RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W PXR1P53335 271 aaPredicted RBP2.38□□□□□ -2.03
TRM2YKR056W CDC14Q00684 551 aa2.38□□□□□ -2.03
TRM2YKR056W RVB1Q03940 463 aaKnown RBP2.38□□□□□ -2.03
TRM2YKR056W TIM18Q08749 192 aa2.38□□□□□ -2.03
TRM2YKR056W RAX1Q08760 435 aa2.38□□□□□ -2.03
TRM2YKR056W SIA1Q12212 622 aa2.38□□□□□ -2.03
TRM2YKR056W TPT1Q12272 230 aaKnown RBP2.38□□□□□ -2.03
TRM2YKR056W APC2Q12440 853 aa2.38□□□□□ -2.03
TRM2YKR056W YBL111CQ3E7Y5 667 aa2.38□□□□□ -2.03
TRM2YKR056W RGS2Q99188 309 aa2.38□□□□□ -2.03
TRM2YKR056W TDH2P00358 332 aaKnown RBP2.38□□□□□ -2.03
TRM2YKR056W PAB1P04147 577 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
TRM2YKR056W YAR066WP0CX18 203 aa2.38□□□□□ -2.03
TRM2YKR056W YHR214WP0CX19 203 aa2.38□□□□□ -2.03
TRM2YKR056W YFL068WP0CX99 160 aa2.38□□□□□ -2.03
TRM2YKR056W YLL066W-AP0CY00 160 aa2.38□□□□□ -2.03
TRM2YKR056W YLL067W-AP0CY01 160 aa2.38□□□□□ -2.03
TRM2YKR056W MATALPHA1P0CY06 175 aa2.38□□□□□ -2.03
TRM2YKR056W HMLALPHA1P0CY07 175 aa2.38□□□□□ -2.03
TRM2YKR056W SPO11P23179 398 aa2.38□□□□□ -2.03
TRM2YKR056W YCP4P25349 247 aaKnown RBP2.38□□□□□ -2.03
TRM2YKR056W TMT1P32643 299 aa2.38□□□□□ -2.03
TRM2YKR056W SIP3P38717 1229 aa2.38□□□□□ -2.03
TRM2YKR056W BIG1P38813 335 aa2.38□□□□□ -2.03
TRM2YKR056W FMC1P40491 155 aa2.38□□□□□ -2.03
TRM2YKR056W SSN8P47821 323 aa2.38□□□□□ -2.03
TRM2YKR056W KAP114P53067 1004 aa2.38□□□□□ -2.03
TRM2YKR056W PGA2P53903 129 aa2.38□□□□□ -2.03
TRM2YKR056W HXT11P54862 567 aa2.38□□□□□ -2.03
TRM2YKR056W RPM2Q02773 1202 aa2.38□□□□□ -2.03
TRM2YKR056W MRPS17Q03246 237 aaPredicted RBP2.38□□□□□ -2.03
TRM2YKR056W YMR209CQ03648 457 aa2.38□□□□□ -2.03
TRM2YKR056W CCE1Q03702 353 aa2.38□□□□□ -2.03
TRM2YKR056W ENT5Q03769 411 aaKnown RBP2.38□□□□□ -2.03
TRM2YKR056W MYO5Q04439 1219 aaKnown RBP2.38□□□□□ -2.03
TRM2YKR056W YLR283WQ05867 314 aa2.38□□□□□ -2.03
TRM2YKR056W PBP4Q07362 185 aaKnown RBP2.38□□□□□ -2.03
TRM2YKR056W CMS1Q07897 291 aaKnown RBP2.38□□□□□ -2.03
TRM2YKR056W SDO1Q07953 250 aaKnown RBP2.38□□□□□ -2.03
TRM2YKR056W CLP1Q08685 445 aaPredicted RBP2.38□□□□□ -2.03
TRM2YKR056W BTS1Q12051 335 aa2.38□□□□□ -2.03
TRM2YKR056W RAD3P06839 778 aa2.37□□□□□ -2.03
TRM2YKR056W MRS3P10566 314 aa2.37□□□□□ -2.03
TRM2YKR056W MDM10P18409 493 aa2.37□□□□□ -2.03
TRM2YKR056W EXO70P19658 623 aa2.37□□□□□ -2.03
TRM2YKR056W YAP1P19880 650 aaKnown RBP2.37□□□□□ -2.03
TRM2YKR056W SLY1P22213 666 aa2.37□□□□□ -2.03
TRM2YKR056W DCC1P25559 380 aa2.37□□□□□ -2.03
TRM2YKR056W YCR016WP25617 290 aaKnown RBP2.37□□□□□ -2.03
TRM2YKR056W PHA2P32452 334 aa2.37□□□□□ -2.03
TRM2YKR056W GCG1P32656 232 aaKnown RBP2.37□□□□□ -2.03
TRM2YKR056W CBF5P33322 483 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
TRM2YKR056W TIR2P33890 251 aa2.37□□□□□ -2.03
TRM2YKR056W BMH2P34730 273 aaKnown RBP2.37□□□□□ -2.03
TRM2YKR056W AGP3P43548 558 aa2.37□□□□□ -2.03
TRM2YKR056W RTT101P47050 842 aa2.37□□□□□ -2.03
TRM2YKR056W TIS11P47977 285 aa2.37□□□□□ -2.03
TRM2YKR056W SEH1P53011 349 aaKnown RBP2.37□□□□□ -2.03
TRM2YKR056W YNL181WP53878 407 aa2.37□□□□□ -2.03
TRM2YKR056W STP1Q00947 519 aa2.37□□□□□ -2.03
TRM2YKR056W YPL080CQ02826 108 aa2.37□□□□□ -2.03
TRM2YKR056W BCH1Q05029 724 aa2.37□□□□□ -2.03
TRM2YKR056W SHS1Q07657 551 aa2.37□□□□□ -2.03
TRM2YKR056W ATX2Q12067 313 aa2.37□□□□□ -2.03
TRM2YKR056W YLR108CQ12259 485 aa2.37□□□□□ -2.03
TRM2YKR056W SET6Q12529 373 aa2.37□□□□□ -2.03
TRM2YKR056W POM152P39685 1337 aa2.37□□□□□ -2.03
TRM2YKR056W ATP6P00854 259 aa2.36□□□□□ -2.03
TRM2YKR056W SAM2P19358 384 aaKnown RBP2.36□□□□□ -2.03
TRM2YKR056W MRPL8P22353 238 aa2.36□□□□□ -2.03
TRM2YKR056W AIM17P23180 465 aaKnown RBP2.36□□□□□ -2.03
TRM2YKR056W RRT12P25381 491 aa2.36□□□□□ -2.03
TRM2YKR056W PRS4P38063 326 aaPredicted RBP2.36□□□□□ -2.03
TRM2YKR056W YHK8P38776 514 aa2.36□□□□□ -2.03
TRM2YKR056W GEP4P38812 185 aa2.36□□□□□ -2.03
TRM2YKR056W PCL6P40038 420 aa2.36□□□□□ -2.03
TRM2YKR056W JLP2P40206 208 aa2.36□□□□□ -2.03
TRM2YKR056W SEC9P40357 651 aa2.36□□□□□ -2.03
TRM2YKR056W KEG1P43614 200 aa2.36□□□□□ -2.03
TRM2YKR056W AIM24P47127 394 aa2.36□□□□□ -2.03
TRM2YKR056W BET4Q00618 327 aa2.36□□□□□ -2.03
TRM2YKR056W HER2Q03557 464 aa2.36□□□□□ -2.03
TRM2YKR056W YMR254CQ04838 102 aa2.36□□□□□ -2.03
TRM2YKR056W ECI1Q05871 280 aa2.36□□□□□ -2.03
TRM2YKR056W GMC2Q06201 188 aa2.36□□□□□ -2.03
TRM2YKR056W VPS74Q06385 345 aa2.36□□□□□ -2.03
TRM2YKR056W ALE1Q08548 619 aa2.36□□□□□ -2.03
TRM2YKR056W SAM4Q08985 325 aaKnown RBP2.36□□□□□ -2.03
TRM2YKR056W RAD7P06779 565 aa2.36□□□□□ -2.03
TRM2YKR056W GLN3P18494 730 aa2.36□□□□□ -2.03
TRM2YKR056W APA2P22108 325 aa2.36□□□□□ -2.03
TRM2YKR056W YSR3P23501 404 aa2.36□□□□□ -2.03
TRM2YKR056W RNA14P25298 677 aaKnown RBP2.36□□□□□ -2.03
TRM2YKR056W SKG6P32900 734 aaPredicted RBP2.36□□□□□ -2.03
TRM2YKR056W MNS1P32906 549 aa2.36□□□□□ -2.03
TRM2YKR056W PPZ2P33329 710 aa2.36□□□□□ -2.03
TRM2YKR056W RSM22P36056 628 aa2.36□□□□□ -2.03
TRM2YKR056W YMR262WP38430 313 aa2.36□□□□□ -2.03
TRM2YKR056W RBG1P39729 369 aa2.36□□□□□ -2.03
TRM2YKR056W COA1P40452 197 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms