RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W RAD23P32628 398 aaKnown RBP2.7□□□□□ -1.98
SEC28YIL076W SRB2P34162 210 aa2.7□□□□□ -1.98
SEC28YIL076W YJL055WP47044 245 aa2.7□□□□□ -1.98
SEC28YIL076W EFM3P47163 339 aa2.7□□□□□ -1.98
SEC28YIL076W YML6P51998 286 aa2.7□□□□□ -1.98
SEC28YIL076W YPR078CQ06813 372 aa2.7□□□□□ -1.98
SEC28YIL076W MMT2Q08970 484 aa2.7□□□□□ -1.98
SEC28YIL076W BGL2P15703 313 aaKnown RBP2.69□□□□□ -1.98
SEC28YIL076W VAM7P32912 316 aa2.69□□□□□ -1.98
SEC28YIL076W CBF5P33322 483 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
SEC28YIL076W YHR182WP38870 785 aa2.69□□□□□ -1.98
SEC28YIL076W LYS12P40495 371 aaKnown RBP2.69□□□□□ -1.98
SEC28YIL076W YIL059CP40520 121 aa2.69□□□□□ -1.98
SEC28YIL076W COS4P43542 379 aa2.69□□□□□ -1.98
SEC28YIL076W MOB2P43563 287 aa2.69□□□□□ -1.98
SEC28YIL076W TRM82Q03774 444 aa2.69□□□□□ -1.98
SEC28YIL076W FAR10Q06001 478 aa2.69□□□□□ -1.98
SEC28YIL076W HRT1Q08273 121 aa2.69□□□□□ -1.98
SEC28YIL076W FRE8Q12209 686 aa2.69□□□□□ -1.98
SEC28YIL076W SSN2P38931 1420 aa2.68□□□□□ -1.98
SEC28YIL076W YCF1P39109 1515 aaKnown RBP2.68□□□□□ -1.98
SEC28YIL076W BDH1P39714 382 aa2.68□□□□□ -1.98
SEC28YIL076W SCS7Q03529 384 aa2.68□□□□□ -1.98
SEC28YIL076W YDL211CQ12121 372 aa2.68□□□□□ -1.98
SEC28YIL076W UBA3Q99344 299 aa2.68□□□□□ -1.98
SEC28YIL076W SSK2P53599 1579 aa2.68□□□□□ -1.98
SEC28YIL076W SIN3P22579 1536 aa2.68□□□□□ -1.98
SEC28YIL076W DBR1P24309 405 aaKnown RBP2.67□□□□□ -1.98
SEC28YIL076W TIP20P33891 701 aa2.67□□□□□ -1.98
SEC28YIL076W YPT35P38815 214 aaKnown RBP2.67□□□□□ -1.98
SEC28YIL076W RET3P53600 189 aa2.67□□□□□ -1.98
SEC28YIL076W SUR7P54003 302 aa2.67□□□□□ -1.98
SEC28YIL076W SKI3P17883 1432 aaKnown RBP2.67□□□□□ -1.98
SEC28YIL076W TAF2P23255 1407 aa2.67□□□□□ -1.98
SEC28YIL076W COX10P21592 462 aa2.66□□□□□ -1.98
SEC28YIL076W PSO2P30620 661 aa2.66□□□□□ -1.98
SEC28YIL076W MSK1P32048 576 aa2.66□□□□□ -1.98
SEC28YIL076W UFD4P33202 1483 aa2.65□□□□□ -1.98
SEC28YIL076W FAR1P21268 830 aa2.65□□□□□ -1.99
SEC28YIL076W EFB1P32471 206 aaKnown RBP2.65□□□□□ -1.99
SEC28YIL076W PXA2P34230 853 aa2.65□□□□□ -1.99
SEC28YIL076W MPE1P35728 441 aaKnown RBP2.65□□□□□ -1.99
SEC28YIL076W NAS6P50086 228 aa2.65□□□□□ -1.99
SEC28YIL076W YOL075CQ08234 1294 aa2.65□□□□□ -1.99
SEC28YIL076W PEX27Q08580 376 aa2.65□□□□□ -1.99
SEC28YIL076W ESP1Q03018 1630 aa2.64□□□□□ -1.99
SEC28YIL076W BNI1P41832 1953 aa2.64□□□□□ -1.99
SEC28YIL076W LCP5P40079 357 aaPredicted RBP2.64□□□□□ -1.99
SEC28YIL076W YJL144WP47009 104 aa2.64□□□□□ -1.99
SEC28YIL076W PRM1P53835 661 aa2.64□□□□□ -1.99
SEC28YIL076W AIM33Q04516 312 aa2.64□□□□□ -1.99
SEC28YIL076W APC4Q04601 652 aa2.64□□□□□ -1.99
SEC28YIL076W YDR018CQ12185 396 aa2.64□□□□□ -1.99
SEC28YIL076W PAR32Q12515 295 aaKnown RBP2.64□□□□□ -1.99
SEC28YIL076W MET5P47169 1442 aa2.64□□□□□ -1.99
SEC28YIL076W DNF1P32660 1571 aa2.64□□□□□ -1.99
SEC28YIL076W MNE1P24720 663 aa2.63□□□□□ -1.99
SEC28YIL076W YMR262WP38430 313 aa2.63□□□□□ -1.99
SEC28YIL076W EPL1P43572 832 aa2.63□□□□□ -1.99
SEC28YIL076W LST7P53237 242 aa2.63□□□□□ -1.99
SEC28YIL076W VTI1Q04338 217 aa2.63□□□□□ -1.99
SEC28YIL076W ALE1Q08548 619 aa2.63□□□□□ -1.99
SEC28YIL076W RPO31P04051 1460 aa2.63□□□□□ -1.99
SEC28YIL076W CHD1P32657 1468 aa2.63□□□□□ -1.99
SEC28YIL076W SCC2Q04002 1493 aa2.63□□□□□ -1.99
SEC28YIL076W YPK9Q12697 1472 aa2.63□□□□□ -1.99
SEC28YIL076W TY1B-BRQ12193 1756 aa2.62□□□□□ -1.99
SEC28YIL076W TY1B-GR3Q12316 1755 aa2.62□□□□□ -1.99
SEC28YIL076W TY1B-ORQ92393 1755 aa2.62□□□□□ -1.99
SEC28YIL076W YPR096CO13587 100 aa2.62□□□□□ -1.99
SEC28YIL076W URA10P30402 227 aa2.62□□□□□ -1.99
SEC28YIL076W TAE1P38340 232 aa2.62□□□□□ -1.99
SEC28YIL076W SNL1P40548 159 aa2.62□□□□□ -1.99
SEC28YIL076W SMD1Q02260 146 aaPredicted RBP2.62□□□□□ -1.99
SEC28YIL076W UTP15Q04305 513 aaKnown RBP2.62□□□□□ -1.99
SEC28YIL076W MYO2P19524 1574 aaKnown RBP2.61□□□□□ -1.99
SEC28YIL076W TY2B-LR1P0C2J3 1770 aa2.61□□□□□ -1.99
SEC28YIL076W TY2B-FP0CX63 1770 aa2.61□□□□□ -1.99
SEC28YIL076W TY2B-GR2P0CX64 1770 aa2.61□□□□□ -1.99
SEC28YIL076W TY2B-CP25384 1770 aa2.61□□□□□ -1.99
SEC28YIL076W TY2B-DR2Q03494 1770 aa2.61□□□□□ -1.99
SEC28YIL076W TY1B-DR1Q03855 1755 aa2.61□□□□□ -1.99
SEC28YIL076W TY2B-DR3Q07791 1770 aaKnown RBP2.61□□□□□ -1.99
SEC28YIL076W TY2B-OR1Q12113 1770 aa2.61□□□□□ -1.99
SEC28YIL076W TY2B-DR1Q12472 1770 aa2.61□□□□□ -1.99
SEC28YIL076W TY2B-OR2Q12501 1770 aa2.61□□□□□ -1.99
SEC28YIL076W SAL1D6W196 494 aa2.61□□□□□ -1.99
SEC28YIL076W RPS23AP0CX29 145 aaKnown RBP2.61□□□□□ -1.99
SEC28YIL076W RPS23BP0CX30 145 aa2.61□□□□□ -1.99
SEC28YIL076W RPS16AP0CX51 143 aaKnown RBP2.61□□□□□ -1.99
SEC28YIL076W RPS16BP0CX52 143 aaKnown RBP2.61□□□□□ -1.99
SEC28YIL076W PEX5P35056 612 aa2.61□□□□□ -1.99
SEC28YIL076W YKL071WP36086 256 aa2.61□□□□□ -1.99
SEC28YIL076W YBL028CP38202 106 aa2.61□□□□□ -1.99
SEC28YIL076W EFM1P38732 585 aa2.61□□□□□ -1.99
SEC28YIL076W ATG7P38862 630 aa2.61□□□□□ -1.99
SEC28YIL076W RBG1P39729 369 aa2.61□□□□□ -1.99
SEC28YIL076W YFR018CP43599 363 aa2.61□□□□□ -1.99
SEC28YIL076W MLC1P53141 149 aa2.61□□□□□ -1.99
SEC28YIL076W NRM1P53718 249 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms