RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN3YER021W VPS54Q12071 889 aa2.58□□□□□ -2
RPN3YER021W MED2Q12124 431 aa2.58□□□□□ -2
RPN3YER021W RBD2Q12270 262 aa2.58□□□□□ -2
RPN3YER021W ATG34Q12292 412 aa2.58□□□□□ -2
RPN3YER021W ISA2Q12425 185 aa2.58□□□□□ -2
RPN3YER021W MTR10Q99189 972 aa2.58□□□□□ -2
RPN3YER021W MATALPHA2P0CY08 210 aa2.57□□□□□ -2
RPN3YER021W HMLALPHA2P0CY09 210 aa2.57□□□□□ -2
RPN3YER021W ARO3P14843 370 aaKnown RBP2.57□□□□□ -2
RPN3YER021W ALG1P16661 449 aa2.57□□□□□ -2
RPN3YER021W VPS1P21576 704 aaKnown RBP2.57□□□□□ -2
RPN3YER021W ASC1P38011 319 aaKnown RBP2.57□□□□□ -2
RPN3YER021W TAE1P38340 232 aa2.57□□□□□ -2
RPN3YER021W VHS2P40463 436 aa2.57□□□□□ -2
RPN3YER021W BIR1P47134 954 aa2.57□□□□□ -2
RPN3YER021W PRP24P49960 444 aaKnown RBP2.57□□□□□ -2
RPN3YER021W SDT1P53078 280 aa2.57□□□□□ -2
RPN3YER021W RTC4P53850 401 aa2.57□□□□□ -2
RPN3YER021W RHO5P53879 331 aaKnown RBP2.57□□□□□ -2
RPN3YER021W PAL1Q05518 499 aaKnown RBP2.57□□□□□ -2
RPN3YER021W TMC1Q08422 150 aaPredicted RBP2.57□□□□□ -2
RPN3YER021W APC5Q08683 685 aa2.57□□□□□ -2
RPN3YER021W YOR097CQ12274 175 aaPredicted RBP2.57□□□□□ -2
RPN3YER021W DAL81P21657 970 aa2.57□□□□□ -2
RPN3YER021W CTM1P38818 585 aa2.57□□□□□ -2
RPN3YER021W SFH5P47008 294 aa2.57□□□□□ -2
RPN3YER021W COG7P53195 279 aa2.57□□□□□ -2
RPN3YER021W RPN9Q04062 393 aaKnown RBP2.57□□□□□ -2
RPN3YER021W MHR1Q06630 226 aa2.57□□□□□ -2
RPN3YER021W YRM1Q12340 786 aa2.57□□□□□ -2
RPN3YER021W MDH1P17505 334 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
RPN3YER021W RVS161P25343 265 aaKnown RBP2.56□□□□□ -2
RPN3YER021W POP5P28005 173 aa2.56□□□□□ -2
RPN3YER021W SWI3P32591 825 aa2.56□□□□□ -2
RPN3YER021W SPR1P32603 445 aa2.56□□□□□ -2
RPN3YER021W TAF14P35189 244 aa2.56□□□□□ -2
RPN3YER021W GAT2P40209 560 aa2.56□□□□□ -2
RPN3YER021W RSC1P53236 928 aa2.56□□□□□ -2
RPN3YER021W ADD37Q03233 198 aa2.56□□□□□ -2
RPN3YER021W SPG3Q04398 127 aaPredicted RBP2.56□□□□□ -2
RPN3YER021W RRP9Q06506 573 aaKnown RBP2.56□□□□□ -2
RPN3YER021W ABP140Q08641 628 aaKnown RBP2.56□□□□□ -2
RPN3YER021W PER33Q12144 273 aa2.56□□□□□ -2
RPN3YER021W TPT1Q12272 230 aaKnown RBP2.56□□□□□ -2
RPN3YER021W GLE1Q12315 538 aa2.56□□□□□ -2
RPN3YER021W GIS3Q12418 502 aa2.56□□□□□ -2
RPN3YER021W TRA1P38811 3744 aa2.56□□□□□ -2
RPN3YER021W STT4P37297 1900 aa2.55□□□□□ -2
RPN3YER021W HOM3P10869 527 aa2.55□□□□□ -2
RPN3YER021W RRT12P25381 491 aa2.55□□□□□ -2
RPN3YER021W ZTA1P38230 334 aaKnown RBP2.55□□□□□ -2
RPN3YER021W SIM1P40472 476 aa2.55□□□□□ -2
RPN3YER021W TIS11P47977 285 aa2.55□□□□□ -2
RPN3YER021W YGR111WP53265 400 aa2.55□□□□□ -2
RPN3YER021W PRM1P53835 661 aa2.55□□□□□ -2
RPN3YER021W BSC6Q08280 497 aa2.55□□□□□ -2
RPN3YER021W UAF30Q08747 228 aa2.55□□□□□ -2
RPN3YER021W RAX1Q08760 435 aa2.55□□□□□ -2
RPN3YER021W AEP3Q12089 606 aa2.55□□□□□ -2
RPN3YER021W HSP82P02829 709 aaKnown RBP2.54□□□□□ -2
RPN3YER021W YCL068CP25593 260 aa2.54□□□□□ -2
RPN3YER021W CHK1P38147 527 aa2.54□□□□□ -2
RPN3YER021W YJR085CP47131 105 aaKnown RBP2.54□□□□□ -2
RPN3YER021W NBP35P52920 328 aa2.54□□□□□ -2
RPN3YER021W TRM112P53738 135 aaPredicted RBP2.54□□□□□ -2
RPN3YER021W YLR152CP54072 576 aa2.54□□□□□ -2
RPN3YER021W TIM8P57744 87 aa2.54□□□□□ -2
RPN3YER021W EGD1Q02642 157 aaKnown RBP2.54□□□□□ -2
RPN3YER021W STD1Q02794 444 aa2.54□□□□□ -2
RPN3YER021W PEX25Q02969 394 aa2.54□□□□□ -2
RPN3YER021W PIR1Q03178 341 aa2.54□□□□□ -2
RPN3YER021W ATG10Q07879 167 aa2.54□□□□□ -2
RPN3YER021W YLR012CQ07927 99 aa2.54□□□□□ -2
RPN3YER021W PHA2P32452 334 aa2.53□□□□□ -2
RPN3YER021W VMA8P32610 256 aaKnown RBP2.53□□□□□ -2
RPN3YER021W URA8P38627 578 aaPredicted RBP2.53□□□□□ -2
RPN3YER021W SRP72P38688 640 aaKnown RBP2.53□□□□□ -2
RPN3YER021W STP2P38704 541 aa2.53□□□□□ -2
RPN3YER021W SBE22P38814 852 aa2.53□□□□□ -2
RPN3YER021W FAD1P38913 306 aa2.53□□□□□ -2
RPN3YER021W STN1P38960 494 aa2.53□□□□□ -2
RPN3YER021W MDE1P47095 244 aa2.53□□□□□ -2
RPN3YER021W BRO1P48582 844 aa2.53□□□□□ -2
RPN3YER021W NBP1P52919 319 aaPredicted RBP2.53□□□□□ -2
RPN3YER021W EMC4P53073 190 aa2.53□□□□□ -2
RPN3YER021W NUP116Q02630 1113 aa2.53□□□□□ -2
RPN3YER021W MMT1Q03218 510 aa2.53□□□□□ -2
RPN3YER021W CCE1Q03702 353 aa2.53□□□□□ -2
RPN3YER021W RLP24Q07915 199 aaKnown RBP2.53□□□□□ -2
RPN3YER021W YLR046CQ12253 270 aa2.53□□□□□ -2
RPN3YER021W GPM3Q12326 303 aa2.53□□□□□ -2
RPN3YER021W WTM1Q12363 437 aaKnown RBP2.53□□□□□ -2
RPN3YER021W YKR104WP0CE69 306 aa2.53□□□□□ -2.01
RPN3YER021W RIM1P32445 135 aaKnown RBP2.53□□□□□ -2.01
RPN3YER021W CYS4P32582 507 aaKnown RBP2.53□□□□□ -2.01
RPN3YER021W RRP1P35178 278 aaPredicted RBP2.53□□□□□ -2.01
RPN3YER021W LCB2P40970 561 aa2.53□□□□□ -2.01
RPN3YER021W YML6P51998 286 aa2.53□□□□□ -2.01
RPN3YER021W IRC25Q07951 179 aa2.53□□□□□ -2.01
RPN3YER021W SEC16P48415 2195 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms