RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	MAP2	P38174	421 aa	Known RBP	4.61	□□□□□ -1.67
PXA1	YPL147W	PCF11	P39081	626 aa	Predicted RBP	4.61	□□□□□ -1.67
PXA1	YPL147W	RFC2	P40348	353 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	SLS1	P42900	643 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	RGD2	P43556	714 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	BST1	P43571	1029 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	ADO1	P47143	340 aa	Known RBP	4.61	□□□□□ -1.67
PXA1	YPL147W	UBC9	P50623	157 aa	Predicted RBP	4.61	□□□□□ -1.67
PXA1	YPL147W	MTD1	Q02046	320 aa	Known RBP	4.61	□□□□□ -1.67
PXA1	YPL147W	SIZ1	Q04195	904 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	IMA2	Q08295	589 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	NUS1	Q12063	375 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	PYC1	P11154	1178 aa	Known RBP	4.61	□□□□□ -1.67
PXA1	YPL147W	PPH22	P23595	377 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	FSH1	P38777	243 aa	Known RBP	4.61	□□□□□ -1.67
PXA1	YPL147W	BIG1	P38813	335 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	FAR7	P43592	221 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	SPT20	P50875	604 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	YIP5	P53108	310 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	CAF40	P53829	373 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	SPP2	Q02521	185 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	RIM13	Q03792	727 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	YML096W	Q04489	525 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	OPT2	Q06593	877 aa		4.61	□□□□□ -1.67
PXA1	YPL147W	CUP2	P15315	225 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
PXA1	YPL147W	PRE1	P22141	198 aa	Known RBP	4.6	□□□□□ -1.67
PXA1	YPL147W	CLB2	P24869	491 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	CDC50	P25656	391 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	RGT1	P32862	1170 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	MRPL24	P36525	258 aa	Predicted RBP	4.6	□□□□□ -1.67
PXA1	YPL147W	YBR139W	P38109	508 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	IML3	P38265	245 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	AIM3	P38266	947 aa	Known RBP	4.6	□□□□□ -1.67
PXA1	YPL147W	TDA11	P38854	504 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	YNR062C	P53748	327 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	ADH6	Q04894	360 aa	Known RBP	4.6	□□□□□ -1.67
PXA1	YPL147W	NDJ1	Q12366	352 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	YKL183C-A	Q3E765	70 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	FSH3	Q99369	266 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	GSC2	P40989	1895 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	SAG1	P20840	650 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	SCL1	P21243	252 aa	Known RBP	4.6	□□□□□ -1.67
PXA1	YPL147W	CCA1	P21269	546 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	SEC22	P22214	214 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	MGR1	P25573	417 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	ECM25	P32525	599 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	REC114	P32841	428 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	BCK2	P33306	851 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	MRPL3	P36516	390 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	PRS3	P38689	320 aa	Known RBP	4.6	□□□□□ -1.67
PXA1	YPL147W	MLH1	P38920	769 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	RIP-Chip
PXA1	YPL147W	YGR149W	P48236	432 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	RSM27	P53305	110 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	TPS1	Q00764	495 aa	Known RBP	4.6	□□□□□ -1.67
PXA1	YPL147W	YML037C	Q03703	340 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	THI72	Q08579	599 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	DGK1	Q12382	290 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	OCA6	Q12454	224 aa		4.6	□□□□□ -1.67
PXA1	YPL147W	ERG11	P10614	530 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	YMR31	P19955	123 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	RPO26	P20435	155 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	IME1	P21190	360 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	DAL82	P21705	255 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	MIR1	P23641	311 aa	Known RBP	4.59	□□□□□ -1.67
PXA1	YPL147W	INO2	P26798	304 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	UGP1	P32861	499 aa	Known RBP	4.59	□□□□□ -1.67
PXA1	YPL147W	REC104	P33323	182 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	CHL4	P38907	458 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	AST2	P39945	430 aa	Known RBP	4.59	□□□□□ -1.67
PXA1	YPL147W	MAM33	P40513	266 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	PMT6	P42934	759 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	CIN2	P46670	268 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	AIM22	P47051	409 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	DOC1	P53068	250 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	UBC7	Q02159	165 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	ABF2	Q02486	183 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	YDR109C	Q04585	715 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	ATG39	Q06159	398 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	TPO3	Q06451	622 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	IRC10	Q08118	586 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	AAD15	Q08361	143 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	YHR213W-A	Q8TGT4	77 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	UBA3	Q99344	299 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	ARG82	P07250	355 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	TUB3	P09734	445 aa	Known RBP	4.59	□□□□□ -1.67
PXA1	YPL147W	MTF1	P14908	341 aa	Known RBP	4.59	□□□□□ -1.67
PXA1	YPL147W	AMD1	P15274	810 aa	Known RBP	4.59	□□□□□ -1.67
PXA1	YPL147W	NAR1	P23503	491 aa	Known RBP	4.59	□□□□□ -1.67
PXA1	YPL147W	PPZ1	P26570	692 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	CYS3	P31373	394 aa	Known RBP	4.59	□□□□□ -1.67
PXA1	YPL147W	NDC1	P32500	655 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	CMC1	P36064	111 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	IRS4	P36115	615 aa	Known RBP	4.59	□□□□□ -1.67
PXA1	YPL147W	SKG1	P36169	355 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	SKN7	P38889	622 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	PAC2	P39937	518 aa		4.59	□□□□□ -1.67
PXA1	YPL147W	UTP7	P40055	554 aa	Known RBP	4.59	□□□□□ -1.67
PXA1	YPL147W	BTT1	P40314	149 aa	Predicted RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms