RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	YDR248C	Q03786	193 aa		3.19	□□□□□ -1.9
VAM10	YOR068C	YMR160W	Q03823	816 aa		3.19	□□□□□ -1.9
VAM10	YOR068C	CAC2	Q04199	468 aa		3.19	□□□□□ -1.9
VAM10	YOR068C	FAR8	Q05040	523 aa		3.19	□□□□□ -1.9
VAM10	YOR068C	YPR127W	Q06494	345 aa		3.19	□□□□□ -1.9
VAM10	YOR068C	RAX1	Q08760	435 aa		3.19	□□□□□ -1.9
VAM10	YOR068C	MED2	Q12124	431 aa		3.19	□□□□□ -1.9
VAM10	YOR068C	ATP16	Q12165	160 aa		3.19	□□□□□ -1.9
VAM10	YOR068C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
VAM10	YOR068C	YDR262W	Q12331	272 aa		3.19	□□□□□ -1.9
VAM10	YOR068C	RAV1	P47104	1357 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	KIN28	P06242	306 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	MAS1	P10507	462 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	SCH9	P11792	824 aa	Known RBP	3.18	□□□□□ -1.9
VAM10	YOR068C	SAG1	P20840	650 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	AIM17	P23180	465 aa	Known RBP	3.18	□□□□□ -1.9
VAM10	YOR068C	CHA1	P25379	360 aa	Known RBP	3.18	□□□□□ -1.9
VAM10	YOR068C	RML2	P32611	393 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	REC114	P32841	428 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	IMP3	P32899	183 aa	Predicted RBP	3.18	□□□□□ -1.9
VAM10	YOR068C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
VAM10	YOR068C	RPC25	P35718	212 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	DRE2	P36152	348 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	YBR139W	P38109	508 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	MMS21	P38632	267 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	ARP1	P38696	384 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	RRP3	P38712	501 aa	Known RBP	3.18	□□□□□ -1.9
VAM10	YOR068C	TRM5	P38793	499 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	CCT2	P39076	527 aa	Known RBP	3.18	□□□□□ -1.9
VAM10	YOR068C	YER186C	P40101	306 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	RTS2	P40962	232 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	GAT1	P43574	510 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	TOS3	P43637	560 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	SNG1	P46950	547 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	YJL118W	P47022	219 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	VPS25	P47142	202 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	COS5	P47187	383 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	GET1	P53192	235 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	DBP6	P53734	629 aa	Known RBP	3.18	□□□□□ -1.9
VAM10	YOR068C	SNX41	Q04053	625 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	YMR130W	Q04223	302 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	RPC11	Q04307	110 aa	Predicted RBP	3.18	□□□□□ -1.9
VAM10	YOR068C	SMA2	Q04658	369 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	YPR091C	Q06833	770 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	COS7	Q07788	383 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	THP1	Q08231	455 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	CSM4	Q08955	156 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	YLR053C	Q12026	108 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	VAM3	Q12241	283 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	HMS1	Q12398	434 aa		3.18	□□□□□ -1.9
VAM10	YOR068C	RPO41	P13433	1351 aa	Known RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	STH1	P32597	1359 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	CDC8	P00572	216 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	ATP6	P00854	259 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	RPS24A	P0CX31	135 aa	Known RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	RPS24B	P0CX32	135 aa	Known RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	RPS16A	P0CX51	143 aa	Known RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	RPS16B	P0CX52	143 aa	Known RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	RPL4A	P10664	362 aa	Known RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	SNF3	P10870	884 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	CLN3	P13365	580 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	MET16	P18408	261 aa	Predicted RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	BUD23	P25627	275 aa	Predicted RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	YUR1	P26725	428 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
VAM10	YOR068C	RAD23	P32628	398 aa	Known RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	RAD5	P32849	1169 aa	Predicted RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	ECT1	P33412	323 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	CBT1	P36038	271 aa	Predicted RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	MRPL17	P36528	281 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	CBP4	P37267	147 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	RIB1	P38066	345 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	THI2	P38141	450 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	LDB7	P38210	180 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	URA8	P38627	578 aa	Predicted RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	LEU5	P38702	357 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	YHI9	P38765	294 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	YHR210C	P38893	341 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	MBB1	P39534	108 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	YER121W	P40076	114 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	POG1	P40473	351 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	YKE4	P40544	346 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	HXT9	P40885	567 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	PRM10	P42946	383 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	ATG27	P46989	271 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	LYS20	P48570	428 aa	Known RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	RPL4B	P49626	362 aa	Known RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	PKP2	P53170	491 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	YIP3	P53633	176 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	SMM1	P53720	384 aa	Known RBP	3.17	□□□□□ -1.9
VAM10	YOR068C	HXT11	P54862	567 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	SHR3	Q02774	210 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	ACL4	Q03771	387 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	COQ9	Q05779	260 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	STE23	Q06010	1027 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	MRPL35	Q06678	367 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	MFG1	Q07684	458 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	RFU1	Q08003	200 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	GRE1	Q08969	168 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	SLF1	Q12034	447 aa	Known RBP	3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms