RNA–Protein interactions for RNA: YIL038C

NOT3, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeast

Gene NOT3, Length 2,511 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOT3	YIL038C	SEF1	P34228	1148 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	NTR2	P36118	322 aa	Predicted RBP	4.88	□□□□□ -1.63
NOT3	YIL038C	GIP4	P39732	760 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	PRM10	P42946	383 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	LOC1	P43586	204 aa	Predicted RBP	4.88	□□□□□ -1.63
NOT3	YIL038C	FAR7	P43592	221 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	IDS2	P46958	469 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	KEL2	P50090	882 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	UBC11	P52492	156 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	COX18	P53239	316 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	RHO5	P53879	331 aa	Known RBP	4.88	□□□□□ -1.63
NOT3	YIL038C	REX2	P54964	269 aa	Known RBP	4.88	□□□□□ -1.63
NOT3	YIL038C	YET2	Q04210	160 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	YMR310C	Q04867	317 aa	Predicted RBP	4.88	□□□□□ -1.63
NOT3	YIL038C	ARO10	Q06408	635 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	YOL107W	Q12239	342 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	YOR214C	Q12282	236 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	YKL033W-A	Q86ZR7	236 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	LAG2	Q92325	660 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	MED11	Q99278	115 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	RPL24A	P04449	155 aa	Known RBP	4.88	□□□□□ -1.63
NOT3	YIL038C	SNF4	P12904	322 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	BUB3	P26449	341 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	YIM1	P28625	365 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	FAA1	P30624	700 aa	Known RBP	4.88	□□□□□ -1.63
NOT3	YIL038C	SLM4	P38247	162 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	SOP4	P39543	234 aa	Predicted RBP	4.88	□□□□□ -1.63
NOT3	YIL038C	RGI1	P40043	161 aa	Predicted RBP	4.88	□□□□□ -1.63
NOT3	YIL038C	DDI1	P40087	428 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	HPM1	P40481	377 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	ELP2	P42935	788 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	BIO3	P50277	480 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	COG7	P53195	279 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	YGR266W	P53326	701 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	FRE4	P53746	719 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	YLR456W	Q06199	204 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	GPI11	Q06636	219 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	YOL131W	Q08270	108 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	YOR342C	Q12182	319 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	TRM10	Q12400	293 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	MEX67	Q99257	599 aa	Known RBP	4.88	□□□□□ -1.63
NOT3	YIL038C	RPS14A	P06367	137 aa	Known RBP	4.87	□□□□□ -1.63
NOT3	YIL038C	HIP1	P06775	603 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	CDC21	P06785	304 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	GAL7	P08431	366 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	ZUO1	P32527	433 aa	Known RBP	4.87	□□□□□ -1.63
NOT3	YIL038C	SSO1	P32867	290 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	PTC1	P35182	281 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	ELF1	P36053	145 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	DAD2	P36162	133 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	RPS14B	P39516	138 aa	Known RBP	4.87	□□□□□ -1.63
NOT3	YIL038C	YRB2	P40517	327 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	YRB1	P41920	201 aa	Known RBP	4.87	□□□□□ -1.63
NOT3	YIL038C	YGR201C	P42936	225 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	SPR6	Q01684	191 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	SEC13	Q04491	297 aa	Known RBP	4.87	□□□□□ -1.63
NOT3	YIL038C	ASA1	Q06822	443 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	YDL114W	Q07530	308 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	FRE5	Q08908	694 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	YPL119C-A	Q3E751	87 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	AAC1	P04710	309 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	PRP21	P32524	280 aa	Predicted RBP	4.87	□□□□□ -1.63
NOT3	YIL038C	YOR062C	P36025	268 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	SPO73	P40031	143 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	BUR6	P40096	142 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	OCA1	P50946	238 aa	Predicted RBP	4.87	□□□□□ -1.63
NOT3	YIL038C	EGD1	Q02642	157 aa	Known RBP	4.87	□□□□□ -1.63
NOT3	YIL038C	RSM28	Q03430	361 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	RIF2	Q06208	395 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	YPL245W	Q12179	454 aa	Known RBP	4.87	□□□□□ -1.63
NOT3	YIL038C	HER1	Q12276	1246 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	YDL199C	Q12407	687 aa		4.87	□□□□□ -1.63
NOT3	YIL038C	YMR084W	A2P2R3	262 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	QCR7	P00128	127 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	RAS2	P01120	322 aa	Known RBP	4.86	□□□□□ -1.63
NOT3	YIL038C	MGM101	P32787	269 aa	Known RBP	4.86	□□□□□ -1.63
NOT3	YIL038C	ATO2	P32907	282 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	TRM7	P38238	310 aa	Known RBP	4.86	□□□□□ -1.63
NOT3	YIL038C	YBR285W	P38354	144 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	PRP39	P39682	629 aa	Known RBP	4.86	□□□□□ -1.63
NOT3	YIL038C	PTR3	P43606	678 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	VPS73	P53142	486 aa	Known RBP	4.86	□□□□□ -1.63
NOT3	YIL038C	YPL108W	Q02872	168 aa	Predicted RBP	4.86	□□□□□ -1.63
NOT3	YIL038C	NTO1	Q12311	748 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	COX1	P00401	534 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	BUD5	P25300	642 aa	Predicted RBP	4.86	□□□□□ -1.63
NOT3	YIL038C	YME2	P32843	850 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	ARA1	P38115	344 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	WSC4	P38739	605 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	ALP1	P38971	573 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	PLB1	P39105	664 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	PRE6	P40303	254 aa	Known RBP	4.86	□□□□□ -1.63
NOT3	YIL038C	APQ12	P40532	138 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	SEC27	P41811	889 aa	Known RBP	4.86	□□□□□ -1.63
NOT3	YIL038C	GCN20	P43535	752 aa	Known RBP	4.86	□□□□□ -1.63
NOT3	YIL038C	HOC1	P47124	396 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	PAC10	P48363	199 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	VAC7	P53950	1165 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	SMA2	Q04658	369 aa		4.86	□□□□□ -1.63
NOT3	YIL038C	NOP12	Q08208	459 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms