RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 TRX2P22803 104 aaKnown RBP-0.13□□□□□ -2.43
snR48snR48 URA10P30402 227 aa-0.13□□□□□ -2.43
snR48snR48 IST2P38250 946 aa-0.13□□□□□ -2.43
snR48snR48 CTM1P38818 585 aa-0.13□□□□□ -2.43
snR48snR48 MOB2P43563 287 aa-0.13□□□□□ -2.43
snR48snR48 YFR018CP43599 363 aa-0.13□□□□□ -2.43
snR48snR48 DON1Q05610 365 aa-0.13□□□□□ -2.43
snR48snR48 GAT3Q07928 141 aa-0.13□□□□□ -2.43
snR48snR48 VPS68Q12016 184 aa-0.13□□□□□ -2.43
snR48snR48 RUP1Q12242 671 aa-0.13□□□□□ -2.43
snR48snR48 MTR10Q99189 972 aa-0.13□□□□□ -2.43
snR48snR48 VPS63O13549 108 aa-0.14□□□□□ -2.43
snR48snR48 ARO3P14843 370 aaKnown RBP-0.14□□□□□ -2.43
snR48snR48 SCO1P23833 295 aa-0.14□□□□□ -2.43
snR48snR48 CLB3P24870 427 aa-0.14□□□□□ -2.43
snR48snR48 YKL071WP36086 256 aa-0.14□□□□□ -2.43
snR48snR48 ASC1P38011 319 aaKnown RBP-0.14□□□□□ -2.43
snR48snR48 OLA1P38219 394 aaKnown RBP-0.14□□□□□ -2.43
snR48snR48 FCY21P40039 528 aa-0.14□□□□□ -2.43
snR48snR48 RRG9P40156 214 aa-0.14□□□□□ -2.43
snR48snR48 MIC19P43594 170 aa-0.14□□□□□ -2.43
snR48snR48 YJL027CP47063 138 aaPredicted RBP-0.14□□□□□ -2.43
snR48snR48 FMP48P53233 369 aa-0.14□□□□□ -2.43
snR48snR48 YNL040WP53960 456 aaPredicted RBP-0.14□□□□□ -2.43
snR48snR48 ACL4Q03771 387 aa-0.14□□□□□ -2.43
snR48snR48 ARX1Q03862 593 aaKnown RBP-0.14□□□□□ -2.43
snR48snR48 DCR2Q05924 578 aa-0.14□□□□□ -2.43
snR48snR48 AEP3Q12089 606 aa-0.14□□□□□ -2.43
snR48snR48 RNH203Q12338 110 aa-0.14□□□□□ -2.43
snR48snR48 RPL12AP0CX53 165 aaKnown RBP-0.15□□□□□ -2.43
snR48snR48 RPL12BP0CX54 165 aa-0.15□□□□□ -2.43
snR48snR48 HSP104P31539 908 aaKnown RBP-0.15□□□□□ -2.43
snR48snR48 CAB3P36076 571 aa-0.15□□□□□ -2.43
snR48snR48 BYE1P36106 594 aa-0.15□□□□□ -2.43
snR48snR48 STN1P38960 494 aa-0.15□□□□□ -2.43
snR48snR48 EFM3P47163 339 aa-0.15□□□□□ -2.43
snR48snR48 SCS7Q03529 384 aa-0.15□□□□□ -2.43
snR48snR48 YLH47Q06493 454 aa-0.15□□□□□ -2.43
snR48snR48 YOL159C-AQ3E769 90 aa-0.15□□□□□ -2.43
snR48snR48 RIM1P32445 135 aaKnown RBP-0.16□□□□□ -2.44
snR48snR48 TOA2P32774 122 aa-0.16□□□□□ -2.44
snR48snR48 RFT1P38206 574 aaPredicted RBP-0.16□□□□□ -2.44
snR48snR48 LCB2P40970 561 aa-0.16□□□□□ -2.44
snR48snR48 LSG1P53145 640 aaKnown RBP-0.16□□□□□ -2.44
snR48snR48 MED2Q12124 431 aa-0.16□□□□□ -2.44
snR48snR48 TIM22Q12328 207 aa-0.16□□□□□ -2.44
snR48snR48 SMF2P38778 549 aa-0.17□□□□□ -2.44
snR48snR48 UTP9P38882 575 aaKnown RBP-0.17□□□□□ -2.44
snR48snR48 PIR5P46999 287 aa-0.17□□□□□ -2.44
snR48snR48 SUR7P54003 302 aa-0.17□□□□□ -2.44
snR48snR48 IMH1Q06704 911 aaKnown RBP-0.17□□□□□ -2.44
snR48snR48 YOR012WQ12351 137 aa-0.17□□□□□ -2.44
snR48snR48 REC107P21651 314 aa-0.18□□□□□ -2.44
snR48snR48 GFD2P25370 566 aaKnown RBP-0.18□□□□□ -2.44
snR48snR48 RRT12P25381 491 aa-0.18□□□□□ -2.44
snR48snR48 QDR3P38227 689 aa-0.18□□□□□ -2.44
snR48snR48 DSE2P38844 325 aa-0.18□□□□□ -2.44
snR48snR48 YJR146WP47174 117 aa-0.18□□□□□ -2.44
snR48snR48 RPT4P53549 437 aaKnown RBP-0.18□□□□□ -2.44
snR48snR48 PRP3Q03338 469 aaPredicted RBP-0.18□□□□□ -2.44
snR48snR48 TRM82Q03774 444 aa-0.18□□□□□ -2.44
snR48snR48 CKA1P15790 372 aa-0.19□□□□□ -2.44
snR48snR48 NRP1P32770 719 aaKnown RBP RIP-Chip data-0.19□□□□□ -2.44not detected
snR48snR48 CSE1P33307 960 aa-0.19□□□□□ -2.44
snR48snR48 ZTA1P38230 334 aaKnown RBP-0.19□□□□□ -2.44
snR48snR48 MMS21P38632 267 aa-0.19□□□□□ -2.44
snR48snR48 SLM1P40485 686 aa-0.19□□□□□ -2.44
snR48snR48 SDS23P53172 527 aa-0.19□□□□□ -2.44
snR48snR48 RRB1Q04225 511 aaKnown RBP-0.19□□□□□ -2.44
snR48snR48 URC2Q04411 772 aa-0.19□□□□□ -2.44
snR48snR48 ROY1Q04847 553 aa-0.19□□□□□ -2.44
snR48snR48 NSE1Q07913 336 aa-0.19□□□□□ -2.44
snR48snR48 SLM3Q12093 417 aa-0.19□□□□□ -2.44
snR48snR48 YRF1-4O13559 1382 aa-0.19□□□□□ -2.44
snR48snR48 YOL163WP0CF20 169 aa-0.2□□□□□ -2.44
snR48snR48 CDC42P19073 191 aa-0.2□□□□□ -2.44
snR48snR48 PRE7P23724 241 aaKnown RBP-0.2□□□□□ -2.44
snR48snR48 PHO91P27514 894 aa-0.2□□□□□ -2.44
snR48snR48 YSC83P32792 385 aa-0.2□□□□□ -2.44
snR48snR48 PEX5P35056 612 aa-0.2□□□□□ -2.44
snR48snR48 PCH2P38126 564 aa-0.2□□□□□ -2.44
snR48snR48 SHS1Q07657 551 aa-0.2□□□□□ -2.44
snR48snR48 ALE1Q08548 619 aa-0.2□□□□□ -2.44
snR48snR48 YPL150WQ12152 901 aa-0.2□□□□□ -2.44
snR48snR48 AFI1Q99222 893 aa-0.2□□□□□ -2.44
snR48snR48 RPL26AP05743 127 aaKnown RBP-0.21□□□□□ -2.44
snR48snR48 YOL162WP0CF19 215 aa-0.21□□□□□ -2.44
snR48snR48 RNA1P11745 407 aaKnown RBP-0.21□□□□□ -2.44
snR48snR48 MRPL8P22353 238 aa-0.21□□□□□ -2.44
snR48snR48 YCR051WP25631 222 aa-0.21□□□□□ -2.44
snR48snR48 DPB3P27344 201 aa-0.21□□□□□ -2.44
snR48snR48 GRE3P38715 327 aaKnown RBP RIP-Chip data-0.21□□□□□ -2.44not detected
snR48snR48 YHR182WP38870 785 aa-0.21□□□□□ -2.44
snR48snR48 PAC11P40960 533 aa-0.21□□□□□ -2.44
snR48snR48 RPL26BP53221 127 aaKnown RBP-0.21□□□□□ -2.44
snR48snR48 SLM2P53955 656 aa-0.21□□□□□ -2.44
snR48snR48 MDM1Q01846 1127 aa-0.21□□□□□ -2.44
snR48snR48 RTC5Q12108 567 aaKnown RBP-0.21□□□□□ -2.44
snR48snR48 PRR2Q12310 699 aa-0.21□□□□□ -2.44
snR48snR48 DET1Q99288 334 aaKnown RBP-0.21□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 217.5 ms