RNA–Protein interactions for RNA: YOR361C

PRT1, Transcript of eIF3b subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene PRT1, Length 2,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRT1YOR361C SLI1P53304 468 aa4.7□□□□□ -1.66
PRT1YOR361C NOP19P53317 196 aaPredicted RBP4.7□□□□□ -1.66
PRT1YOR361C SAM50P53969 484 aa4.7□□□□□ -1.66
PRT1YOR361C CDD1Q06549 142 aa4.7□□□□□ -1.66
PRT1YOR361C SGT1Q08446 395 aa4.7□□□□□ -1.66
PRT1YOR361C ABP140Q08641 628 aaKnown RBP4.7□□□□□ -1.66
PRT1YOR361C YLR111WQ12528 110 aa4.7□□□□□ -1.66
PRT1YOR361C SAL1D6W196 494 aa4.69□□□□□ -1.66
PRT1YOR361C AMD1P15274 810 aaKnown RBP4.69□□□□□ -1.66
PRT1YOR361C SPS19P32573 292 aaKnown RBP4.69□□□□□ -1.66
PRT1YOR361C MRPL6P32904 214 aa4.69□□□□□ -1.66
PRT1YOR361C ECM15P35195 104 aa4.69□□□□□ -1.66
PRT1YOR361C GPX2P38143 162 aa4.69□□□□□ -1.66
PRT1YOR361C OSH3P38713 996 aaKnown RBP4.69□□□□□ -1.66
PRT1YOR361C SDS3P40505 327 aa4.69□□□□□ -1.66
PRT1YOR361C NRD1P53617 575 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
PRT1YOR361C YNR048WP53740 393 aa4.69□□□□□ -1.66
PRT1YOR361C PFA4Q12006 378 aa4.69□□□□□ -1.66
PRT1YOR361C SSC1P0CS90 654 aaKnown RBP4.69□□□□□ -1.66
PRT1YOR361C SWD2P36104 329 aaPredicted RBP4.69□□□□□ -1.66
PRT1YOR361C MAK5P38112 773 aaPredicted RBP4.69□□□□□ -1.66
PRT1YOR361C DHH1P39517 506 aaKnown RBP4.69□□□□□ -1.66
PRT1YOR361C NCA2Q12374 616 aa4.69□□□□□ -1.66
PRT1YOR361C GAL4P04386 881 aa4.68□□□□□ -1.66
PRT1YOR361C RPL27AP0C2H6 136 aaKnown RBP4.68□□□□□ -1.66
PRT1YOR361C RPL27BP0C2H7 136 aaKnown RBP4.68□□□□□ -1.66
PRT1YOR361C YMR31P19955 123 aa4.68□□□□□ -1.66
PRT1YOR361C MBR1P23493 339 aa4.68□□□□□ -1.66
PRT1YOR361C NUP2P32499 720 aa4.68□□□□□ -1.66
PRT1YOR361C PDR3P33200 976 aa4.68□□□□□ -1.66
PRT1YOR361C THI80P35202 319 aa4.68□□□□□ -1.66
PRT1YOR361C VPS21P36017 210 aaKnown RBP4.68□□□□□ -1.66
PRT1YOR361C MCR1P36060 302 aaKnown RBP4.68□□□□□ -1.66
PRT1YOR361C YER184CP39961 794 aa4.68□□□□□ -1.66
PRT1YOR361C PCL6P40038 420 aa4.68□□□□□ -1.66
PRT1YOR361C YNL194CP40169 301 aa4.68□□□□□ -1.66
PRT1YOR361C KEG1P43614 200 aa4.68□□□□□ -1.66
PRT1YOR361C YPT11P48559 417 aa4.68□□□□□ -1.66
PRT1YOR361C ARK1P53974 638 aa4.68□□□□□ -1.66
PRT1YOR361C THI20Q08224 551 aa4.68□□□□□ -1.66
PRT1YOR361C ERP3Q12403 225 aa4.68□□□□□ -1.66
PRT1YOR361C LIP5P32875 414 aa4.67□□□□□ -1.66
PRT1YOR361C UBC6P33296 250 aaPredicted RBP4.67□□□□□ -1.66
PRT1YOR361C YKL187CP34231 750 aa4.67□□□□□ -1.66
PRT1YOR361C NBP1P52919 319 aaPredicted RBP4.67□□□□□ -1.66
PRT1YOR361C YGR067CP53243 804 aa4.67□□□□□ -1.66
PRT1YOR361C YMR206WQ03695 313 aa4.67□□□□□ -1.66
PRT1YOR361C DSE3Q08729 430 aa4.67□□□□□ -1.66
PRT1YOR361C GLT1Q12680 2145 aaKnown RBP4.67□□□□□ -1.66
PRT1YOR361C YDR157WA0A023PZE8 133 aa4.67□□□□□ -1.66
PRT1YOR361C PAB1P04147 577 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
PRT1YOR361C SPC34P36131 295 aa4.67□□□□□ -1.66
PRT1YOR361C PRS2P38620 318 aaKnown RBP4.67□□□□□ -1.66
PRT1YOR361C RBG1P39729 369 aa4.67□□□□□ -1.66
PRT1YOR361C DDI1P40087 428 aa4.67□□□□□ -1.66
PRT1YOR361C ZRG17P53735 605 aa4.67□□□□□ -1.66
PRT1YOR361C SPR6Q01684 191 aa4.67□□□□□ -1.66
PRT1YOR361C SEC13Q04491 297 aaKnown RBP4.67□□□□□ -1.66
PRT1YOR361C ARR2Q06597 130 aa4.67□□□□□ -1.66
PRT1YOR361C RGT2Q12300 763 aa4.67□□□□□ -1.66
PRT1YOR361C HIS1P00498 297 aaKnown RBP4.66□□□□□ -1.66
PRT1YOR361C RPL31AP0C2H8 113 aaKnown RBP4.66□□□□□ -1.66
PRT1YOR361C YBR121C-AP0C5L4 52 aa4.66□□□□□ -1.66
PRT1YOR361C MRP1P10662 321 aaKnown RBP4.66□□□□□ -1.66
PRT1YOR361C COQ3P27680 312 aa4.66□□□□□ -1.66
PRT1YOR361C YEF1P32622 495 aa4.66□□□□□ -1.66
PRT1YOR361C FRE2P36033 711 aa4.66□□□□□ -1.66
PRT1YOR361C PHD1P36093 366 aa4.66□□□□□ -1.66
PRT1YOR361C SEC72P39742 193 aaKnown RBP4.66□□□□□ -1.66
PRT1YOR361C CSM2P40465 213 aa4.66□□□□□ -1.66
PRT1YOR361C YIL001WP40560 513 aa4.66□□□□□ -1.66
PRT1YOR361C KIN4Q01919 800 aa4.66□□□□□ -1.66
PRT1YOR361C YPL077CQ02831 240 aa4.66□□□□□ -1.66
PRT1YOR361C IRC4Q03036 179 aa4.66□□□□□ -1.66
PRT1YOR361C CTL1Q03220 320 aaKnown RBP4.66□□□□□ -1.66
PRT1YOR361C ASR1Q06834 288 aa4.66□□□□□ -1.66
PRT1YOR361C CSM4Q08955 156 aa4.66□□□□□ -1.66
PRT1YOR361C QCR7P00128 127 aa4.66□□□□□ -1.66
PRT1YOR361C POX1P13711 748 aa4.66□□□□□ -1.66
PRT1YOR361C HCM1P25364 564 aa4.66□□□□□ -1.66
PRT1YOR361C FHL1P39521 936 aa4.66□□□□□ -1.66
PRT1YOR361C JHD2P47156 728 aaPredicted RBP4.66□□□□□ -1.66
PRT1YOR361C BET5Q03630 159 aa4.66□□□□□ -1.66
PRT1YOR361C FAR8Q05040 523 aa4.66□□□□□ -1.66
PRT1YOR361C GLO2Q05584 274 aa4.66□□□□□ -1.66
PRT1YOR361C VIK1Q12045 647 aa4.66□□□□□ -1.66
PRT1YOR361C THO1P40040 218 aaKnown RBP4.65□□□□□ -1.66
PRT1YOR361C CAF40P53829 373 aa4.65□□□□□ -1.66
PRT1YOR361C NDE2Q07500 545 aa4.65□□□□□ -1.66
PRT1YOR361C DAP1Q12091 152 aa4.65□□□□□ -1.66
PRT1YOR361C TPT1Q12272 230 aaKnown RBP4.65□□□□□ -1.66
PRT1YOR361C NAM2P11325 894 aa4.65□□□□□ -1.67
PRT1YOR361C YCR100CP25606 316 aa4.65□□□□□ -1.67
PRT1YOR361C RFA3P26755 122 aaKnown RBP4.65□□□□□ -1.67
PRT1YOR361C ZRT1P32804 376 aa4.65□□□□□ -1.67
PRT1YOR361C PAC2P39937 518 aa4.65□□□□□ -1.67
PRT1YOR361C TAD2P47058 250 aa4.65□□□□□ -1.67
PRT1YOR361C BSP1Q06604 576 aa4.65□□□□□ -1.67
PRT1YOR361C HTB1P02293 131 aaKnown RBP4.64□□□□□ -1.67
PRT1YOR361C HTB2P02294 131 aa4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms