RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeastyeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSA2YKR077W FSH3Q99369 266 aa3.95□□□□□ -1.78
MSA2YKR077W CBP6P07253 162 aaPredicted RBP3.94□□□□□ -1.78
MSA2YKR077W LDS1P31379 325 aa3.94□□□□□ -1.78
MSA2YKR077W SWI3P32591 825 aa3.94□□□□□ -1.78
MSA2YKR077W ANP1P32629 500 aa3.94□□□□□ -1.78
MSA2YKR077W LAS1P36146 502 aaPredicted RBP3.94□□□□□ -1.78
MSA2YKR077W BMT2P38278 337 aa3.94□□□□□ -1.78
MSA2YKR077W WSC4P38739 605 aa3.94□□□□□ -1.78
MSA2YKR077W RPA34P47006 233 aaPredicted RBP3.94□□□□□ -1.78
MSA2YKR077W YGL262WP53054 175 aa3.94□□□□□ -1.78
MSA2YKR077W VHT1P53241 593 aa3.94□□□□□ -1.78
MSA2YKR077W TPS1Q00764 495 aaKnown RBP3.94□□□□□ -1.78
MSA2YKR077W FSH2Q05015 223 aa3.94□□□□□ -1.78
MSA2YKR077W NFI1Q12216 726 aa3.94□□□□□ -1.78
MSA2YKR077W RPL23AP0CX41 137 aaKnown RBP3.93□□□□□ -1.78
MSA2YKR077W RPL23BP0CX42 137 aaKnown RBP3.93□□□□□ -1.78
MSA2YKR077W RDS1P25611 832 aa3.93□□□□□ -1.78
MSA2YKR077W MRPS9P38120 278 aa3.93□□□□□ -1.78
MSA2YKR077W YLR177WQ06251 628 aa3.93□□□□□ -1.78
MSA2YKR077W DET1Q99288 334 aaKnown RBP3.93□□□□□ -1.78
MSA2YKR077W ADH1P00330 348 aaKnown RBP3.92□□□□□ -1.78
MSA2YKR077W RPS16AP0CX51 143 aaKnown RBP3.92□□□□□ -1.78
MSA2YKR077W RPS16BP0CX52 143 aaKnown RBP3.92□□□□□ -1.78
MSA2YKR077W MAS1P10507 462 aa3.92□□□□□ -1.78
MSA2YKR077W THR4P16120 514 aaKnown RBP3.92□□□□□ -1.78
MSA2YKR077W YKR015CP36111 568 aa3.92□□□□□ -1.78
MSA2YKR077W MRPL27P36526 146 aaPredicted RBP3.92□□□□□ -1.78
MSA2YKR077W SEH1P53011 349 aaKnown RBP3.92□□□□□ -1.78
MSA2YKR077W YGR018CP53211 109 aa3.92□□□□□ -1.78
MSA2YKR077W DBP9Q06218 594 aaKnown RBP3.92□□□□□ -1.78
MSA2YKR077W MCH1Q07376 486 aa3.92□□□□□ -1.78
MSA2YKR077W ATP16Q12165 160 aa3.92□□□□□ -1.78
MSA2YKR077W HIF1Q12373 385 aa3.92□□□□□ -1.78
MSA2YKR077W AIM45Q12480 344 aaKnown RBP3.92□□□□□ -1.78
MSA2YKR077W GRR1P24814 1151 aa3.91□□□□□ -1.78
MSA2YKR077W YJR030CP47101 745 aa3.91□□□□□ -1.78
MSA2YKR077W YNL143CP53908 130 aa3.91□□□□□ -1.78
MSA2YKR077W SMP3Q04174 516 aa3.91□□□□□ -1.78
MSA2YKR077W YMR310CQ04867 317 aaPredicted RBP3.91□□□□□ -1.78
MSA2YKR077W YOL075CQ08234 1294 aa3.91□□□□□ -1.78
MSA2YKR077W YPQ1Q12010 308 aa3.91□□□□□ -1.78
MSA2YKR077W NBL1Q3E7Y6 73 aa3.91□□□□□ -1.78
MSA2YKR077W UNG1P12887 359 aa3.9□□□□□ -1.79
MSA2YKR077W FAR1P21268 830 aa3.9□□□□□ -1.79
MSA2YKR077W POT1P27796 417 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
MSA2YKR077W HMX1P32339 317 aa3.9□□□□□ -1.79
MSA2YKR077W VPH1P32563 840 aaKnown RBP3.9□□□□□ -1.79
MSA2YKR077W TOA1P32773 286 aa3.9□□□□□ -1.79
MSA2YKR077W PTK1P36002 662 aaPredicted RBP3.9□□□□□ -1.79
MSA2YKR077W PEX22P39718 180 aa3.9□□□□□ -1.79
MSA2YKR077W ECM11Q04110 302 aa3.9□□□□□ -1.79
MSA2YKR077W YDR115WQ04598 105 aa3.9□□□□□ -1.79
MSA2YKR077W GLE1Q12315 538 aa3.9□□□□□ -1.79
MSA2YKR077W YOR012WQ12351 137 aa3.9□□□□□ -1.79
MSA2YKR077W YDL012CQ12489 107 aa3.9□□□□□ -1.79
MSA2YKR077W YBL111CQ3E7Y5 667 aa3.9□□□□□ -1.79
MSA2YKR077W MIR1P23641 311 aaKnown RBP3.89□□□□□ -1.79
MSA2YKR077W ECT1P33412 323 aa3.89□□□□□ -1.79
MSA2YKR077W COS9P36034 407 aa3.89□□□□□ -1.79
MSA2YKR077W SIF2P38262 535 aa3.89□□□□□ -1.79
MSA2YKR077W YPT35P38815 214 aaKnown RBP3.89□□□□□ -1.79
MSA2YKR077W LST7P53237 242 aa3.89□□□□□ -1.79
MSA2YKR077W UBA3Q99344 299 aa3.89□□□□□ -1.79
MSA2YKR077W CKI1P20485 582 aa3.88□□□□□ -1.79
MSA2YKR077W YBR241CP38142 488 aa3.88□□□□□ -1.79
MSA2YKR077W BIO3P50277 480 aa3.88□□□□□ -1.79
MSA2YKR077W AQR1P53943 586 aa3.88□□□□□ -1.79
MSA2YKR077W RPL21AQ02753 160 aaKnown RBP3.88□□□□□ -1.79
MSA2YKR077W GAS2Q06135 555 aa3.88□□□□□ -1.79
MSA2YKR077W YOR376WQ08900 122 aa3.88□□□□□ -1.79
MSA2YKR077W LDB17Q12342 491 aa3.88□□□□□ -1.79
MSA2YKR077W RPL21BQ12672 160 aaKnown RBP3.88□□□□□ -1.79
MSA2YKR077W SPT7P35177 1332 aa3.88□□□□□ -1.79
MSA2YKR077W STE3P06783 470 aa3.87□□□□□ -1.79
MSA2YKR077W ASP3-2P0CX77 362 aa3.87□□□□□ -1.79
MSA2YKR077W ASP3-3P0CX78 362 aa3.87□□□□□ -1.79
MSA2YKR077W ASP3-4P0CX79 362 aa3.87□□□□□ -1.79
MSA2YKR077W ASP3-1P0CZ17 362 aa3.87□□□□□ -1.79
MSA2YKR077W PMT2P31382 759 aa3.87□□□□□ -1.79
MSA2YKR077W ZUO1P32527 433 aaKnown RBP3.87□□□□□ -1.79
MSA2YKR077W ATG7P38862 630 aa3.87□□□□□ -1.79
MSA2YKR077W RBG1P39729 369 aa3.87□□□□□ -1.79
MSA2YKR077W AIM23P47015 356 aa3.87□□□□□ -1.79
MSA2YKR077W RNH201P53942 307 aa3.87□□□□□ -1.79
MSA2YKR077W SAG1P20840 650 aa3.86□□□□□ -1.79
MSA2YKR077W MRPS5P33759 307 aa3.86□□□□□ -1.79
MSA2YKR077W YHR122WP38829 231 aa3.86□□□□□ -1.79
MSA2YKR077W YHC3P47040 408 aa3.86□□□□□ -1.79
MSA2YKR077W EFM3P47163 339 aa3.86□□□□□ -1.79
MSA2YKR077W CUE3P53137 624 aaKnown RBP3.86□□□□□ -1.79
MSA2YKR077W YGR015CP53208 328 aa3.86□□□□□ -1.79
MSA2YKR077W SLT2Q00772 484 aa3.86□□□□□ -1.79
MSA2YKR077W APC5Q08683 685 aa3.86□□□□□ -1.79
MSA2YKR077W SRO7Q12038 1033 aa3.86□□□□□ -1.79
MSA2YKR077W SLM3Q12093 417 aa3.86□□□□□ -1.79
MSA2YKR077W ARF2P19146 181 aaKnown RBP3.85□□□□□ -1.79
MSA2YKR077W PDC2P32896 925 aa3.85□□□□□ -1.79
MSA2YKR077W CHL4P38907 458 aa3.85□□□□□ -1.79
MSA2YKR077W YJR054WP47114 497 aa3.85□□□□□ -1.79
MSA2YKR077W CDH1P53197 566 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms