RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 WrnO09053 1401 aa20.86■□□□□ 0.93
Col17a1-201ENSMUST00000026045 Shroom4Q1W617 1475 aa20.86■□□□□ 0.93
Col17a1-201ENSMUST00000026045 Kif3bQ61771 747 aa20.86■□□□□ 0.93
Col17a1-201ENSMUST00000026045 Chmp4bQ9D8B3 224 aaKnown RBP20.86■□□□□ 0.93
Col17a1-201ENSMUST00000026045 Phf14Q9D4H9 881 aa20.85■□□□□ 0.93
Col17a1-201ENSMUST00000026045 Slc4a1apE9PX68 744 aa20.84■□□□□ 0.93
Col17a1-201ENSMUST00000026045 Znf771Q8BJ90 317 aa20.83■□□□□ 0.93
Col17a1-201ENSMUST00000026045 Golga2Q921M4 999 aa20.83■□□□□ 0.93
Col17a1-201ENSMUST00000026045 U2af1Q9D883 239 aaKnown RBP20.82■□□□□ 0.92
Col17a1-201ENSMUST00000026045 Cald1E9QA15 768 aaKnown RBP20.82■□□□□ 0.92
Col17a1-201ENSMUST00000026045 Iqcf3Q9D498 203 aa20.82■□□□□ 0.92
Col17a1-201ENSMUST00000026045 PnnO35691 725 aaKnown RBP20.82■□□□□ 0.92
Col17a1-201ENSMUST00000026045 Rsph3aQ3UFY4 516 aa20.82■□□□□ 0.92
Col17a1-201ENSMUST00000026045 Mrvi1Q9WUX5 899 aaKnown RBP20.82■□□□□ 0.92
Col17a1-201ENSMUST00000026045 Taf3Q5HZG4 932 aa20.81■□□□□ 0.92
Col17a1-201ENSMUST00000026045 Cspp1B2RX88 1205 aa20.81■□□□□ 0.92
Col17a1-201ENSMUST00000026045 MccE9PWI3 1003 aa20.8■□□□□ 0.92
Col17a1-201ENSMUST00000026045 Hsp90b1P08113 802 aaKnown RBP20.78■□□□□ 0.92
Col17a1-201ENSMUST00000026045 Znf710Q3U288 666 aa20.78■□□□□ 0.92
Col17a1-201ENSMUST00000026045 Plin1Q8CGN5 517 aa20.78■□□□□ 0.92
Col17a1-201ENSMUST00000026045 Ppp1r18Q8BQ30 594 aa20.77■□□□□ 0.92
Col17a1-201ENSMUST00000026045 Pank3Q8R2W9 370 aa20.77■□□□□ 0.92
Col17a1-201ENSMUST00000026045 Eif2s2Q99L45 331 aaKnown RBP20.77■□□□□ 0.92
Col17a1-201ENSMUST00000026045 Fan1Q69ZT1 1020 aa20.75■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Naip1Q9QWK5 1403 aa20.74■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Ankrd36D3Z4K0 1415 aa20.74■□□□□ 0.91
Col17a1-201ENSMUST00000026045 U2surpQ6NV83 1029 aaKnown RBP20.74■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Vgll3P85442 326 aa20.73■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Arap1Q4LDD4 1452 aa20.72■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Tomm22Q9CPQ3 142 aa20.72■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Efcab5A0JP43 1406 aa20.72■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Cc2d2bA0A286YDU8 1405 aa20.72■□□□□ 0.91
Col17a1-201ENSMUST00000026045 MyclP10166 368 aa20.72■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Cluap1Q8R3P7 413 aa20.71■□□□□ 0.91
Col17a1-201ENSMUST00000026045 CalrP14211 416 aaKnown RBP20.71■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Tmco5bQ80X59 307 aa20.71■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Inpp5dQ9ES52 1191 aa20.71■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Dapk1Q80YE7 1442 aa20.71■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Ncapd3Q6ZQK0 1506 aa20.71■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Kif3aP28741 701 aa20.71■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Tdrd9Q14BI7 1383 aa20.71■□□□□ 0.91
Col17a1-201ENSMUST00000026045 Cux1P53564 1515 aa20.7■□□□□ 0.9
Col17a1-201ENSMUST00000026045 Rad54l2Q99NG0 1466 aa20.7■□□□□ 0.9
Col17a1-201ENSMUST00000026045 Paxip1Q6NZQ4 1056 aa20.7■□□□□ 0.9
Col17a1-201ENSMUST00000026045 Birc3O08863 600 aa20.7■□□□□ 0.9
Col17a1-201ENSMUST00000026045 Znf330Q922H9 316 aa20.69■□□□□ 0.9
Col17a1-201ENSMUST00000026045 Pnmal2G3X9N3 661 aa20.69■□□□□ 0.9
Col17a1-201ENSMUST00000026045 GorabQ8BRM2 368 aa20.69■□□□□ 0.9
Col17a1-201ENSMUST00000026045 Zfp644E9QA22 1323 aa20.67■□□□□ 0.9
Col17a1-201ENSMUST00000026045 Vps8Q0P5W1 1427 aa20.67■□□□□ 0.9
Col17a1-201ENSMUST00000026045 Ak7Q9D2H2 614 aa20.67■□□□□ 0.9
Col17a1-201ENSMUST00000026045 Samd1D3YXK1 519 aa20.66■□□□□ 0.9
Col17a1-201ENSMUST00000026045 Ralbp1Q62172 648 aa20.66■□□□□ 0.9
Col17a1-201ENSMUST00000026045 Senp3Q9EP97 568 aaKnown RBP20.66■□□□□ 0.9
Col17a1-201ENSMUST00000026045 CgnP59242 1191 aa20.66■□□□□ 0.9
Col17a1-201ENSMUST00000026045 Ksr2Q3UVC0 959 aa20.65■□□□□ 0.9
Col17a1-201ENSMUST00000026045 Anp32eP97822 260 aaKnown RBP20.64■□□□□ 0.9
Col17a1-201ENSMUST00000026045 NrkQ9R0G8 1455 aa20.64■□□□□ 0.9
Col17a1-201ENSMUST00000026045 AampJ3QN89 436 aa20.64■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Spag9Q58A65 1321 aaKnown RBP20.63■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Kif20aP97329 887 aa20.63■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Dusp27Q148W8 1138 aa20.63■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Zfp777B9EKF4 885 aa20.63■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Glipr1l2Q9CQ35 332 aa20.62■□□□□ 0.89
Col17a1-201ENSMUST00000026045 AcrbpQ3V140 540 aa20.62■□□□□ 0.89
Col17a1-201ENSMUST00000026045 HnrnpuQ8VEK3 800 aaKnown RBP20.62■□□□□ 0.89
Col17a1-201ENSMUST00000026045 PtprkP35822 1457 aa20.61■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Pes1Q9EQ61 584 aaKnown RBP20.61■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Arhgef5E9Q7D5 1581 aa20.6■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Rtf1A2AQ19 715 aaKnown RBP20.6■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Pdia4P08003 638 aaKnown RBP20.59■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Duox2A2AQ99 1517 aa20.59■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Polr1aO35134 1717 aaKnown RBP20.59■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Ylpm1Q9R0I7 1386 aaKnown RBP20.59■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Jph4Q80WT0 628 aa20.59■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Tpd52l1O54818 204 aa20.58■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Cwc15Q9JHS9 229 aaKnown RBP20.58■□□□□ 0.89
Col17a1-201ENSMUST00000026045 Psme1P97371 249 aa20.58■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Rock1P70335 1354 aa20.58■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Dusp9Q7TNL7 452 aa20.57■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Rfx1P48377 963 aa20.57■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Sf3a1Q8K4Z5 791 aaKnown RBP20.57■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Esx1O88933 382 aa20.56■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Usp40Q8BWR4 1235 aa20.56■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Fam184bQ0KK56 942 aa20.56■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Grin2bQ01097 1482 aa20.56■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Ncoa2Q61026 1462 aa20.56■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Txndc2Q6P902 515 aa20.55■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Ccar1Q8CH18 1146 aaKnown RBP20.55■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Casq1O09165 405 aa20.54■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Map3k1P53349 1493 aa20.54■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Rabep1O35551 862 aa20.54■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Zscan10Q3URR7 782 aa20.54■□□□□ 0.88
Col17a1-201ENSMUST00000026045 CenpjQ569L8 1344 aa20.54■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Tsen2Q6P7W5 460 aa20.54■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Gripap1Q8VD04 806 aa20.54■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Kif7B7ZNG0 1348 aa20.54■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Ccdc34Q3UI66 367 aa20.53■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Washc2Q6PGL7 1334 aa20.53■□□□□ 0.88
Col17a1-201ENSMUST00000026045 Top2bQ64511 1612 aa20.53■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms