RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W YHR182WP38870 785 aa1.96□□□□□ -2.1
RRP6YOR001W NPT1P39683 429 aaKnown RBP1.96□□□□□ -2.1
RRP6YOR001W SHQ1P40486 507 aaPredicted RBP1.96□□□□□ -2.1
RRP6YOR001W YIR016WP40572 265 aa1.96□□□□□ -2.1
RRP6YOR001W TES1P41903 349 aaKnown RBP1.96□□□□□ -2.1
RRP6YOR001W AGP3P43548 558 aa1.96□□□□□ -2.1
RRP6YOR001W KEL2P50090 882 aa1.96□□□□□ -2.1
RRP6YOR001W STP1Q00947 519 aa1.96□□□□□ -2.1
RRP6YOR001W YDR415CQ04033 374 aaPredicted RBP1.96□□□□□ -2.1
RRP6YOR001W YMR027WQ04371 470 aa1.96□□□□□ -2.1
RRP6YOR001W YPL199CQ08954 240 aa1.96□□□□□ -2.1
RRP6YOR001W THP3Q12049 470 aaKnown RBP1.96□□□□□ -2.1
RRP6YOR001W YCR024C-BQ3E7Z8 88 aa1.96□□□□□ -2.1
RRP6YOR001W RAD7P06779 565 aa1.95□□□□□ -2.1
RRP6YOR001W PRB1P09232 635 aa1.95□□□□□ -2.1
RRP6YOR001W MTF1P14908 341 aaKnown RBP1.95□□□□□ -2.1
RRP6YOR001W PTP1P25044 335 aa1.95□□□□□ -2.1
RRP6YOR001W RVS161P25343 265 aaKnown RBP1.95□□□□□ -2.1
RRP6YOR001W CSM1P25651 190 aa1.95□□□□□ -2.1
RRP6YOR001W RPS5P26783 225 aaKnown RBP1.95□□□□□ -2.1
RRP6YOR001W ICL1P28240 557 aaPredicted RBP1.95□□□□□ -2.1
RRP6YOR001W CWP1P28319 239 aa1.95□□□□□ -2.1
RRP6YOR001W MEI5P32489 222 aa1.95□□□□□ -2.1
RRP6YOR001W KAR9P32526 644 aa1.95□□□□□ -2.1
RRP6YOR001W MUD1P32605 298 aaKnown RBP1.95□□□□□ -2.1
RRP6YOR001W YHR035WP38769 630 aa1.95□□□□□ -2.1
RRP6YOR001W YHK8P38776 514 aa1.95□□□□□ -2.1
RRP6YOR001W YPT35P38815 214 aaKnown RBP1.95□□□□□ -2.1
RRP6YOR001W RPH1P39956 796 aa1.95□□□□□ -2.1
RRP6YOR001W PCI8P40512 444 aa1.95□□□□□ -2.1
RRP6YOR001W BNA6P43619 295 aa1.95□□□□□ -2.1
RRP6YOR001W LSG1P53145 640 aaKnown RBP1.95□□□□□ -2.1
RRP6YOR001W KTR6P54070 446 aa1.95□□□□□ -2.1
RRP6YOR001W YLR012CQ07927 99 aa1.95□□□□□ -2.1
RRP6YOR001W SAM4Q08985 325 aaKnown RBP1.95□□□□□ -2.1
RRP6YOR001W RAD3P06839 778 aa1.95□□□□□ -2.1
RRP6YOR001W RPL20AP0CX23 172 aaKnown RBP1.95□□□□□ -2.1
RRP6YOR001W RPL20BP0CX24 172 aaPredicted RBP1.95□□□□□ -2.1
RRP6YOR001W AIM29P36154 155 aa1.95□□□□□ -2.1
RRP6YOR001W PRS4P38063 326 aaPredicted RBP1.95□□□□□ -2.1
RRP6YOR001W RIB5P38145 238 aa1.95□□□□□ -2.1
RRP6YOR001W YBP1P38315 674 aa1.95□□□□□ -2.1
RRP6YOR001W TCD1P38756 429 aa1.95□□□□□ -2.1
RRP6YOR001W HEM14P40012 539 aa1.95□□□□□ -2.1
RRP6YOR001W YGR210CP42942 411 aa1.95□□□□□ -2.1
RRP6YOR001W AIM24P47127 394 aa1.95□□□□□ -2.1
RRP6YOR001W RAD17P48581 401 aa1.95□□□□□ -2.1
RRP6YOR001W SEH1P53011 349 aaKnown RBP1.95□□□□□ -2.1
RRP6YOR001W YPL077CQ02831 240 aa1.95□□□□□ -2.1
RRP6YOR001W MRPS17Q03246 237 aaPredicted RBP1.95□□□□□ -2.1
RRP6YOR001W TDA1Q03533 586 aa1.95□□□□□ -2.1
RRP6YOR001W NDE2Q07500 545 aa1.95□□□□□ -2.1
RRP6YOR001W YDL114WQ07530 308 aa1.95□□□□□ -2.1
RRP6YOR001W LOT6Q07923 191 aa1.95□□□□□ -2.1
RRP6YOR001W SDO1Q07953 250 aaKnown RBP1.95□□□□□ -2.1
RRP6YOR001W BSC6Q08280 497 aa1.95□□□□□ -2.1
RRP6YOR001W RPN6Q12377 434 aa1.95□□□□□ -2.1
RRP6YOR001W YOS9Q99220 542 aa1.95□□□□□ -2.1
RRP6YOR001W TDH2P00358 332 aaKnown RBP1.94□□□□□ -2.1
RRP6YOR001W MET16P18408 261 aaPredicted RBP1.94□□□□□ -2.1
RRP6YOR001W POP5P28005 173 aa1.94□□□□□ -2.1
RRP6YOR001W FUN26P31381 517 aa1.94□□□□□ -2.1
RRP6YOR001W TMT1P32643 299 aa1.94□□□□□ -2.1
RRP6YOR001W RAD5P32849 1169 aaPredicted RBP1.94□□□□□ -2.1
RRP6YOR001W CBF5P33322 483 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
RRP6YOR001W CAB3P36076 571 aa1.94□□□□□ -2.1
RRP6YOR001W MET30P39014 640 aa1.94□□□□□ -2.1
RRP6YOR001W COX14P39103 70 aa1.94□□□□□ -2.1
RRP6YOR001W YIL169CP40442 995 aa1.94□□□□□ -2.1
RRP6YOR001W CIN2P46670 268 aa1.94□□□□□ -2.1
RRP6YOR001W PMT4P46971 762 aa1.94□□□□□ -2.1
RRP6YOR001W YJL118WP47022 219 aa1.94□□□□□ -2.1
RRP6YOR001W TIS11P47977 285 aa1.94□□□□□ -2.1
RRP6YOR001W SCW4P53334 386 aaKnown RBP1.94□□□□□ -2.1
RRP6YOR001W TRM112P53738 135 aaPredicted RBP1.94□□□□□ -2.1
RRP6YOR001W CDC14Q00684 551 aa1.94□□□□□ -2.1
RRP6YOR001W SED5Q01590 340 aa1.94□□□□□ -2.1
RRP6YOR001W YPL080CQ02826 108 aa1.94□□□□□ -2.1
RRP6YOR001W INP2Q03824 705 aa1.94□□□□□ -2.1
RRP6YOR001W PRM6Q04705 352 aa1.94□□□□□ -2.1
RRP6YOR001W FMP42Q04991 504 aa1.94□□□□□ -2.1
RRP6YOR001W DAP1Q12091 152 aa1.94□□□□□ -2.1
RRP6YOR001W CDC42P19073 191 aa1.94□□□□□ -2.1
RRP6YOR001W RPO26P20435 155 aa1.94□□□□□ -2.1
RRP6YOR001W YCR016WP25617 290 aaKnown RBP1.94□□□□□ -2.1
RRP6YOR001W ITR2P30606 609 aa1.94□□□□□ -2.1
RRP6YOR001W KRE6P32486 720 aa1.94□□□□□ -2.1
RRP6YOR001W NUP2P32499 720 aa1.94□□□□□ -2.1
RRP6YOR001W CYM1P32898 989 aa1.94□□□□□ -2.1
RRP6YOR001W AVT5P38176 459 aa1.94□□□□□ -2.1
RRP6YOR001W FHL1P39521 936 aa1.94□□□□□ -2.1
RRP6YOR001W AIM10P39965 576 aaKnown RBP1.94□□□□□ -2.1
RRP6YOR001W COA1P40452 197 aa1.94□□□□□ -2.1
RRP6YOR001W CGR1P53188 120 aa1.94□□□□□ -2.1
RRP6YOR001W MTM1P53320 366 aa1.94□□□□□ -2.1
RRP6YOR001W GOR1P53839 350 aa1.94□□□□□ -2.1
RRP6YOR001W IRC4Q03036 179 aa1.94□□□□□ -2.1
RRP6YOR001W YMR209CQ03648 457 aa1.94□□□□□ -2.1
RRP6YOR001W KRE28Q04431 385 aa1.94□□□□□ -2.1
RRP6YOR001W ADH6Q04894 360 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms