RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	NAT1	P12945	854 aa	Known RBP	1.7	□□□□□ -2.14
DOT6	YER088C	ANP1	P32629	500 aa		1.7	□□□□□ -2.14
DOT6	YER088C	MDL1	P33310	695 aa		1.7	□□□□□ -2.14
DOT6	YER088C	YPT35	P38815	214 aa	Known RBP	1.7	□□□□□ -2.14
DOT6	YER088C	YHR177W	P38867	453 aa		1.7	□□□□□ -2.14
DOT6	YER088C	PIB2	P53191	635 aa		1.7	□□□□□ -2.14
DOT6	YER088C	CRH1	P53301	507 aa		1.7	□□□□□ -2.14
DOT6	YER088C	YNL134C	P53912	376 aa	Known RBP	1.7	□□□□□ -2.14
DOT6	YER088C	SUE1	Q06524	206 aa		1.7	□□□□□ -2.14
DOT6	YER088C	NDE2	Q07500	545 aa		1.7	□□□□□ -2.14
DOT6	YER088C	LOT6	Q07923	191 aa		1.7	□□□□□ -2.14
DOT6	YER088C	SMC5	Q08204	1093 aa		1.7	□□□□□ -2.14
DOT6	YER088C	HIF1	Q12373	385 aa		1.7	□□□□□ -2.14
DOT6	YER088C	YCR024C-B	Q3E7Z8	88 aa		1.7	□□□□□ -2.14
DOT6	YER088C	IRA1	P18963	3092 aa		1.7	□□□□□ -2.14
DOT6	YER088C	BRR2	P32639	2163 aa	Known RBP	1.69	□□□□□ -2.14
DOT6	YER088C	NAM2	P11325	894 aa		1.69	□□□□□ -2.14
DOT6	YER088C	RNA1	P11745	407 aa	Known RBP	1.69	□□□□□ -2.14
DOT6	YER088C	RRP7	P25368	297 aa	Predicted RBP	1.69	□□□□□ -2.14
DOT6	YER088C	FUN26	P31381	517 aa		1.69	□□□□□ -2.14
DOT6	YER088C	VPH1	P32563	840 aa	Known RBP	1.69	□□□□□ -2.14
DOT6	YER088C	COY1	P34237	679 aa		1.69	□□□□□ -2.14
DOT6	YER088C	SPT10	P35208	640 aa		1.69	□□□□□ -2.14
DOT6	YER088C	HMT1	P38074	348 aa		1.69	□□□□□ -2.14
DOT6	YER088C	PAC11	P40960	533 aa		1.69	□□□□□ -2.14
DOT6	YER088C	SPR6	Q01684	191 aa		1.69	□□□□□ -2.14
DOT6	YER088C	ADA2	Q02336	434 aa		1.69	□□□□□ -2.14
DOT6	YER088C	YDR541C	Q03049	344 aa		1.69	□□□□□ -2.14
DOT6	YER088C	YDL114W	Q07530	308 aa		1.69	□□□□□ -2.14
DOT6	YER088C	MCT1	Q12283	360 aa		1.69	□□□□□ -2.14
DOT6	YER088C	PAR32	Q12515	295 aa	Known RBP	1.69	□□□□□ -2.14
DOT6	YER088C	RAD50	P12753	1312 aa		1.69	□□□□□ -2.14
DOT6	YER088C	RPS14A	P06367	137 aa	Known RBP	1.69	□□□□□ -2.14
DOT6	YER088C	AAT2	P23542	418 aa	Known RBP	1.69	□□□□□ -2.14
DOT6	YER088C	CHA1	P25379	360 aa	Known RBP	1.69	□□□□□ -2.14
DOT6	YER088C	MRP21	P38175	177 aa		1.69	□□□□□ -2.14
DOT6	YER088C	RXT2	P38255	430 aa		1.69	□□□□□ -2.14
DOT6	YER088C	RPS14B	P39516	138 aa	Known RBP	1.69	□□□□□ -2.14
DOT6	YER088C	OXA1	P39952	402 aa		1.69	□□□□□ -2.14
DOT6	YER088C	BIR1	P47134	954 aa		1.69	□□□□□ -2.14
DOT6	YER088C	RTT102	P53330	157 aa		1.69	□□□□□ -2.14
DOT6	YER088C	YET2	Q04210	160 aa		1.69	□□□□□ -2.14
DOT6	YER088C	YPR091C	Q06833	770 aa		1.69	□□□□□ -2.14
DOT6	YER088C	YOP1	Q12402	180 aa		1.69	□□□□□ -2.14
DOT6	YER088C	PDR18	P53756	1333 aa		1.68	□□□□□ -2.14
DOT6	YER088C	PIS1	P06197	220 aa	Known RBP	1.68	□□□□□ -2.14
DOT6	YER088C	HAP2	P06774	265 aa		1.68	□□□□□ -2.14
DOT6	YER088C	MAK31	P23059	88 aa		1.68	□□□□□ -2.14
DOT6	YER088C	MNE1	P24720	663 aa		1.68	□□□□□ -2.14
DOT6	YER088C	BLI1	P35727	113 aa		1.68	□□□□□ -2.14
DOT6	YER088C	OM14	P38325	134 aa		1.68	□□□□□ -2.14
DOT6	YER088C	YER186C	P40101	306 aa		1.68	□□□□□ -2.14
DOT6	YER088C	YFR057W	P43625	151 aa		1.68	□□□□□ -2.14
DOT6	YER088C	IPK1	Q06667	281 aa		1.68	□□□□□ -2.14
DOT6	YER088C	ASA1	Q06822	443 aa		1.68	□□□□□ -2.14
DOT6	YER088C	FCY22	Q12119	530 aa		1.68	□□□□□ -2.14
DOT6	YER088C	EAF3	Q12432	401 aa		1.68	□□□□□ -2.14
DOT6	YER088C	UTP20	P35194	2493 aa	Known RBP	1.68	□□□□□ -2.14
DOT6	YER088C	ARF1	P11076	181 aa	Known RBP	1.67	□□□□□ -2.14
DOT6	YER088C	PRR1	P28708	518 aa		1.67	□□□□□ -2.14
DOT6	YER088C	COX13	P32799	129 aa		1.67	□□□□□ -2.14
DOT6	YER088C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	1.67	□□□□□ -2.14	not detected
DOT6	YER088C	ATM1	P40416	690 aa		1.67	□□□□□ -2.14
DOT6	YER088C	HAC1	P41546	238 aa		1.67	□□□□□ -2.14
DOT6	YER088C	SKI8	Q02793	397 aa	Predicted RBP	1.67	□□□□□ -2.14
DOT6	YER088C	YHC1	Q05900	231 aa	Known RBP	1.67	□□□□□ -2.14
DOT6	YER088C	YDL012C	Q12489	107 aa		1.67	□□□□□ -2.14
DOT6	YER088C	TPK3	P05986	398 aa		1.67	□□□□□ -2.14
DOT6	YER088C	PRB1	P09232	635 aa		1.67	□□□□□ -2.14
DOT6	YER088C	RSA4	P25382	515 aa	Known RBP	1.67	□□□□□ -2.14
DOT6	YER088C	PEX34	P25584	144 aa		1.67	□□□□□ -2.14
DOT6	YER088C	CDC50	P25656	391 aa		1.67	□□□□□ -2.14
DOT6	YER088C	DPH2	P32461	534 aa		1.67	□□□□□ -2.14
DOT6	YER088C	TIR2	P33890	251 aa		1.67	□□□□□ -2.14
DOT6	YER088C	HEM14	P40012	539 aa		1.67	□□□□□ -2.14
DOT6	YER088C	MAM33	P40513	266 aa		1.67	□□□□□ -2.14
DOT6	YER088C	YGR018C	P53211	109 aa		1.67	□□□□□ -2.14
DOT6	YER088C	CLD1	P53264	445 aa		1.67	□□□□□ -2.14
DOT6	YER088C	PRM6	Q04705	352 aa		1.67	□□□□□ -2.14
DOT6	YER088C	YPR078C	Q06813	372 aa		1.67	□□□□□ -2.14
DOT6	YER088C	LDS2	Q08218	356 aa		1.67	□□□□□ -2.14
DOT6	YER088C	DNL4	Q08387	944 aa	Predicted RBP	1.67	□□□□□ -2.14
DOT6	YER088C	YDL199C	Q12407	687 aa		1.67	□□□□□ -2.14
DOT6	YER088C	NAG1	Q8TGN9	163 aa		1.67	□□□□□ -2.14
DOT6	YER088C	PDE2	P06776	526 aa		1.66	□□□□□ -2.14
DOT6	YER088C	SLM5	P25345	492 aa	Known RBP	1.66	□□□□□ -2.14
DOT6	YER088C	PUP2	P32379	260 aa		1.66	□□□□□ -2.14
DOT6	YER088C	CSE1	P33307	960 aa		1.66	□□□□□ -2.14
DOT6	YER088C	SPO23	P33757	523 aa		1.66	□□□□□ -2.14
DOT6	YER088C	PEX5	P35056	612 aa		1.66	□□□□□ -2.14
DOT6	YER088C	MRX3	P38172	270 aa		1.66	□□□□□ -2.14
DOT6	YER088C	SPP381	P38282	291 aa	Predicted RBP	1.66	□□□□□ -2.14
DOT6	YER088C	MNL1	P38888	796 aa		1.66	□□□□□ -2.14
DOT6	YER088C	CIN2	P46670	268 aa		1.66	□□□□□ -2.14
DOT6	YER088C	ASN2	P49090	572 aa	Known RBP	1.66	□□□□□ -2.14
DOT6	YER088C	YIP5	P53108	310 aa		1.66	□□□□□ -2.14
DOT6	YER088C	AAD15	Q08361	143 aa		1.66	□□□□□ -2.14
DOT6	YER088C	COX4	P04037	155 aa		1.66	□□□□□ -2.14
DOT6	YER088C	DAP2	P18962	818 aa		1.66	□□□□□ -2.14
DOT6	YER088C	FPR1	P20081	114 aa	Known RBP	1.66	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms