RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W COS9P36034 407 aa4.49□□□□□ -1.69
SSO1YPL232W PFK26P40433 827 aaKnown RBP4.49□□□□□ -1.69
SSO1YPL232W HXT9P40885 567 aa4.49□□□□□ -1.69
SSO1YPL232W POP1P41812 875 aa4.49□□□□□ -1.69
SSO1YPL232W MTR3P48240 250 aaPredicted RBP4.49□□□□□ -1.69
SSO1YPL232W MTM1P53320 366 aa4.49□□□□□ -1.69
SSO1YPL232W MTQ1P53944 314 aa4.49□□□□□ -1.69
SSO1YPL232W HXT11P54862 567 aa4.49□□□□□ -1.69
SSO1YPL232W MRP51Q02950 344 aa4.49□□□□□ -1.69
SSO1YPL232W CTL1Q03220 320 aaKnown RBP4.49□□□□□ -1.69
SSO1YPL232W TVP15Q03860 143 aa4.49□□□□□ -1.69
SSO1YPL232W YAP6Q03935 383 aa4.49□□□□□ -1.69
SSO1YPL232W YKU80Q04437 629 aa4.49□□□□□ -1.69
SSO1YPL232W YLR413WQ06689 675 aa4.49□□□□□ -1.69
SSO1YPL232W SNA4Q07549 140 aa4.49□□□□□ -1.69
SSO1YPL232W IRC19Q07843 230 aa4.49□□□□□ -1.69
SSO1YPL232W NIP7Q08962 181 aaKnown RBP4.49□□□□□ -1.69
SSO1YPL232W YPR071WQ12346 211 aa4.49□□□□□ -1.69
SSO1YPL232W SNF8Q12483 233 aa4.49□□□□□ -1.69
SSO1YPL232W PUT2P07275 575 aa4.48□□□□□ -1.69
SSO1YPL232W MSI1P13712 422 aa4.48□□□□□ -1.69
SSO1YPL232W UGA1P17649 471 aa4.48□□□□□ -1.69
SSO1YPL232W TEF4P36008 412 aaKnown RBP4.48□□□□□ -1.69
SSO1YPL232W ECM34P38728 170 aa4.48□□□□□ -1.69
SSO1YPL232W RRP4P38792 359 aaKnown RBP4.48□□□□□ -1.69
SSO1YPL232W VPS41P38959 992 aa4.48□□□□□ -1.69
SSO1YPL232W GAB1P41733 394 aa4.48□□□□□ -1.69
SSO1YPL232W YNL010WP53981 241 aaKnown RBP4.48□□□□□ -1.69
SSO1YPL232W SSY1Q03770 852 aa4.48□□□□□ -1.69
SSO1YPL232W YHC1Q05900 231 aaKnown RBP4.48□□□□□ -1.69
SSO1YPL232W YOL131WQ08270 108 aa4.48□□□□□ -1.69
SSO1YPL232W YDL109CQ12103 647 aa4.48□□□□□ -1.69
SSO1YPL232W SAS5Q99314 248 aa4.48□□□□□ -1.69
SSO1YPL232W RPO26P20435 155 aa4.47□□□□□ -1.69
SSO1YPL232W EXG1P23776 448 aaKnown RBP4.47□□□□□ -1.69
SSO1YPL232W ILV6P25605 309 aaKnown RBP4.47□□□□□ -1.69
SSO1YPL232W VMA11P32842 164 aa4.47□□□□□ -1.69
SSO1YPL232W HIS7P33734 552 aaKnown RBP4.47□□□□□ -1.69
SSO1YPL232W HCS1P34243 683 aa4.47□□□□□ -1.69
SSO1YPL232W MAE1P36013 669 aaKnown RBP4.47□□□□□ -1.69
SSO1YPL232W YBL029WP38201 376 aa4.47□□□□□ -1.69
SSO1YPL232W ICS2P38284 255 aa4.47□□□□□ -1.69
SSO1YPL232W LIN1P38852 340 aaPredicted RBP4.47□□□□□ -1.69
SSO1YPL232W SHU2P38957 223 aa4.47□□□□□ -1.69
SSO1YPL232W YER121WP40076 114 aa4.47□□□□□ -1.69
SSO1YPL232W PIG2P40187 538 aa4.47□□□□□ -1.69
SSO1YPL232W TOS2P50078 622 aa4.47□□□□□ -1.69
SSO1YPL232W YIP4P53093 235 aa4.47□□□□□ -1.69
SSO1YPL232W COS6P53344 381 aa4.47□□□□□ -1.69
SSO1YPL232W SNF12P53628 566 aa4.47□□□□□ -1.69
SSO1YPL232W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
SSO1YPL232W ISU1Q03020 165 aa4.47□□□□□ -1.69
SSO1YPL232W FMN1Q03778 218 aa4.47□□□□□ -1.69
SSO1YPL232W RIM9Q04734 239 aa4.47□□□□□ -1.69
SSO1YPL232W UTP21Q06078 939 aaPredicted RBP4.47□□□□□ -1.69
SSO1YPL232W ARV1Q06541 321 aa4.47□□□□□ -1.69
SSO1YPL232W GAT3Q07928 141 aa4.47□□□□□ -1.69
SSO1YPL232W YEH2Q07950 538 aa4.47□□□□□ -1.69
SSO1YPL232W MED2Q12124 431 aa4.47□□□□□ -1.69
SSO1YPL232W RNH203Q12338 110 aa4.47□□□□□ -1.69
SSO1YPL232W RPS23AP0CX29 145 aaKnown RBP4.46□□□□□ -1.7
SSO1YPL232W RPS23BP0CX30 145 aa4.46□□□□□ -1.7
SSO1YPL232W CLB3P24870 427 aa4.46□□□□□ -1.7
SSO1YPL232W GFD2P25370 566 aaKnown RBP4.46□□□□□ -1.7
SSO1YPL232W PTC1P35182 281 aa4.46□□□□□ -1.7
SSO1YPL232W GLR1P41921 483 aaKnown RBP4.46□□□□□ -1.7
SSO1YPL232W IMA1P53051 589 aa4.46□□□□□ -1.7
SSO1YPL232W SCS7Q03529 384 aa4.46□□□□□ -1.7
SSO1YPL232W YMR010WQ03687 405 aa4.46□□□□□ -1.7
SSO1YPL232W CSI2Q08054 341 aa4.46□□□□□ -1.7
SSO1YPL232W NOP12Q08208 459 aaKnown RBP4.46□□□□□ -1.7
SSO1YPL232W BRX1Q08235 291 aaKnown RBP4.46□□□□□ -1.7
SSO1YPL232W SGT1Q08446 395 aa4.46□□□□□ -1.7
SSO1YPL232W MUM3Q08750 479 aa4.46□□□□□ -1.7
SSO1YPL232W RTC5Q12108 567 aaKnown RBP4.46□□□□□ -1.7
SSO1YPL232W RLM1Q12224 676 aa4.46□□□□□ -1.7
SSO1YPL232W FSH3Q99369 266 aa4.46□□□□□ -1.7
SSO1YPL232W ARG81P05085 880 aa4.45□□□□□ -1.7
SSO1YPL232W PEP4P07267 405 aaKnown RBP4.45□□□□□ -1.7
SSO1YPL232W TOP3P13099 656 aa4.45□□□□□ -1.7
SSO1YPL232W ERD2P18414 219 aa4.45□□□□□ -1.7
SSO1YPL232W SHM2P37291 469 aaKnown RBP4.45□□□□□ -1.7
SSO1YPL232W MRPL16P38064 232 aa4.45□□□□□ -1.7
SSO1YPL232W YNL195CP40168 261 aa4.45□□□□□ -1.7
SSO1YPL232W RLP7P40693 322 aaKnown RBP4.45□□□□□ -1.7
SSO1YPL232W NIT3P49954 291 aa4.45□□□□□ -1.7
SSO1YPL232W BUD9P53226 547 aa4.45□□□□□ -1.7
SSO1YPL232W YNL046WP53956 172 aa4.45□□□□□ -1.7
SSO1YPL232W YMR279CQ03263 540 aa4.45□□□□□ -1.7
SSO1YPL232W DCI1Q08558 271 aa4.45□□□□□ -1.7
SSO1YPL232W BTS1Q12051 335 aa4.45□□□□□ -1.7
SSO1YPL232W FRE8Q12209 686 aa4.45□□□□□ -1.7
SSO1YPL232W YOR343CQ12484 108 aa4.45□□□□□ -1.7
SSO1YPL232W SEC12P11655 471 aa4.44□□□□□ -1.7
SSO1YPL232W MER1P16523 270 aa4.44□□□□□ -1.7
SSO1YPL232W THI4P32318 326 aa4.44□□□□□ -1.7
SSO1YPL232W MCM10P32354 571 aa4.44□□□□□ -1.7
SSO1YPL232W MDH3P32419 343 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
SSO1YPL232W CLB6P32943 380 aa4.44□□□□□ -1.7
SSO1YPL232W SPT10P35208 640 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms