RNA–Protein interactions for RNA: YPL260W

YPL260W, Transcript of Putative substrate of cAMP-dependent protein kinase (PKA), yeast

Gene YPL260W, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL260W	YPL260W	DDI3	P0CH64	225 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	PDX1	P16451	410 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
YPL260W	YPL260W	MAG1	P22134	296 aa	Known RBP	4.18	□□□□□ -1.74
YPL260W	YPL260W	YCR102C	P25608	368 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	TRK2	P28584	889 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	SUA7	P29055	345 aa	Predicted RBP	4.18	□□□□□ -1.74
YPL260W	YPL260W	CYS3	P31373	394 aa	Known RBP	4.18	□□□□□ -1.74
YPL260W	YPL260W	MSN4	P33749	630 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	CSG2	P35206	410 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	COS9	P36034	407 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	MRPL36	P36531	177 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	DTR1	P38125	572 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	ICS2	P38284	255 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	SPL2	P38839	148 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	CHS7	P38843	316 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	PFS1	P38872	237 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	SHU2	P38957	223 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	ISC1	P40015	477 aa	Known RBP	4.18	□□□□□ -1.74
YPL260W	YPL260W	PAN6	P40459	309 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	GAB1	P41733	394 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	BAP3	P41815	604 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	GDS1	P41913	522 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	LSB3	P43603	459 aa	Known RBP	4.18	□□□□□ -1.74
YPL260W	YPL260W	NIT2	P47016	307 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	YJR011C	P47086	261 aa	Predicted RBP	4.18	□□□□□ -1.74
YPL260W	YPL260W	MCM22	P47167	239 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	DAN1	P47178	298 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	YGL185C	P53100	379 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	ROG1	P53118	685 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	YML096W	Q04489	525 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	YDR124W	Q04608	324 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	SPR28	Q04921	423 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	YDR222W	Q04925	415 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	RIF2	Q06208	395 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	GPI11	Q06636	219 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	RRG7	Q08774	242 aa	Predicted RBP	4.18	□□□□□ -1.74
YPL260W	YPL260W	YOR365C	Q08844	703 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	RKM5	Q12367	367 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	SFG1	Q12507	346 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	MHT1	Q12525	324 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	TMA7	Q3E764	64 aa	Known RBP	4.18	□□□□□ -1.74
YPL260W	YPL260W	FRT1	Q99332	602 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	PET20	Q99373	253 aa		4.18	□□□□□ -1.74
YPL260W	YPL260W	ADE4	P04046	510 aa	Known RBP	4.17	□□□□□ -1.74
YPL260W	YPL260W	CBP1	P07252	654 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	HTS1	P07263	546 aa	Known RBP	4.17	□□□□□ -1.74
YPL260W	YPL260W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
YPL260W	YPL260W	HAP3	P13434	144 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
YPL260W	YPL260W	PET18	P25362	215 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	VAC17	P25591	423 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	EHD3	P28817	500 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	YEF1	P32622	495 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	SKG6	P32900	734 aa	Predicted RBP	4.17	□□□□□ -1.74
YPL260W	YPL260W	CLB6	P32943	380 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	FLO10	P36170	1169 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	SDH4	P37298	181 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	RIB5	P38145	238 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	SHE3	P38272	425 aa	Known RBP	4.17	□□□□□ -1.74
YPL260W	YPL260W	AME1	P38313	324 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	PEX28	P38848	579 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	FAD1	P38913	306 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	YAR028W	P39548	234 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	VPS52	P39904	641 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	GAT2	P40209	560 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	OPT1	P40897	799 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	PHO23	P50947	330 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	RPA49	Q01080	415 aa	Predicted RBP	4.17	□□□□□ -1.74
YPL260W	YPL260W	UBP16	Q02863	499 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	YMR209C	Q03648	457 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	SHH3	Q04487	196 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	GSF2	Q04697	403 aa	Known RBP	4.17	□□□□□ -1.74
YPL260W	YPL260W	TPO3	Q06451	622 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	RRT8	Q08219	342 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	YOL159C	Q08300	171 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	POM33	Q12164	279 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	LEU9	Q12166	604 aa	Known RBP	4.17	□□□□□ -1.74
YPL260W	YPL260W	RGT2	Q12300	763 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	MRX4	Q12467	430 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	YPR145C-A	Q2V2P0	78 aa		4.17	□□□□□ -1.74
YPL260W	YPL260W	SGA1	P08019	549 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	PRB1	P09232	635 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	UNG1	P12887	359 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	DAL82	P21705	255 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	PUP3	P25451	205 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	RIM1	P32445	135 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	CAT2	P32796	670 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	LIP5	P32875	414 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	SKT5	P34226	696 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	FRE2	P36033	711 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	YCR087C-A	P37263	153 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	YBR284W	P38150	797 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	HSL7	P38274	827 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	TOS1	P38288	455 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	ATG12	P38316	186 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	DBP8	P38719	431 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	YHR035W	P38769	630 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	FMO1	P38866	432 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	GCV3	P39726	170 aa	Predicted RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 57.9 ms