RNA–Protein interactions for RNA: YDR340W

YDR340W, Transcript of Putative protein of unknown function, yeast

Gene YDR340W, Length 303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR340W	YDR340W	OKP1	P53298	406 aa		3.12	□□□□□ -1.91
YDR340W	YDR340W	YLR281C	Q05863	155 aa		3.12	□□□□□ -1.91
YDR340W	YDR340W	GMC2	Q06201	188 aa		3.12	□□□□□ -1.91
YDR340W	YDR340W	BER1	Q06688	274 aa	Known RBP	3.12	□□□□□ -1.91
YDR340W	YDR340W	MDM36	Q06820	579 aa		3.12	□□□□□ -1.91
YDR340W	YDR340W	SNA4	Q07549	140 aa		3.12	□□□□□ -1.91
YDR340W	YDR340W	THP3	Q12049	470 aa	Known RBP	3.12	□□□□□ -1.91
YDR340W	YDR340W	YCR024C-B	Q3E7Z8	88 aa		3.12	□□□□□ -1.91
YDR340W	YDR340W	PIS1	P06197	220 aa	Known RBP	3.11	□□□□□ -1.91
YDR340W	YDR340W	PRB1	P09232	635 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	YCR043C	P25361	127 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	CWP1	P28319	239 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	PRR1	P28708	518 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	GCG1	P32656	232 aa	Known RBP	3.11	□□□□□ -1.91
YDR340W	YDR340W	ATO2	P32907	282 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
YDR340W	YDR340W	ASK1	P35734	292 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	CUE2	P36075	443 aa	Known RBP	3.11	□□□□□ -1.91
YDR340W	YDR340W	YBP1	P38315	674 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	TDA11	P38854	504 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	PRM9	P39551	298 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	RPH1	P39956	796 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	RTR1	P40084	226 aa	Predicted RBP	3.11	□□□□□ -1.91
YDR340W	YDR340W	SLM1	P40485	686 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	FMC1	P40491	155 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	YIL029C	P40538	142 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	TES1	P41903	349 aa	Known RBP	3.11	□□□□□ -1.91
YDR340W	YDR340W	YGR210C	P42942	411 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	AGP3	P43548	558 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	NCA3	P46955	337 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	LCB3	P47013	409 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	MRM2	P53123	320 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	SCW4	P53334	386 aa	Known RBP	3.11	□□□□□ -1.91
YDR340W	YDR340W	MNT4	P53745	580 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	SED5	Q01590	340 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	NUP116	Q02630	1113 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	IRC4	Q03036	179 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	SRL4	Q03085	281 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	HCR1	Q05775	265 aa	Known RBP	3.11	□□□□□ -1.91
YDR340W	YDR340W	CMS1	Q07897	291 aa	Known RBP	3.11	□□□□□ -1.91
YDR340W	YDR340W	LOT6	Q07923	191 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	ALE1	Q08548	619 aa		3.11	□□□□□ -1.91
YDR340W	YDR340W	COX2	P00410	251 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	RAD3	P06839	778 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	VPS1	P21576	704 aa	Known RBP	3.1	□□□□□ -1.91
YDR340W	YDR340W	VPS3	P23643	1011 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	RNA14	P25298	677 aa	Known RBP	3.1	□□□□□ -1.91
YDR340W	YDR340W	YCR016W	P25617	290 aa	Known RBP	3.1	□□□□□ -1.91
YDR340W	YDR340W	AGA1	P32323	725 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	MEI5	P32489	222 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	KAR9	P32526	644 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	BMH2	P34730	273 aa	Known RBP	3.1	□□□□□ -1.91
YDR340W	YDR340W	YKL071W	P36086	256 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	YER085C	P40058	173 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	SHQ1	P40486	507 aa	Predicted RBP	3.1	□□□□□ -1.91
YDR340W	YDR340W	DFG10	P40526	253 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	YFL067W	P43537	175 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	CTK3	P46963	296 aa	Predicted RBP	3.1	□□□□□ -1.91
YDR340W	YDR340W	WSC2	P53832	503 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	HCH1	P53834	153 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	YMR209C	Q03648	457 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	PRM6	Q04705	352 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	ERP1	Q05359	219 aa	Known RBP	3.1	□□□□□ -1.91
YDR340W	YDR340W	APC9	Q12107	265 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	RGT2	Q12300	763 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	EAF3	Q12432	401 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	PCL9	Q12477	304 aa		3.1	□□□□□ -1.91
YDR340W	YDR340W	ADH2	P00331	348 aa	Known RBP	3.09	□□□□□ -1.91
YDR340W	YDR340W	ARG80	P07249	177 aa		3.09	□□□□□ -1.91
YDR340W	YDR340W	RPL16A	P26784	199 aa	Known RBP	3.09	□□□□□ -1.91
YDR340W	YDR340W	YHR035W	P38769	630 aa		3.09	□□□□□ -1.91
YDR340W	YDR340W	YND1	P40009	630 aa		3.09	□□□□□ -1.91
YDR340W	YDR340W	YNL320W	P42840	284 aa		3.09	□□□□□ -1.91
YDR340W	YDR340W	WWM1	P43582	211 aa	Known RBP	3.09	□□□□□ -1.91
YDR340W	YDR340W	SAD1	P43589	448 aa		3.09	□□□□□ -1.91
YDR340W	YDR340W	LSG1	P53145	640 aa	Known RBP	3.09	□□□□□ -1.91
YDR340W	YDR340W	YMR010W	Q03687	405 aa		3.09	□□□□□ -1.91
YDR340W	YDR340W	ASR1	Q06834	288 aa		3.09	□□□□□ -1.91
YDR340W	YDR340W	SMC5	Q08204	1093 aa		3.09	□□□□□ -1.91
YDR340W	YDR340W	DAP1	Q12091	152 aa		3.09	□□□□□ -1.91
YDR340W	YDR340W	YOR029W	Q12243	111 aa		3.09	□□□□□ -1.91
YDR340W	YDR340W	HTZ1	Q12692	134 aa	Known RBP	3.09	□□□□□ -1.91
YDR340W	YDR340W	ADF1	Q2V2Q1	113 aa		3.09	□□□□□ -1.91
YDR340W	YDR340W	HEM15	P16622	393 aa		3.08	□□□□□ -1.92
YDR340W	YDR340W	MET16	P18408	261 aa	Predicted RBP	3.08	□□□□□ -1.92
YDR340W	YDR340W	KRE6	P32486	720 aa		3.08	□□□□□ -1.92
YDR340W	YDR340W	SRB4	P32569	687 aa		3.08	□□□□□ -1.92
YDR340W	YDR340W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
YDR340W	YDR340W	AVT5	P38176	459 aa		3.08	□□□□□ -1.92
YDR340W	YDR340W	BIG1	P38813	335 aa		3.08	□□□□□ -1.92
YDR340W	YDR340W	AIM10	P39965	576 aa	Known RBP	3.08	□□□□□ -1.92
YDR340W	YDR340W	ALD5	P40047	520 aa	Known RBP	3.08	□□□□□ -1.92
YDR340W	YDR340W	MAM33	P40513	266 aa		3.08	□□□□□ -1.92
YDR340W	YDR340W	MSS2	P40990	351 aa		3.08	□□□□□ -1.92
YDR340W	YDR340W	YAR1	P46683	200 aa		3.08	□□□□□ -1.92
YDR340W	YDR340W	CGR1	P53188	120 aa		3.08	□□□□□ -1.92
YDR340W	YDR340W	TDA1	Q03533	586 aa		3.08	□□□□□ -1.92
YDR340W	YDR340W	DDC1	Q08949	612 aa		3.08	□□□□□ -1.92
YDR340W	YDR340W	FCY22	Q12119	530 aa		3.08	□□□□□ -1.92
YDR340W	YDR340W	POM33	Q12164	279 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms