RNA–Protein interactions for RNA: snR46

snR46, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR46, Length 197 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR46	snR46	DNA2	P38859	1522 aa		0.05	□□□□□ -2.4
snR46	snR46	ARF1	P11076	181 aa	Known RBP	0.05	□□□□□ -2.4
snR46	snR46	YAK1	P14680	807 aa		0.05	□□□□□ -2.4
snR46	snR46	FAR1	P21268	830 aa		0.05	□□□□□ -2.4
snR46	snR46	SAS3	P34218	831 aa		0.05	□□□□□ -2.4
snR46	snR46	INM1	P38710	295 aa		0.05	□□□□□ -2.4
snR46	snR46	LSM4	P40070	187 aa	Known RBP	0.05	□□□□□ -2.4
snR46	snR46	ABM1	P47146	123 aa		0.05	□□□□□ -2.4
snR46	snR46	NUP57	P48837	541 aa		0.05	□□□□□ -2.4
snR46	snR46	TOS2	P50078	622 aa		0.05	□□□□□ -2.4
snR46	snR46	MIG2	P53035	382 aa		0.05	□□□□□ -2.4
snR46	snR46	RTS3	P53289	263 aa		0.05	□□□□□ -2.4
snR46	snR46	PRP42	Q03776	544 aa	Known RBP	0.05	□□□□□ -2.4
snR46	snR46	RUP1	Q12242	671 aa		0.05	□□□□□ -2.4
snR46	snR46	DFM1	Q12743	341 aa	Known RBP	0.05	□□□□□ -2.4
snR46	snR46	OPI3	P05375	206 aa		0.04	□□□□□ -2.4
snR46	snR46	MET17	P06106	444 aa		0.04	□□□□□ -2.4
snR46	snR46	CLB3	P24870	427 aa		0.04	□□□□□ -2.4
snR46	snR46	URA10	P30402	227 aa		0.04	□□□□□ -2.4
snR46	snR46	MIC19	P43594	170 aa		0.04	□□□□□ -2.4
snR46	snR46	MED2	Q12124	431 aa		0.04	□□□□□ -2.4
snR46	snR46	YDR018C	Q12185	396 aa		0.04	□□□□□ -2.4
snR46	snR46	SNF2	P22082	1703 aa		0.04	□□□□□ -2.4
snR46	snR46	HSP104	P31539	908 aa	Known RBP	0.03	□□□□□ -2.4
snR46	snR46	OLA1	P38219	394 aa	Known RBP	0.03	□□□□□ -2.4
snR46	snR46	UTP9	P38882	575 aa	Known RBP	0.03	□□□□□ -2.4
snR46	snR46	YGL118C	P53132	145 aa		0.03	□□□□□ -2.4
snR46	snR46	DON1	Q05610	365 aa		0.03	□□□□□ -2.4
snR46	snR46	DIB1	Q06819	143 aa	Predicted RBP	0.03	□□□□□ -2.4
snR46	snR46	DCP1	Q12517	231 aa	Predicted RBP	0.03	□□□□□ -2.4
snR46	snR46	MTR10	Q99189	972 aa		0.03	□□□□□ -2.4
snR46	snR46	MEC1	P38111	2368 aa		0.03	□□□□□ -2.41
snR46	snR46	SPA2	P23201	1466 aa	Known RBP	0.03	□□□□□ -2.41
snR46	snR46	DYN1	P36022	4092 aa		0.02	□□□□□ -2.41
snR46	snR46	VPS63	O13549	108 aa		0.02	□□□□□ -2.41
snR46	snR46	MRPL20	P22354	195 aa	Predicted RBP	0.02	□□□□□ -2.41
snR46	snR46	YKL071W	P36086	256 aa		0.02	□□□□□ -2.41
snR46	snR46	ASC1	P38011	319 aa	Known RBP	0.02	□□□□□ -2.41
snR46	snR46	CTM1	P38818	585 aa		0.02	□□□□□ -2.41
snR46	snR46	MOB2	P43563	287 aa		0.02	□□□□□ -2.41
snR46	snR46	AQR1	P53943	586 aa		0.02	□□□□□ -2.41
snR46	snR46	TIM10	P87108	93 aa		0.02	□□□□□ -2.41
snR46	snR46	ACL4	Q03771	387 aa		0.02	□□□□□ -2.41
snR46	snR46	DPB3	P27344	201 aa		0.01	□□□□□ -2.41
snR46	snR46	RIM1	P32445	135 aa	Known RBP	0.01	□□□□□ -2.41
snR46	snR46	IST2	P38250	946 aa		0.01	□□□□□ -2.41
snR46	snR46	STN1	P38960	494 aa		0.01	□□□□□ -2.41
snR46	snR46	YFR018C	P43599	363 aa		0.01	□□□□□ -2.41
snR46	snR46	YMR166C	Q03829	368 aa		0.01	□□□□□ -2.41
snR46	snR46	SUE1	Q06524	206 aa		0.01	□□□□□ -2.41
snR46	snR46	GAT3	Q07928	141 aa		0.01	□□□□□ -2.41
snR46	snR46	URA2	P07259	2214 aa	Known RBP	0	□□□□□ -2.41
snR46	snR46	RPL40A	P0CH08	128 aa	Known RBP	0	□□□□□ -2.41
snR46	snR46	RPL40B	P0CH09	128 aa	Known RBP	0	□□□□□ -2.41
snR46	snR46	RPL12A	P0CX53	165 aa	Known RBP	0	□□□□□ -2.41
snR46	snR46	RPL12B	P0CX54	165 aa		0	□□□□□ -2.41
snR46	snR46	ARO3	P14843	370 aa	Known RBP	0	□□□□□ -2.41
snR46	snR46	REC107	P21651	314 aa		0	□□□□□ -2.41
snR46	snR46	GFD2	P25370	566 aa	Known RBP	0	□□□□□ -2.41
snR46	snR46	MPE1	P35728	441 aa	Known RBP	0	□□□□□ -2.41
snR46	snR46	RRG9	P40156	214 aa		0	□□□□□ -2.41
snR46	snR46	RPS29A	P41057	56 aa	Known RBP	0	□□□□□ -2.41
snR46	snR46	EFM3	P47163	339 aa		0	□□□□□ -2.41
snR46	snR46	FMP48	P53233	369 aa		0	□□□□□ -2.41
snR46	snR46	RPT4	P53549	437 aa	Known RBP	0	□□□□□ -2.41
snR46	snR46	PRP3	Q03338	469 aa	Predicted RBP	0	□□□□□ -2.41
snR46	snR46	ARX1	Q03862	593 aa	Known RBP	0	□□□□□ -2.41
snR46	snR46	INM2	Q05533	292 aa		0	□□□□□ -2.41
snR46	snR46	YLH47	Q06493	454 aa		0	□□□□□ -2.41
snR46	snR46	IMH1	Q06704	911 aa	Known RBP	0	□□□□□ -2.41
snR46	snR46	AEP3	Q12089	606 aa		0	□□□□□ -2.41
snR46	snR46	RNH203	Q12338	110 aa		0	□□□□□ -2.41
snR46	snR46	YOL159C-A	Q3E769	90 aa		0	□□□□□ -2.41
snR46	snR46	SNT2	P53127	1403 aa		-0.01	□□□□□ -2.41
snR46	snR46	CKA1	P15790	372 aa		-0.01	□□□□□ -2.41
snR46	snR46	CAB3	P36076	571 aa		-0.01	□□□□□ -2.41
snR46	snR46	BYE1	P36106	594 aa		-0.01	□□□□□ -2.41
snR46	snR46	SSU72	P53538	206 aa	Predicted RBP	-0.01	□□□□□ -2.41
snR46	snR46	VPS68	Q12016	184 aa		-0.01	□□□□□ -2.41
snR46	snR46	TRA1	P38811	3744 aa		-0.01	□□□□□ -2.41
snR46	snR46	MYO2	P19524	1574 aa	Known RBP	-0.02	□□□□□ -2.41
snR46	snR46	INO80	P53115	1489 aa		-0.02	□□□□□ -2.41
snR46	snR46	CAT8	P39113	1433 aa		-0.02	□□□□□ -2.41
snR46	snR46	TOA2	P32774	122 aa		-0.02	□□□□□ -2.41
snR46	snR46	RFT1	P38206	574 aa	Predicted RBP	-0.02	□□□□□ -2.41
snR46	snR46	SMF2	P38778	549 aa		-0.02	□□□□□ -2.41
snR46	snR46	SCS7	Q03529	384 aa		-0.02	□□□□□ -2.41
snR46	snR46	DCR2	Q05924	578 aa		-0.02	□□□□□ -2.41
snR46	snR46	NSE1	Q07913	336 aa		-0.02	□□□□□ -2.41
snR46	snR46	GSC2	P40989	1895 aa		-0.03	□□□□□ -2.41
snR46	snR46	YJL197C-A	P0C5P0	93 aa		-0.03	□□□□□ -2.41
snR46	snR46	SCO1	P23833	295 aa		-0.03	□□□□□ -2.41
snR46	snR46	RRT12	P25381	491 aa		-0.03	□□□□□ -2.41
snR46	snR46	PEX5	P35056	612 aa		-0.03	□□□□□ -2.41
snR46	snR46	LSG1	P53145	640 aa	Known RBP	-0.03	□□□□□ -2.41
snR46	snR46	YGR266W	P53326	701 aa		-0.03	□□□□□ -2.41
snR46	snR46	YOR097C	Q12274	175 aa	Predicted RBP	-0.03	□□□□□ -2.41
snR46	snR46	TIM22	Q12328	207 aa		-0.03	□□□□□ -2.41
snR46	snR46	PDR10	P51533	1564 aa		-0.03	□□□□□ -2.41
snR46	snR46	THO2	P53552	1597 aa	Known RBP	-0.03	□□□□□ -2.41

Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms