENSMUST00000027068 Polr3aB2RXC6 1390 aa25.53■■□□□ 1.68
Tram1-201ENSMUST00000027068 Magi1Q6RHR9 1471 aa25.52■■□□□ 1.68
Tram1-201ENSMUST00000027068 Dbr1Q923B1 550 aa25.51■■□□□ 1.67
Tram1-201ENSMUST00000027068 Cpsf1Q9EPU4 1441 aaKnown RBP25.51■■□□□ 1.67
Tram1-201ENSMUST00000027068 Esx1O88933 382 aa25.51■■□□□ 1.67
Tram1-201ENSMUST00000027068 Trpm2Q91YD4 1506 aa25.5■■□□□ 1.67
Tram1-201ENSMUST00000027068 Rrp7aQ9D1C9 280 aaKnown RBP25.5■■□□□ 1.67
Tram1-201ENSMUST00000027068 DaxxO35613 739 aa25.49■■□□□ 1.67
Tram1-201ENSMUST00000027068 Asxl1P59598 1514 aa25.48■■□□□ 1.67
Tram1-201ENSMUST00000027068 Ccdc141E9Q8Q6 1531 aa25.47■■□□□ 1.67
Tram1-201ENSMUST00000027068 Mink1Q9JM52 1308 aa25.47■■□□□ 1.67
Tram1-201ENSMUST00000027068 CrbnQ8C7D2 445 aa25.47■■□□□ 1.67
Tram1-201ENSMUST00000027068 Fam163aQ8CAA5 168 aa25.47■■□□□ 1.67
Tram1-201ENSMUST00000027068 Ifit1bl1D3Z6F0 470 aa25.47■■□□□ 1.67
Tram1-201ENSMUST00000027068 Abcc2Q8VI47 1543 aa25.46■■□□□ 1.67
Tram1-201ENSMUST00000027068 Dot1lQ6XZL8 1540 aa25.45■■□□□ 1.66
Tram1-201ENSMUST00000027068 DroshaQ5HZJ0 1373 aaKnown RBP25.44■■□□□ 1.66
Tram1-201ENSMUST00000027068 4933416C03RikQ3V063 378 aa25.44■■□□□ 1.66
Tram1-201ENSMUST00000027068 Apbb1Q9QXJ1 710 aa25.44■■□□□ 1.66
Tram1-201ENSMUST00000027068 PrxO55103 1391 aa25.44■■□□□ 1.66
Tram1-201ENSMUST00000027068 Ak9G3UYQ4 1894 aa25.43■■□□□ 1.66
Tram1-201ENSMUST00000027068 Nup160Q9Z0W3 1402 aaKnown RBP25.43■■□□□ 1.66
Tram1-201ENSMUST00000027068 CanxP35564 591 aaKnown RBP25.42■■□□□ 1.66
Tram1-201ENSMUST00000027068 Mapkbp1Q6NS57 1503 aa25.42■■□□□ 1.66
Tram1-201ENSMUST00000027068 Mroh2aD3Z750 1679 aa25.42■■□□□ 1.66
Tram1-201ENSMUST00000027068 Zmym4A2A791 1549 aaKnown RBP25.39■■□□□ 1.66
Tram1-201ENSMUST00000027068 Mlh3A0A1Y7VMP7 1443 aa25.38■■□□□ 1.65
Tram1-201ENSMUST00000027068 Iqgap1Q9JKF1 1657 aaKnown RBP25.38■■□□□ 1.65
Tram1-201ENSMUST00000027068 Kdm5cP41230 1554 aa25.37■■□□□ 1.65
Tram1-201ENSMUST00000027068 Zscan10Q3URR7 782 aa25.37■■□□□ 1.65
Tram1-201ENSMUST00000027068 Rock1P70335 1354 aa25.36■■□□□ 1.65
Tram1-201ENSMUST00000027068 Kif16bB1AVY7 1312 aa25.35■■□□□ 1.65
Tram1-201ENSMUST00000027068 Ssh2Q5SW75 1423 aa25.34■■□□□ 1.65
Tram1-201ENSMUST00000027068 Ccdc9Q8VC31 543 aaKnown RBP25.34■■□□□ 1.65
Tram1-201ENSMUST00000027068 PtprgQ05909 1442 aa25.34■■□□□ 1.65
Tram1-201ENSMUST00000027068 TnikP83510 1323 aa25.33■■□□□ 1.65
Tram1-201ENSMUST00000027068 Nkx1-2P42580 305 aa25.33■■□□□ 1.65
Tram1-201ENSMUST00000027068 Ipo4Q8VI75 1082 aa25.33■■□□□ 1.65
Tram1-201ENSMUST00000027068 Sart3Q9JLI8 962 aaKnown RBP25.33■■□□□ 1.65
Tram1-201ENSMUST00000027068 Cd109Q8R422 1442 aa25.33■■□□□ 1.65
Tram1-201ENSMUST00000027068 Atp7aQ64430 1491 aa25.32■■□□□ 1.64
Tram1-201ENSMUST00000027068 Tarbp1E9Q368 1579 aa25.32■■□□□ 1.64
Tram1-201ENSMUST00000027068 Clstn2Q9ER65 966 aa25.31■■□□□ 1.64
Tram1-201ENSMUST00000027068 Slc4a1apE9PX68 744 aa25.3■■□□□ 1.64
Tram1-201ENSMUST00000027068 Caskin1Q6P9K8 1431 aa25.3■■□□□ 1.64
Tram1-201ENSMUST00000027068 Tubgcp6G5E8P0 1769 aa25.29■■□□□ 1.64
Tram1-201ENSMUST00000027068 Gapvd1Q6PAR5 1458 aa25.29■■□□□ 1.64
Tram1-201ENSMUST00000027068 Tmf1B9EKI3 1091 aa25.28■■□□□ 1.64
Tram1-201ENSMUST00000027068 Neurod2Q62414 383 aa25.27■■□□□ 1.64
Tram1-201ENSMUST00000027068 Ppp2r1aQ76MZ3 589 aa25.27■■□□□ 1.64
Tram1-201ENSMUST00000027068 Rwdd1Q9CQK7 243 aa25.27■■□□□ 1.64
Tram1-201ENSMUST00000027068 Mroh3A0A1D5RM54 893 aa25.26■■□□□ 1.63
Tram1-201ENSMUST00000027068 Chmp5Q9D7S9 219 aa25.26■■□□□ 1.63
Tram1-201ENSMUST00000027068 Kdm2aP59997 1161 aa25.26■■□□□ 1.63
Tram1-201ENSMUST00000027068 Sart1Q9Z315 806 aaKnown RBP25.26■■□□□ 1.63
Tram1-201ENSMUST00000027068 Fmn2Q9JL04 1578 aa25.25■■□□□ 1.63
Tram1-201ENSMUST00000027068 Lrrc9Q8CDN9 1456 aa25.25■■□□□ 1.63
Tram1-201ENSMUST00000027068 Erich6D3Z6S9 713 aa25.25■■□□□ 1.63
Tram1-201ENSMUST00000027068 EspnQ9ET47 871 aa25.25■■□□□ 1.63
Tram1-201ENSMUST00000027068 Kdm2bQ6P1G2 1309 aa25.25■■□□□ 1.63
Tram1-201ENSMUST00000027068 Dnajc5bQ9CQ94 199 aa25.23■■□□□ 1.63
Tram1-201ENSMUST00000027068 Jph4Q80WT0 628 aa25.22■■□□□ 1.63
Tram1-201ENSMUST00000027068 Mbd3Q9Z2D8 285 aaKnown RBP25.22■■□□□ 1.63
Tram1-201ENSMUST00000027068 Plch2A2AP18 1501 aa25.22■■□□□ 1.63
Tram1-201ENSMUST00000027068 Trappc8E9PWG2 1437 aa25.21■■□□□ 1.63
Tram1-201ENSMUST00000027068 Speer4f1Q9D5Q6 258 aa25.21■■□□□ 1.63
Tram1-201ENSMUST00000027068 Eif4g3Q80XI3 1579 aaKnown RBP25.21■■□□□ 1.63
Tram1-201ENSMUST00000027068 Prdm10Q3UTQ7 1184 aa25.2■■□□□ 1.63
Tram1-201ENSMUST00000027068 Tex14Q7M6U3 1450 aa25.2■■□□□ 1.62
Tram1-201ENSMUST00000027068 NudcO35685 332 aaKnown RBP25.2■■□□□ 1.62
Tram1-201ENSMUST00000027068 Setd1aE9PYH6 1716 aa25.19■■□□□ 1.62
Tram1-201ENSMUST00000027068 Dnai1Q8C0M8 701 aa25.19■■□□□ 1.62
Tram1-201ENSMUST00000027068 Zcchc11B2RX14 1644 aaKnown RBP25.18■■□□□ 1.62
Tram1-201ENSMUST00000027068 Pbrm1Q8BSQ9 1634 aaKnown RBP25.17■■□□□ 1.62
Tram1-201ENSMUST00000027068 Adgrl2Q8JZZ7 1487 aa25.16■■□□□ 1.62
Tram1-201ENSMUST00000027068 Srcin1Q9QWI6 1250 aa25.16■■□□□ 1.62
Tram1-201ENSMUST00000027068 Neo1P97798 1493 aa25.15■■□□□ 1.62
Tram1-201ENSMUST00000027068 Dcaf11Q91VU6 549 aa25.15■■□□□ 1.62
Tram1-201ENSMUST00000027068 AknaQ80VW7 1404 aa25.14■■□□□ 1.61
Tram1-201ENSMUST00000027068 Fam184bQ0KK56 942 aa25.13■■□□□ 1.61
Tram1-201ENSMUST00000027068 4930567H17RikQ3V0K5 233 aa25.13■■□□□ 1.61
Tram1-201ENSMUST00000027068 Os9Q8K2C7 672 aa25.13■■□□□ 1.61
Tram1-201ENSMUST00000027068 Arhgap5P97393 1501 aa25.13■■□□□ 1.61
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms