RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Shroom4Q1W617 1475 aa17.62■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Pcmtd1P59913 357 aa17.61■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Inpp5dQ9ES52 1191 aa17.61■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Gm973E9Q295 1059 aa17.61■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Tsen2Q6P7W5 460 aa17.61■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Soga1E1U8D0 1418 aa17.61■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Usp40Q8BWR4 1235 aa17.6■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Anapc15P60007 132 aa17.6■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Ipo9Q91YE6 1041 aa17.6■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Pde3bQ61409 1100 aa17.6■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Mfap1aC0HKD8 439 aaKnown RBP17.6■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Mfap1bC0HKD9 439 aaKnown RBP17.6■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Efcab5A0JP43 1406 aa17.58■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Ggt6Q6PDE7 497 aa17.58■□□□□ 0.4
Col1a1-201ENSMUST00000001547 Dapk1Q80YE7 1442 aa17.58■□□□□ 0.4
Col1a1-201ENSMUST00000001547 PtmsQ9D0J8 101 aaKnown RBP17.57■□□□□ 0.4
Col1a1-201ENSMUST00000001547 Pibf1E9Q6K3 756 aa17.57■□□□□ 0.4
Col1a1-201ENSMUST00000001547 Nol10Q5RJG1 687 aaKnown RBP17.56■□□□□ 0.4
Col1a1-201ENSMUST00000001547 HdgfP51859 237 aaKnown RBP17.56■□□□□ 0.4
Col1a1-201ENSMUST00000001547 Polr1aO35134 1717 aaKnown RBP17.56■□□□□ 0.4
Col1a1-201ENSMUST00000001547 Fam184bQ0KK56 942 aa17.56■□□□□ 0.4
Col1a1-201ENSMUST00000001547 Shq1Q7TMX5 569 aa17.56■□□□□ 0.4
Col1a1-201ENSMUST00000001547 Ap3b2Q9JME5 1082 aa17.55■□□□□ 0.4
Col1a1-201ENSMUST00000001547 Top2aQ01320 1528 aaKnown RBP17.55■□□□□ 0.4
Col1a1-201ENSMUST00000001547 Ankrd36D3Z4K0 1415 aa17.54■□□□□ 0.4
Col1a1-201ENSMUST00000001547 Pabpn1Q8CCS6 302 aaKnown RBP17.54■□□□□ 0.4
Col1a1-201ENSMUST00000001547 Rock1P70335 1354 aa17.54■□□□□ 0.4
Col1a1-201ENSMUST00000001547 Kif7B7ZNG0 1348 aa17.53■□□□□ 0.4
Col1a1-201ENSMUST00000001547 Rad54l2Q99NG0 1466 aa17.52■□□□□ 0.39
Col1a1-201ENSMUST00000001547 Stk31Q99MW1 1018 aa17.51■□□□□ 0.39
Col1a1-201ENSMUST00000001547 MecomP14404 1042 aa17.51■□□□□ 0.39
Col1a1-201ENSMUST00000001547 GsdmaQ9EST1 446 aa17.51■□□□□ 0.39
Col1a1-201ENSMUST00000001547 GorabQ8BRM2 368 aa17.5■□□□□ 0.39
Col1a1-201ENSMUST00000001547 ErbinQ80TH2 1402 aa17.5■□□□□ 0.39
Col1a1-201ENSMUST00000001547 Mink1Q9JM52 1308 aa17.49■□□□□ 0.39
Col1a1-201ENSMUST00000001547 Zscan10Q3URR7 782 aa17.49■□□□□ 0.39
Col1a1-201ENSMUST00000001547 Iffo2Q8R2V2 512 aa17.49■□□□□ 0.39
Col1a1-201ENSMUST00000001547 SetQ9EQU5 289 aaKnown RBP17.48■□□□□ 0.39
Col1a1-201ENSMUST00000001547 Vps8Q0P5W1 1427 aa17.47■□□□□ 0.39
Col1a1-201ENSMUST00000001547 Q8BT18 775 aa17.47■□□□□ 0.39
Col1a1-201ENSMUST00000001547 Cabp4Q8VHC5 271 aa17.47■□□□□ 0.39
Col1a1-201ENSMUST00000001547 Ccdc60Q8C4J0 545 aa17.47■□□□□ 0.39
Col1a1-201ENSMUST00000001547 Nsd2Q8BVE8 1365 aa17.46■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Nolc1E9Q5C9 702 aaKnown RBP17.45■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Brpf1B2RRD7 1212 aa17.45■□□□□ 0.38
Col1a1-201ENSMUST00000001547 CgnP59242 1191 aa17.45■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Kiaa0754Q69ZZ9 979 aa17.45■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Taok2Q6ZQ29 1240 aa17.45■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Urb2E9Q7L1 1524 aaKnown RBP17.44■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Duox2A2AQ99 1517 aa17.44■□□□□ 0.38
Col1a1-201ENSMUST00000001547 NrkQ9R0G8 1455 aa17.44■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Chmp3Q9CQ10 224 aa17.43■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Naip1Q9QWK5 1403 aa17.43■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Esx1O88933 382 aa17.43■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Ccdc146E9Q9F7 977 aa17.43■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Smarce1O54941 411 aaKnown RBP17.42■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Cgnl1Q6AW69 1298 aa17.42■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Ralbp1Q62172 648 aa17.42■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Zfp644E9QA22 1323 aa17.41■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Rrp12Q6P5B0 1295 aaKnown RBP17.41■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Ift140E9PY46 1464 aa17.41■□□□□ 0.38
Col1a1-201ENSMUST00000001547 G3bp1P97855 465 aaKnown RBP17.41■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Ylpm1Q9R0I7 1386 aaKnown RBP17.41■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Pde4cQ3UEI1 686 aa17.4■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Pak3Q61036 559 aa17.4■□□□□ 0.38
Col1a1-201ENSMUST00000001547 RdxP26043 583 aaKnown RBP17.4■□□□□ 0.38
Col1a1-201ENSMUST00000001547 Prdm16A2A935 1275 aa17.39■□□□□ 0.38
Col1a1-201ENSMUST00000001547 ChgaP26339 463 aaKnown RBP17.39■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Slc4a10Q5DTL9 1118 aa17.39■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Tpm3-rs7D3Z2H9 248 aa17.37■□□□□ 0.37
Col1a1-201ENSMUST00000001547 R3hcc1Q8BSI6 488 aa17.37■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Cald1E9QA15 768 aaKnown RBP17.37■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Gpatch11Q3UFS4 262 aa17.37■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Rab11fip3Q8CHD8 1047 aa17.36■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Rpgrip1lQ8CG73 1264 aa17.36■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Arhgef5E9Q7D5 1581 aa17.35■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Gm7298A0A0N4SVU1 1476 aa17.35■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Grin2bQ01097 1482 aa17.35■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Arhgap31A6X8Z5 1425 aa17.35■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Arhgap5P97393 1501 aa17.35■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Atp6v1dP57746 247 aa17.35■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Arap1Q4LDD4 1452 aa17.34■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Gsto1O09131 240 aa17.34■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Map3k1P53349 1493 aa17.33■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Puf60Q3UEB3 564 aaKnown RBP17.33■□□□□ 0.37
Col1a1-201ENSMUST00000001547 CrebrfQ8CDG5 640 aaKnown RBP17.33■□□□□ 0.37
Col1a1-201ENSMUST00000001547 Gm21190A0A0G2JGJ6 266 aa17.33■□□□□ 0.36
Col1a1-201ENSMUST00000001547 PogzQ8BZH4 1409 aaKnown RBP17.32■□□□□ 0.36
Col1a1-201ENSMUST00000001547 Trim30aP15533 496 aa17.31■□□□□ 0.36
Col1a1-201ENSMUST00000001547 Trim58Q5NCC9 485 aa17.31■□□□□ 0.36
Col1a1-201ENSMUST00000001547 Cd109Q8R422 1442 aa17.31■□□□□ 0.36
Col1a1-201ENSMUST00000001547 Dnai2A2AC93 623 aa17.3■□□□□ 0.36
Col1a1-201ENSMUST00000001547 Ncapd3Q6ZQK0 1506 aa17.3■□□□□ 0.36
Col1a1-201ENSMUST00000001547 Map3k5O35099 1380 aa17.3■□□□□ 0.36
Col1a1-201ENSMUST00000001547 SlkO54988 1233 aa17.29■□□□□ 0.36
Col1a1-201ENSMUST00000001547 Ccdc30Q8BVF4 654 aa17.29■□□□□ 0.36
Col1a1-201ENSMUST00000001547 Cc2d1aQ8K1A6 943 aa17.29■□□□□ 0.36
Col1a1-201ENSMUST00000001547 Mroh2bQ7M6Y6 1581 aa17.28■□□□□ 0.36
Col1a1-201ENSMUST00000001547 Mical1Q8VDP3 1048 aa17.28■□□□□ 0.36
Col1a1-201ENSMUST00000001547 Ciz1Q8VEH2 845 aa17.28■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms