RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA1YDL185W UTP25P40498 721 aaKnown RBP3.78□□□□□ -1.8
VMA1YDL185W OPT1P40897 799 aa3.78□□□□□ -1.8
VMA1YDL185W SNG1P46950 547 aa3.78□□□□□ -1.8
VMA1YDL185W STE24P47154 453 aa3.78□□□□□ -1.8
VMA1YDL185W YGR012WP53206 393 aa3.78□□□□□ -1.8
VMA1YDL185W TUB4P53378 473 aa3.78□□□□□ -1.8
VMA1YDL185W KTR6P54070 446 aa3.78□□□□□ -1.8
VMA1YDL185W SRP1Q02821 542 aaKnown RBP3.78□□□□□ -1.8
VMA1YDL185W CAC2Q04199 468 aa3.78□□□□□ -1.8
VMA1YDL185W RAD28Q12021 506 aa3.78□□□□□ -1.8
VMA1YDL185W ISU2Q12056 156 aa3.78□□□□□ -1.8
VMA1YDL185W YPL066WQ12194 479 aa3.78□□□□□ -1.8
VMA1YDL185W ARP7Q12406 477 aa3.78□□□□□ -1.8
VMA1YDL185W PMA1P05030 918 aaKnown RBP3.78□□□□□ -1.8
VMA1YDL185W CTT1P06115 562 aa3.78□□□□□ -1.8
VMA1YDL185W GCD1P09032 578 aaPredicted RBP3.78□□□□□ -1.8
VMA1YDL185W RPB3P16370 318 aaKnown RBP3.78□□□□□ -1.8
VMA1YDL185W YPK2P18961 677 aa3.78□□□□□ -1.8
VMA1YDL185W RRP7P25368 297 aaPredicted RBP3.78□□□□□ -1.8
VMA1YDL185W MRPL9P31334 269 aa3.78□□□□□ -1.8
VMA1YDL185W AAR2P32357 355 aaPredicted RBP3.78□□□□□ -1.8
VMA1YDL185W CDC12P32468 407 aaKnown RBP3.78□□□□□ -1.8
VMA1YDL185W TVP38P36164 337 aa3.78□□□□□ -1.8
VMA1YDL185W POL12P38121 705 aaPredicted RBP3.78□□□□□ -1.8
VMA1YDL185W DTR1P38125 572 aa3.78□□□□□ -1.8
VMA1YDL185W MTC4P38335 694 aaKnown RBP3.78□□□□□ -1.8
VMA1YDL185W OCA5P38738 679 aa3.78□□□□□ -1.8
VMA1YDL185W PTH1P38876 190 aaKnown RBP3.78□□□□□ -1.8
VMA1YDL185W RAD55P38953 406 aa3.78□□□□□ -1.8
VMA1YDL185W PFD1P46988 109 aa3.78□□□□□ -1.8
VMA1YDL185W YJR111CP47148 283 aaKnown RBP3.78□□□□□ -1.8
VMA1YDL185W DAN1P47178 298 aa3.78□□□□□ -1.8
VMA1YDL185W SIW14P53965 281 aa3.78□□□□□ -1.8
VMA1YDL185W YPL062WQ02781 134 aa3.78□□□□□ -1.8
VMA1YDL185W MRI1Q06489 411 aaKnown RBP3.78□□□□□ -1.8
VMA1YDL185W NDE2Q07500 545 aa3.78□□□□□ -1.8
VMA1YDL185W PML1Q07930 204 aaPredicted RBP3.78□□□□□ -1.8
VMA1YDL185W YTM1Q12024 460 aaPredicted RBP3.78□□□□□ -1.8
VMA1YDL185W ATX2Q12067 313 aa3.78□□□□□ -1.8
VMA1YDL185W AFI1Q99222 893 aa3.78□□□□□ -1.8
VMA1YDL185W PUT1P09368 476 aa3.78□□□□□ -1.81
VMA1YDL185W DCC1P25559 380 aa3.78□□□□□ -1.81
VMA1YDL185W CDC50P25656 391 aa3.78□□□□□ -1.81
VMA1YDL185W YIM1P28625 365 aa3.78□□□□□ -1.81
VMA1YDL185W SUA5P32579 426 aa3.78□□□□□ -1.81
VMA1YDL185W SSS1P35179 80 aa3.78□□□□□ -1.81
VMA1YDL185W PAN6P40459 309 aa3.78□□□□□ -1.81
VMA1YDL185W AIM25P47140 327 aa3.78□□□□□ -1.81
VMA1YDL185W RPS7BP48164 190 aaKnown RBP3.78□□□□□ -1.81
VMA1YDL185W TOM22P49334 152 aa3.78□□□□□ -1.81
VMA1YDL185W ARG5,6Q01217 863 aa3.78□□□□□ -1.81
VMA1YDL185W SPR28Q04921 423 aa3.78□□□□□ -1.81
VMA1YDL185W DCR2Q05924 578 aa3.78□□□□□ -1.81
VMA1YDL185W YPD1Q07688 167 aa3.78□□□□□ -1.81
VMA1YDL185W RPN5Q12250 445 aaKnown RBP3.78□□□□□ -1.81
VMA1YDL185W YLR046CQ12253 270 aa3.78□□□□□ -1.81
VMA1YDL185W ICT1Q12385 394 aa3.78□□□□□ -1.81
VMA1YDL185W NAM2P11325 894 aa3.77□□□□□ -1.81
VMA1YDL185W ERD1P16151 362 aa3.77□□□□□ -1.81
VMA1YDL185W MRPL8P22353 238 aa3.77□□□□□ -1.81
VMA1YDL185W PRE7P23724 241 aaKnown RBP3.77□□□□□ -1.81
VMA1YDL185W YIH1P25637 258 aa3.77□□□□□ -1.81
VMA1YDL185W YBR063CP38083 404 aa3.77□□□□□ -1.81
VMA1YDL185W RTC3P38804 111 aaPredicted RBP3.77□□□□□ -1.81
VMA1YDL185W SWM2P40342 146 aa3.77□□□□□ -1.81
VMA1YDL185W IME4P41833 600 aa3.77□□□□□ -1.81
VMA1YDL185W PFS2P42841 465 aaKnown RBP3.77□□□□□ -1.81
VMA1YDL185W AGX1P43567 385 aa3.77□□□□□ -1.81
VMA1YDL185W YHC3P47040 408 aa3.77□□□□□ -1.81
VMA1YDL185W KXD1P53158 218 aa3.77□□□□□ -1.81
VMA1YDL185W PEX31P53203 462 aa3.77□□□□□ -1.81
VMA1YDL185W YNL034WP53963 612 aa3.77□□□□□ -1.81
VMA1YDL185W HRD3Q05787 833 aa3.77□□□□□ -1.81
VMA1YDL185W TMS1Q12116 473 aa3.77□□□□□ -1.81
VMA1YDL185W TIR4Q12218 487 aaPredicted RBP3.77□□□□□ -1.81
VMA1YDL185W TY1A-NL1Q12391 440 aaKnown RBP3.77□□□□□ -1.81
VMA1YDL185W HOM3P10869 527 aa3.77□□□□□ -1.81
VMA1YDL185W SIR1P21691 654 aa3.77□□□□□ -1.81
VMA1YDL185W RER1P25560 188 aa3.77□□□□□ -1.81
VMA1YDL185W ARE1P25628 610 aa3.77□□□□□ -1.81
VMA1YDL185W FUN26P31381 517 aa3.77□□□□□ -1.81
VMA1YDL185W SUI1P32911 108 aaKnown RBP3.77□□□□□ -1.81
VMA1YDL185W MSN4P33749 630 aa3.77□□□□□ -1.81
VMA1YDL185W MCR1P36060 302 aaKnown RBP3.77□□□□□ -1.81
VMA1YDL185W YHR035WP38769 630 aa3.77□□□□□ -1.81
VMA1YDL185W DHH1P39517 506 aaKnown RBP3.77□□□□□ -1.81
VMA1YDL185W GCV3P39726 170 aaPredicted RBP3.77□□□□□ -1.81
VMA1YDL185W RGI2P40188 164 aa3.77□□□□□ -1.81
VMA1YDL185W SNM1P40993 198 aa3.77□□□□□ -1.81
VMA1YDL185W RMD8P43620 662 aa3.77□□□□□ -1.81
VMA1YDL185W NIT2P47016 307 aa3.77□□□□□ -1.81
VMA1YDL185W GPG1P53130 126 aa3.77□□□□□ -1.81
VMA1YDL185W DUS1P53759 423 aaKnown RBP3.77□□□□□ -1.81
VMA1YDL185W FMP41P53889 259 aaKnown RBP3.77□□□□□ -1.81
VMA1YDL185W LRS4Q04087 347 aaKnown RBP3.77□□□□□ -1.81
VMA1YDL185W RRP45Q05636 305 aaKnown RBP3.77□□□□□ -1.81
VMA1YDL185W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
VMA1YDL185W RDI1Q12434 202 aa3.77□□□□□ -1.81
VMA1YDL185W Q0010Q9ZZX9 128 aa3.77□□□□□ -1.81
VMA1YDL185W PRB1P09232 635 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 81.5 ms