RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C YPR015CQ12531 247 aa6.93□□□□□ -1.3
RUP1YOR138C HRP1Q99383 534 aaKnown RBP6.93□□□□□ -1.3
RUP1YOR138C GCN4P03069 281 aa6.93□□□□□ -1.3
RUP1YOR138C CDC9P04819 755 aa6.93□□□□□ -1.3
RUP1YOR138C YGL041W-AP0C5N3 154 aa6.93□□□□□ -1.3
RUP1YOR138C YOL162WP0CF19 215 aa6.93□□□□□ -1.3
RUP1YOR138C ERD2P18414 219 aa6.93□□□□□ -1.3
RUP1YOR138C RPA135P22138 1203 aaKnown RBP6.93□□□□□ -1.3
RUP1YOR138C MSS1P32559 526 aaPredicted RBP6.93□□□□□ -1.3
RUP1YOR138C VMA8P32610 256 aaKnown RBP6.93□□□□□ -1.3
RUP1YOR138C MTC2P34246 357 aa6.93□□□□□ -1.3
RUP1YOR138C YHR122WP38829 231 aa6.93□□□□□ -1.3
RUP1YOR138C RFC4P40339 323 aaKnown RBP6.93□□□□□ -1.3
RUP1YOR138C QDR1P40475 563 aa6.93□□□□□ -1.3
RUP1YOR138C PKP1P40530 394 aa6.93□□□□□ -1.3
RUP1YOR138C PSA1P41940 361 aaKnown RBP6.93□□□□□ -1.3
RUP1YOR138C DPB11P47027 764 aaPredicted RBP6.93□□□□□ -1.3
RUP1YOR138C AIM25P47140 327 aa6.93□□□□□ -1.3
RUP1YOR138C TOS2P50078 622 aa6.93□□□□□ -1.3
RUP1YOR138C FLC3P53121 802 aa6.93□□□□□ -1.3
RUP1YOR138C EAR1Q03212 550 aa6.93□□□□□ -1.3
RUP1YOR138C CTL1Q03220 320 aaKnown RBP6.93□□□□□ -1.3
RUP1YOR138C SCS7Q03529 384 aa6.93□□□□□ -1.3
RUP1YOR138C TMN2Q04562 672 aa6.93□□□□□ -1.3
RUP1YOR138C RRN11Q04712 507 aa6.93□□□□□ -1.3
RUP1YOR138C COX20Q04935 205 aa6.93□□□□□ -1.3
RUP1YOR138C EAF1Q06337 982 aa6.93□□□□□ -1.3
RUP1YOR138C SYC1Q08553 188 aaPredicted RBP6.93□□□□□ -1.3
RUP1YOR138C TPO4Q12256 659 aa6.93□□□□□ -1.3
RUP1YOR138C ATP14Q12349 124 aa6.93□□□□□ -1.3
RUP1YOR138C RDI1Q12434 202 aa6.93□□□□□ -1.3
RUP1YOR138C PRP28P23394 588 aa6.92□□□□□ -1.3
RUP1YOR138C YCP4P25349 247 aaKnown RBP6.92□□□□□ -1.3
RUP1YOR138C YCR100CP25606 316 aa6.92□□□□□ -1.3
RUP1YOR138C ORC2P32833 620 aa6.92□□□□□ -1.3
RUP1YOR138C PAU24P38155 120 aa6.92□□□□□ -1.3
RUP1YOR138C MSS4P38994 779 aa6.92□□□□□ -1.3
RUP1YOR138C RGA1P39083 1007 aa6.92□□□□□ -1.3
RUP1YOR138C GID8P40208 455 aa6.92□□□□□ -1.3
RUP1YOR138C SDP1P40479 209 aa6.92□□□□□ -1.3
RUP1YOR138C UBC9P50623 157 aaPredicted RBP6.92□□□□□ -1.3
RUP1YOR138C ART5P53244 586 aaKnown RBP6.92□□□□□ -1.3
RUP1YOR138C PLM2Q04383 521 aa6.92□□□□□ -1.3
RUP1YOR138C NAT4Q04751 285 aa6.92□□□□□ -1.3
RUP1YOR138C ROY1Q04847 553 aa6.92□□□□□ -1.3
RUP1YOR138C PIB1Q06651 286 aa6.92□□□□□ -1.3
RUP1YOR138C AAC1P04710 309 aa6.91□□□□□ -1.3
RUP1YOR138C YKR104WP0CE69 306 aa6.91□□□□□ -1.3
RUP1YOR138C RAM1P22007 431 aa6.91□□□□□ -1.3
RUP1YOR138C ACB1P31787 87 aa6.91□□□□□ -1.3
RUP1YOR138C ANR2P36090 516 aaPredicted RBP6.91□□□□□ -1.3
RUP1YOR138C APL3P38065 1025 aa6.91□□□□□ -1.3
RUP1YOR138C DTR1P38125 572 aa6.91□□□□□ -1.3
RUP1YOR138C ECM34P38728 170 aa6.91□□□□□ -1.3
RUP1YOR138C MED6P38782 295 aa6.91□□□□□ -1.3
RUP1YOR138C AXL2P38928 823 aa6.91□□□□□ -1.3
RUP1YOR138C DOC1P53068 250 aa6.91□□□□□ -1.3
RUP1YOR138C HOS2P53096 452 aaPredicted RBP6.91□□□□□ -1.3
RUP1YOR138C SLI1P53304 468 aa6.91□□□□□ -1.3
RUP1YOR138C TGL2P54857 326 aa6.91□□□□□ -1.3
RUP1YOR138C YMR310CQ04867 317 aaPredicted RBP6.91□□□□□ -1.3
RUP1YOR138C RSF1Q05043 376 aa6.91□□□□□ -1.3
RUP1YOR138C RBS1Q05672 457 aaKnown RBP6.91□□□□□ -1.3
RUP1YOR138C YBR085C-AO43137 85 aa6.91□□□□□ -1.3
RUP1YOR138C BAR1P12630 587 aa6.91□□□□□ -1.3
RUP1YOR138C NAM9P27929 486 aa6.91□□□□□ -1.3
RUP1YOR138C KRE6P32486 720 aa6.91□□□□□ -1.3
RUP1YOR138C TCD2P36101 447 aaKnown RBP6.91□□□□□ -1.3
RUP1YOR138C TAT1P38085 619 aa6.91□□□□□ -1.3
RUP1YOR138C PTI1P39927 425 aaPredicted RBP6.91□□□□□ -1.3
RUP1YOR138C ALB1P47019 175 aaPredicted RBP6.91□□□□□ -1.3
RUP1YOR138C AAD10P47182 288 aa6.91□□□□□ -1.3
RUP1YOR138C PMT5P52867 743 aa6.91□□□□□ -1.3
RUP1YOR138C NPY1P53164 384 aa6.91□□□□□ -1.3
RUP1YOR138C PAU12P53343 120 aa6.91□□□□□ -1.3
RUP1YOR138C PRM15Q03262 622 aa6.91□□□□□ -1.3
RUP1YOR138C SOD2P00447 233 aa6.9□□□□□ -1.3
RUP1YOR138C STE12P13574 688 aa6.9□□□□□ -1.3
RUP1YOR138C HOP1P20050 605 aa6.9□□□□□ -1.3
RUP1YOR138C PHO80P20052 293 aa6.9□□□□□ -1.3
RUP1YOR138C MAG1P22134 296 aaKnown RBP6.9□□□□□ -1.3
RUP1YOR138C AGP1P25376 633 aa6.9□□□□□ -1.3
RUP1YOR138C ITR1P30605 584 aa6.9□□□□□ -1.3
RUP1YOR138C THI2P38141 450 aa6.9□□□□□ -1.3
RUP1YOR138C YHR097CP38809 366 aaKnown RBP6.9□□□□□ -1.3
RUP1YOR138C CAT5P41735 233 aa6.9□□□□□ -1.3
RUP1YOR138C BAP3P41815 604 aa6.9□□□□□ -1.3
RUP1YOR138C FAA4P47912 694 aaKnown RBP6.9□□□□□ -1.3
RUP1YOR138C VBA1Q04301 562 aa6.9□□□□□ -1.3
RUP1YOR138C UTP21Q06078 939 aaPredicted RBP6.9□□□□□ -1.3
RUP1YOR138C ATP16Q12165 160 aa6.9□□□□□ -1.3
RUP1YOR138C MMP1Q12372 583 aa6.9□□□□□ -1.3
RUP1YOR138C RPS21BQ3E754 87 aaKnown RBP6.9□□□□□ -1.3
RUP1YOR138C CKS1P20486 150 aaKnown RBP6.89□□□□□ -1.31
RUP1YOR138C BOS1P25385 244 aa6.89□□□□□ -1.31
RUP1YOR138C ADE1P27616 306 aa6.89□□□□□ -1.31
RUP1YOR138C MRPL36P36531 177 aa6.89□□□□□ -1.31
RUP1YOR138C CCZ1P38273 704 aa6.89□□□□□ -1.31
RUP1YOR138C DED81P38707 554 aaKnown RBP6.89□□□□□ -1.31
RUP1YOR138C PEX28P38848 579 aa6.89□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 157.2 ms