RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W LTV1P34078 463 aa0.66□□□□□ -2.3
SEC8YPR055W PAC11P40960 533 aa0.66□□□□□ -2.3
SEC8YPR055W PFS2P42841 465 aaKnown RBP0.66□□□□□ -2.3
SEC8YPR055W MRX11Q03079 207 aa0.66□□□□□ -2.3
SEC8YPR055W NSE1Q07913 336 aa0.66□□□□□ -2.3
SEC8YPR055W RAX2Q12465 1220 aa0.66□□□□□ -2.3
SEC8YPR055W YOR338WQ99326 363 aa0.66□□□□□ -2.3
SEC8YPR055W CHC1P22137 1653 aaKnown RBP0.66□□□□□ -2.3
SEC8YPR055W MMS22Q06164 1454 aa0.66□□□□□ -2.3
SEC8YPR055W RNA1P11745 407 aaKnown RBP0.65□□□□□ -2.3
SEC8YPR055W GIT1P25346 518 aa0.65□□□□□ -2.3
SEC8YPR055W ECT1P33412 323 aa0.65□□□□□ -2.3
SEC8YPR055W STB1P42845 420 aa0.65□□□□□ -2.3
SEC8YPR055W YFL012WP43580 148 aa0.65□□□□□ -2.3
SEC8YPR055W RTT102P53330 157 aa0.65□□□□□ -2.3
SEC8YPR055W FSH2Q05015 223 aa0.65□□□□□ -2.3
SEC8YPR055W YDL114WQ07530 308 aa0.65□□□□□ -2.3
SEC8YPR055W ATP16Q12165 160 aa0.65□□□□□ -2.3
SEC8YPR055W YPS3Q12303 508 aa0.65□□□□□ -2.3
SEC8YPR055W YOR093CQ12275 1648 aa0.65□□□□□ -2.31
SEC8YPR055W HSL1P34244 1518 aa0.65□□□□□ -2.31
SEC8YPR055W RPL23AP0CX41 137 aaKnown RBP0.65□□□□□ -2.31
SEC8YPR055W RPL23BP0CX42 137 aaKnown RBP0.65□□□□□ -2.31
SEC8YPR055W PXA2P34230 853 aa0.65□□□□□ -2.31
SEC8YPR055W DTR1P38125 572 aa0.65□□□□□ -2.31
SEC8YPR055W MLH1P38920 769 aa0.65□□□□□ -2.31
SEC8YPR055W RMI1Q02685 241 aa0.65□□□□□ -2.31
SEC8YPR055W YDR541CQ03049 344 aa0.65□□□□□ -2.31
SEC8YPR055W YOL029CQ08187 201 aa0.65□□□□□ -2.31
SEC8YPR055W SLF1Q12034 447 aaKnown RBP0.65□□□□□ -2.31
SEC8YPR055W YDL109CQ12103 647 aa0.65□□□□□ -2.31
SEC8YPR055W SCH9P11792 824 aaKnown RBP0.65□□□□□ -2.31
SEC8YPR055W MAS2P11914 482 aa0.65□□□□□ -2.31
SEC8YPR055W DBR1P24309 405 aaKnown RBP0.65□□□□□ -2.31
SEC8YPR055W RPL16AP26784 199 aaKnown RBP0.65□□□□□ -2.31
SEC8YPR055W DPH2P32461 534 aa0.65□□□□□ -2.31
SEC8YPR055W RRT13P40042 185 aa0.65□□□□□ -2.31
SEC8YPR055W YJR030CP47101 745 aa0.65□□□□□ -2.31
SEC8YPR055W CIK1Q01649 594 aa0.65□□□□□ -2.31
SEC8YPR055W SMP3Q04174 516 aa0.65□□□□□ -2.31
SEC8YPR055W AIM33Q04516 312 aa0.65□□□□□ -2.31
SEC8YPR055W PIN3Q06449 215 aa0.65□□□□□ -2.31
SEC8YPR055W YAL067W-AQ8TGK6 75 aa0.65□□□□□ -2.31
SEC8YPR055W ESP1Q03018 1630 aa0.65□□□□□ -2.31
SEC8YPR055W RPA190P10964 1664 aaKnown RBP0.64□□□□□ -2.31
SEC8YPR055W RPO21P04050 1733 aaKnown RBP0.64□□□□□ -2.31
SEC8YPR055W DEP1P31385 405 aa0.64□□□□□ -2.31
SEC8YPR055W FMT1P32785 401 aa0.64□□□□□ -2.31
SEC8YPR055W ATG7P38862 630 aa0.64□□□□□ -2.31
SEC8YPR055W CHL4P38907 458 aa0.64□□□□□ -2.31
SEC8YPR055W YPL107WQ02873 248 aa0.64□□□□□ -2.31
SEC8YPR055W YPR195CQ06594 109 aa0.64□□□□□ -2.31
SEC8YPR055W IPK1Q06667 281 aa0.64□□□□□ -2.31
SEC8YPR055W YOL075CQ08234 1294 aa0.64□□□□□ -2.31
SEC8YPR055W RUP1Q12242 671 aa0.64□□□□□ -2.31
SEC8YPR055W HMS1Q12398 434 aa0.64□□□□□ -2.31
SEC8YPR055W PDR15Q04182 1529 aaKnown RBP0.64□□□□□ -2.31
SEC8YPR055W HEM4P06174 275 aa0.64□□□□□ -2.31
SEC8YPR055W RPS19AP07280 144 aaKnown RBP0.64□□□□□ -2.31
SEC8YPR055W RPS19BP07281 144 aaPredicted RBP0.64□□□□□ -2.31
SEC8YPR055W ASP3-2P0CX77 362 aa0.64□□□□□ -2.31
SEC8YPR055W ASP3-3P0CX78 362 aa0.64□□□□□ -2.31
SEC8YPR055W ASP3-4P0CX79 362 aa0.64□□□□□ -2.31
SEC8YPR055W ASP3-1P0CZ17 362 aa0.64□□□□□ -2.31
SEC8YPR055W DBP7P36120 742 aaKnown RBP0.64□□□□□ -2.31
SEC8YPR055W PEX22P39718 180 aa0.64□□□□□ -2.31
SEC8YPR055W GDI1P39958 451 aaKnown RBP0.64□□□□□ -2.31
SEC8YPR055W SNL1P40548 159 aa0.64□□□□□ -2.31
SEC8YPR055W EPL1P43572 832 aa0.64□□□□□ -2.31
SEC8YPR055W BUD27P43573 796 aaKnown RBP RIP-Chip data0.64□□□□□ -2.31not detected
SEC8YPR055W YJR054WP47114 497 aa0.64□□□□□ -2.31
SEC8YPR055W ASN2P49090 572 aaKnown RBP0.64□□□□□ -2.31
SEC8YPR055W RNH201P53942 307 aa0.64□□□□□ -2.31
SEC8YPR055W YOL085CQ99345 113 aa0.64□□□□□ -2.31
SEC8YPR055W CDC25P04821 1589 aa0.64□□□□□ -2.31
SEC8YPR055W RPS16AP0CX51 143 aaKnown RBP0.63□□□□□ -2.31
SEC8YPR055W RPS16BP0CX52 143 aaKnown RBP0.63□□□□□ -2.31
SEC8YPR055W UNG1P12887 359 aa0.63□□□□□ -2.31
SEC8YPR055W BMT2P38278 337 aa0.63□□□□□ -2.31
SEC8YPR055W PRP3Q03338 469 aaPredicted RBP0.63□□□□□ -2.31
SEC8YPR055W YMR244WQ04018 355 aa0.63□□□□□ -2.31
SEC8YPR055W GAS2Q06135 555 aa0.63□□□□□ -2.31
SEC8YPR055W NDL1Q06568 189 aa0.63□□□□□ -2.31
SEC8YPR055W NOP6Q07623 225 aaKnown RBP0.63□□□□□ -2.31
SEC8YPR055W SHS1Q07657 551 aa0.63□□□□□ -2.31
SEC8YPR055W AAD15Q08361 143 aa0.63□□□□□ -2.31
SEC8YPR055W PEX27Q08580 376 aa0.63□□□□□ -2.31
SEC8YPR055W SLM3Q12093 417 aa0.63□□□□□ -2.31
SEC8YPR055W YDL211CQ12121 372 aa0.63□□□□□ -2.31
SEC8YPR055W MEX67Q99257 599 aaKnown RBP0.63□□□□□ -2.31
SEC8YPR055W GSC2P40989 1895 aa0.63□□□□□ -2.31
SEC8YPR055W ARO1P08566 1588 aaKnown RBP0.63□□□□□ -2.31
SEC8YPR055W DAP2P18962 818 aa0.63□□□□□ -2.31
SEC8YPR055W EPT1P22140 391 aa0.63□□□□□ -2.31
SEC8YPR055W MIR1P23641 311 aaKnown RBP0.63□□□□□ -2.31
SEC8YPR055W PSO2P30620 661 aa0.63□□□□□ -2.31
SEC8YPR055W SSE1P32589 693 aaKnown RBP0.63□□□□□ -2.31
SEC8YPR055W MDL1P33310 695 aa0.63□□□□□ -2.31
SEC8YPR055W YSW1P38280 609 aa0.63□□□□□ -2.31
SEC8YPR055W YPT35P38815 214 aaKnown RBP0.63□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms