RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C RKM5Q12367 367 aa3.25□□□□□ -1.89
RPA43YOR340C TEF1P02994 458 aaKnown RBP3.24□□□□□ -1.89
RPA43YOR340C YML002WP0CF17 737 aa3.24□□□□□ -1.89
RPA43YOR340C IMA3P0CW40 589 aa3.24□□□□□ -1.89
RPA43YOR340C IMA4P0CW41 589 aa3.24□□□□□ -1.89
RPA43YOR340C GLK1P17709 500 aaKnown RBP3.24□□□□□ -1.89
RPA43YOR340C DCC1P25559 380 aa3.24□□□□□ -1.89
RPA43YOR340C MGT1P26188 188 aa3.24□□□□□ -1.89
RPA43YOR340C AEP1P32493 518 aa3.24□□□□□ -1.89
RPA43YOR340C REC114P32841 428 aa3.24□□□□□ -1.89
RPA43YOR340C ECM15P35195 104 aa3.24□□□□□ -1.89
RPA43YOR340C BZZ1P38822 633 aa3.24□□□□□ -1.89
RPA43YOR340C SEO1P39709 593 aa3.24□□□□□ -1.89
RPA43YOR340C YPS6P40583 537 aa3.24□□□□□ -1.89
RPA43YOR340C AZF1P41696 914 aa3.24□□□□□ -1.89
RPA43YOR340C RPS0BP46654 252 aaKnown RBP3.24□□□□□ -1.89
RPA43YOR340C RPC17P47076 161 aa3.24□□□□□ -1.89
RPA43YOR340C ECM27P47144 725 aa3.24□□□□□ -1.89
RPA43YOR340C OCA2P53949 197 aa3.24□□□□□ -1.89
RPA43YOR340C CDC14Q00684 551 aa3.24□□□□□ -1.89
RPA43YOR340C UTP6Q02354 440 aaKnown RBP3.24□□□□□ -1.89
RPA43YOR340C YMR087WQ04299 284 aa3.24□□□□□ -1.89
RPA43YOR340C VTI1Q04338 217 aa3.24□□□□□ -1.89
RPA43YOR340C IMA2Q08295 589 aa3.24□□□□□ -1.89
RPA43YOR340C DCI1Q08558 271 aa3.24□□□□□ -1.89
RPA43YOR340C UAF30Q08747 228 aa3.24□□□□□ -1.89
RPA43YOR340C LDB17Q12342 491 aa3.24□□□□□ -1.89
RPA43YOR340C RAD1P06777 1100 aa3.23□□□□□ -1.89
RPA43YOR340C AMD1P15274 810 aaKnown RBP3.23□□□□□ -1.89
RPA43YOR340C HSP26P15992 214 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
RPA43YOR340C HNM1P19807 563 aa3.23□□□□□ -1.89
RPA43YOR340C FUN19P28003 413 aaPredicted RBP3.23□□□□□ -1.89
RPA43YOR340C SIN4P32259 974 aa3.23□□□□□ -1.89
RPA43YOR340C ERG1P32476 496 aaKnown RBP3.23□□□□□ -1.89
RPA43YOR340C PRP21P32524 280 aaPredicted RBP3.23□□□□□ -1.89
RPA43YOR340C TRS65P32893 560 aa3.23□□□□□ -1.89
RPA43YOR340C VPS17P32913 551 aa3.23□□□□□ -1.89
RPA43YOR340C POP4P38336 279 aa3.23□□□□□ -1.89
RPA43YOR340C SMF2P38778 549 aa3.23□□□□□ -1.89
RPA43YOR340C CCT2P39076 527 aaKnown RBP3.23□□□□□ -1.89
RPA43YOR340C VPS52P39904 641 aa3.23□□□□□ -1.89
RPA43YOR340C SCC4P40090 624 aa3.23□□□□□ -1.89
RPA43YOR340C COQ5P49017 307 aa3.23□□□□□ -1.89
RPA43YOR340C TOM22P49334 152 aa3.23□□□□□ -1.89
RPA43YOR340C NUP84P52891 726 aa3.23□□□□□ -1.89
RPA43YOR340C YGR016WP53209 190 aa3.23□□□□□ -1.89
RPA43YOR340C MDM30Q05930 598 aa3.23□□□□□ -1.89
RPA43YOR340C LDB18Q07887 179 aa3.23□□□□□ -1.89
RPA43YOR340C SMF3Q12078 473 aaPredicted RBP3.23□□□□□ -1.89
RPA43YOR340C MED2Q12124 431 aa3.23□□□□□ -1.89
RPA43YOR340C HSP42Q12329 375 aa3.23□□□□□ -1.89
RPA43YOR340C YOR338WQ99326 363 aa3.23□□□□□ -1.89
RPA43YOR340C BRR2P32639 2163 aaKnown RBP3.22□□□□□ -1.89
RPA43YOR340C QCR6P00127 147 aa3.22□□□□□ -1.89
RPA43YOR340C LEU4P06208 619 aaKnown RBP3.22□□□□□ -1.89
RPA43YOR340C CMD1P06787 147 aaKnown RBP3.22□□□□□ -1.89
RPA43YOR340C HEM15P16622 393 aa3.22□□□□□ -1.89
RPA43YOR340C SPO7P18410 259 aa3.22□□□□□ -1.89
RPA43YOR340C SEC62P21825 274 aa3.22□□□□□ -1.89
RPA43YOR340C RHB1P25378 209 aa3.22□□□□□ -1.89
RPA43YOR340C SMI1P32566 505 aa3.22□□□□□ -1.89
RPA43YOR340C CSE1P33307 960 aa3.22□□□□□ -1.89
RPA43YOR340C FAD1P38913 306 aa3.22□□□□□ -1.89
RPA43YOR340C FAU1P40099 211 aa3.22□□□□□ -1.89
RPA43YOR340C CTK3P46963 296 aaPredicted RBP3.22□□□□□ -1.89
RPA43YOR340C CIS3P47001 227 aa3.22□□□□□ -1.89
RPA43YOR340C YNL143CP53908 130 aa3.22□□□□□ -1.89
RPA43YOR340C YPL113CQ02961 396 aa3.22□□□□□ -1.89
RPA43YOR340C RLI1Q03195 608 aaKnown RBP3.22□□□□□ -1.89
RPA43YOR340C RRB1Q04225 511 aaKnown RBP3.22□□□□□ -1.89
RPA43YOR340C RKM1Q08961 583 aaPredicted RBP3.22□□□□□ -1.89
RPA43YOR340C AEP3Q12089 606 aa3.22□□□□□ -1.89
RPA43YOR340C MTR10Q99189 972 aa3.22□□□□□ -1.89
RPA43YOR340C RPL1AP0CX43 217 aaKnown RBP3.21□□□□□ -1.9
RPA43YOR340C RPL1BP0CX44 217 aaKnown RBP3.21□□□□□ -1.9
RPA43YOR340C UBA1P22515 1024 aaKnown RBP3.21□□□□□ -1.9
RPA43YOR340C YCL068CP25593 260 aa3.21□□□□□ -1.9
RPA43YOR340C YCR099CP25657 155 aa3.21□□□□□ -1.9
RPA43YOR340C BUB3P26449 341 aa3.21□□□□□ -1.9
RPA43YOR340C RPN2P32565 945 aaKnown RBP3.21□□□□□ -1.9
RPA43YOR340C SPS19P32573 292 aaKnown RBP3.21□□□□□ -1.9
RPA43YOR340C NRP1P32770 719 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
RPA43YOR340C IMP3P32899 183 aaPredicted RBP3.21□□□□□ -1.9
RPA43YOR340C SOR1P35497 357 aaKnown RBP3.21□□□□□ -1.9
RPA43YOR340C LAS1P36146 502 aaPredicted RBP3.21□□□□□ -1.9
RPA43YOR340C IML3P38265 245 aa3.21□□□□□ -1.9
RPA43YOR340C RFC3P38629 340 aa3.21□□□□□ -1.9
RPA43YOR340C RRP3P38712 501 aaKnown RBP3.21□□□□□ -1.9
RPA43YOR340C YHI9P38765 294 aa3.21□□□□□ -1.9
RPA43YOR340C YPT35P38815 214 aaKnown RBP3.21□□□□□ -1.9
RPA43YOR340C CCT4P39078 528 aaKnown RBP3.21□□□□□ -1.9
RPA43YOR340C RPH1P39956 796 aa3.21□□□□□ -1.9
RPA43YOR340C YND1P40009 630 aa3.21□□□□□ -1.9
RPA43YOR340C YJL070CP40361 888 aa3.21□□□□□ -1.9
RPA43YOR340C VHS2P40463 436 aa3.21□□□□□ -1.9
RPA43YOR340C SAS2P40963 338 aa3.21□□□□□ -1.9
RPA43YOR340C MEP2P41948 499 aa3.21□□□□□ -1.9
RPA43YOR340C SWC4P53201 476 aa3.21□□□□□ -1.9
RPA43YOR340C DSL1P53847 754 aa3.21□□□□□ -1.9
RPA43YOR340C SWS2P53937 143 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms