RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C UTP11P34247 250 aaPredicted RBP7.62□□□□□ -1.19
SRP54YPR088C RRP4P38792 359 aaKnown RBP7.62□□□□□ -1.19
SRP54YPR088C NSG1P38837 291 aa7.62□□□□□ -1.19
SRP54YPR088C GDI1P39958 451 aaKnown RBP7.62□□□□□ -1.19
SRP54YPR088C DDI1P40087 428 aa7.62□□□□□ -1.19
SRP54YPR088C BUR6P40096 142 aa7.62□□□□□ -1.19
SRP54YPR088C BAP3P41815 604 aa7.62□□□□□ -1.19
SRP54YPR088C SNO3P43544 222 aa7.62□□□□□ -1.19
SRP54YPR088C MDE1P47095 244 aa7.62□□□□□ -1.19
SRP54YPR088C BUD17P53727 317 aa7.62□□□□□ -1.19
SRP54YPR088C OST6Q03723 332 aa7.62□□□□□ -1.19
SRP54YPR088C FIN1Q03898 291 aa7.62□□□□□ -1.19
SRP54YPR088C YMR087WQ04299 284 aa7.62□□□□□ -1.19
SRP54YPR088C ERB1Q04660 807 aaKnown RBP7.62□□□□□ -1.19
SRP54YPR088C SNT309Q06091 175 aaPredicted RBP7.62□□□□□ -1.19
SRP54YPR088C CDA2Q06703 312 aa7.62□□□□□ -1.19
SRP54YPR088C YLR040CQ07988 224 aa7.62□□□□□ -1.19
SRP54YPR088C RBD2Q12270 262 aa7.62□□□□□ -1.19
SRP54YPR088C YOS9Q99220 542 aa7.62□□□□□ -1.19
SRP54YPR088C DFG16Q99234 619 aa7.62□□□□□ -1.19
SRP54YPR088C IRA2P19158 3079 aa7.62□□□□□ -1.19
SRP54YPR088C TIM12P32830 109 aa7.61□□□□□ -1.19
SRP54YPR088C RTC2P38279 296 aa7.61□□□□□ -1.19
SRP54YPR088C CHL4P38907 458 aa7.61□□□□□ -1.19
SRP54YPR088C SSY5P47002 699 aa7.61□□□□□ -1.19
SRP54YPR088C SHE4P51534 789 aa7.61□□□□□ -1.19
SRP54YPR088C TFB3Q03290 321 aa7.61□□□□□ -1.19
SRP54YPR088C RRP17Q04031 235 aaPredicted RBP7.61□□□□□ -1.19
SRP54YPR088C GAL83Q04739 417 aa7.61□□□□□ -1.19
SRP54YPR088C PAL1Q05518 499 aaKnown RBP7.61□□□□□ -1.19
SRP54YPR088C YPR127WQ06494 345 aa7.61□□□□□ -1.19
SRP54YPR088C MCM21Q06675 368 aa7.61□□□□□ -1.19
SRP54YPR088C PRP46Q12417 451 aaPredicted RBP7.61□□□□□ -1.19
SRP54YPR088C ERD1P16151 362 aa7.6□□□□□ -1.19
SRP54YPR088C PRP28P23394 588 aa7.6□□□□□ -1.19
SRP54YPR088C NDC1P32500 655 aa7.6□□□□□ -1.19
SRP54YPR088C EMP70P32802 667 aa7.6□□□□□ -1.19
SRP54YPR088C MDL1P33310 695 aa7.6□□□□□ -1.19
SRP54YPR088C YPK3P38070 525 aa7.6□□□□□ -1.19
SRP54YPR088C LEU5P38702 357 aa7.6□□□□□ -1.19
SRP54YPR088C YHR035WP38769 630 aa7.6□□□□□ -1.19
SRP54YPR088C CUP9P41817 306 aa7.6□□□□□ -1.19
SRP54YPR088C STB1P42845 420 aa7.6□□□□□ -1.19
SRP54YPR088C IRC7P43623 340 aa7.6□□□□□ -1.19
SRP54YPR088C YJR098CP47139 656 aa7.6□□□□□ -1.19
SRP54YPR088C PMT3P47190 753 aa7.6□□□□□ -1.19
SRP54YPR088C COS10P52924 374 aa7.6□□□□□ -1.19
SRP54YPR088C MNT4P53745 580 aa7.6□□□□□ -1.19
SRP54YPR088C MRX10Q05648 414 aa7.6□□□□□ -1.19
SRP54YPR088C MLC2Q06580 163 aa7.6□□□□□ -1.19
SRP54YPR088C YOR389WQ08912 624 aa7.6□□□□□ -1.19
SRP54YPR088C LSO1Q3E827 93 aa7.6□□□□□ -1.19
SRP54YPR088C TAD3Q9URQ3 322 aa7.6□□□□□ -1.19
SRP54YPR088C MET2P08465 486 aa7.6□□□□□ -1.19
SRP54YPR088C RPL40AP0CH08 128 aaKnown RBP7.6□□□□□ -1.19
SRP54YPR088C RPL40BP0CH09 128 aaKnown RBP7.6□□□□□ -1.19
SRP54YPR088C ARF1P11076 181 aaKnown RBP7.6□□□□□ -1.19
SRP54YPR088C CLB2P24869 491 aa7.6□□□□□ -1.19
SRP54YPR088C CWH43P25618 953 aa7.6□□□□□ -1.19
SRP54YPR088C SUR1P33300 382 aa7.6□□□□□ -1.19
SRP54YPR088C JEN1P36035 616 aa7.6□□□□□ -1.19
SRP54YPR088C YBR139WP38109 508 aa7.6□□□□□ -1.19
SRP54YPR088C SKN7P38889 622 aa7.6□□□□□ -1.19
SRP54YPR088C AIM10P39965 576 aaKnown RBP7.6□□□□□ -1.19
SRP54YPR088C CIN1P40987 1014 aa7.6□□□□□ -1.19
SRP54YPR088C YGR054WP53235 642 aaKnown RBP7.6□□□□□ -1.19
SRP54YPR088C RHO5P53879 331 aaKnown RBP7.6□□□□□ -1.19
SRP54YPR088C PEX25Q02969 394 aa7.6□□□□□ -1.19
SRP54YPR088C DML1Q03652 475 aa7.6□□□□□ -1.19
SRP54YPR088C AVO1Q08236 1176 aa7.6□□□□□ -1.19
SRP54YPR088C YOR289WQ12012 251 aaPredicted RBP7.6□□□□□ -1.19
SRP54YPR088C MCP1Q12106 302 aa7.6□□□□□ -1.19
SRP54YPR088C PCL9Q12477 304 aa7.6□□□□□ -1.19
SRP54YPR088C YPT1P01123 206 aaKnown RBP7.59□□□□□ -1.19
SRP54YPR088C REP1P03871 373 aa7.59□□□□□ -1.19
SRP54YPR088C HAP4P14064 554 aa7.59□□□□□ -1.19
SRP54YPR088C NCP1P16603 691 aaKnown RBP7.59□□□□□ -1.19
SRP54YPR088C YPK2P18961 677 aa7.59□□□□□ -1.19
SRP54YPR088C PHO80P20052 293 aa7.59□□□□□ -1.19
SRP54YPR088C FMP23P38231 175 aa7.59□□□□□ -1.19
SRP54YPR088C HRB1P38922 454 aaKnown RBP RIP-Chip data7.59□□□□□ -1.19not detected
SRP54YPR088C HXT9P40885 567 aa7.59□□□□□ -1.19
SRP54YPR088C YNR062CP53748 327 aa7.59□□□□□ -1.19
SRP54YPR088C HXT11P54862 567 aa7.59□□□□□ -1.19
SRP54YPR088C MAK3Q03503 176 aa7.59□□□□□ -1.19
SRP54YPR088C EKI1Q03764 534 aa7.59□□□□□ -1.19
SRP54YPR088C SPC19Q03954 165 aa7.59□□□□□ -1.19
SRP54YPR088C SNO4Q04902 237 aa7.59□□□□□ -1.19
SRP54YPR088C YLR346CQ06139 101 aa7.59□□□□□ -1.19
SRP54YPR088C HSP33Q08914 237 aaKnown RBP7.59□□□□□ -1.19
SRP54YPR088C YPL191CQ08930 360 aa7.59□□□□□ -1.19
SRP54YPR088C HSP32Q08992 237 aa7.59□□□□□ -1.19
SRP54YPR088C YDL177CQ12257 170 aa7.59□□□□□ -1.19
SRP54YPR088C HAA1Q12753 694 aaKnown RBP7.59□□□□□ -1.19
SRP54YPR088C RPP2BP02400 110 aaKnown RBP7.58□□□□□ -1.2
SRP54YPR088C ADE5,7P07244 802 aaKnown RBP7.58□□□□□ -1.2
SRP54YPR088C HSP30P25619 332 aa7.58□□□□□ -1.2
SRP54YPR088C GPX1P36014 167 aa7.58□□□□□ -1.2
SRP54YPR088C YJL193WP39542 402 aa7.58□□□□□ -1.2
SRP54YPR088C PGA1P53896 198 aa7.58□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms