RNA–Protein interactions for RNA: YKL118W

YKL118W, Transcript of Dubious open reading frame, yeast

Gene YKL118W, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL118W	YKL118W	YDL109C	Q12103	647 aa		0.88	□□□□□ -2.27
YKL118W	YKL118W	OPI3	P05375	206 aa		0.87	□□□□□ -2.27
YKL118W	YKL118W	HPR1	P17629	752 aa	Known RBP	0.87	□□□□□ -2.27
YKL118W	YKL118W	MED6	P38782	295 aa		0.87	□□□□□ -2.27
YKL118W	YKL118W	SEC27	P41811	889 aa	Known RBP	0.87	□□□□□ -2.27
YKL118W	YKL118W	TOM22	P49334	152 aa		0.87	□□□□□ -2.27
YKL118W	YKL118W	ROG1	P53118	685 aa		0.87	□□□□□ -2.27
YKL118W	YKL118W	SLT2	Q00772	484 aa		0.87	□□□□□ -2.27
YKL118W	YKL118W	GMC1	Q04399	608 aa		0.87	□□□□□ -2.27
YKL118W	YKL118W	MMR1	Q06324	491 aa		0.87	□□□□□ -2.27
YKL118W	YKL118W	RLP24	Q07915	199 aa	Known RBP	0.87	□□□□□ -2.27
YKL118W	YKL118W	MED2	Q12124	431 aa		0.87	□□□□□ -2.27
YKL118W	YKL118W	YRF1-4	O13559	1382 aa		0.86	□□□□□ -2.27
YKL118W	YKL118W	MET2	P08465	486 aa		0.86	□□□□□ -2.27
YKL118W	YKL118W	DAL81	P21657	970 aa		0.86	□□□□□ -2.27
YKL118W	YKL118W	MIR1	P23641	311 aa	Known RBP	0.86	□□□□□ -2.27
YKL118W	YKL118W	PMT2	P31382	759 aa		0.86	□□□□□ -2.27
YKL118W	YKL118W	TOA2	P32774	122 aa		0.86	□□□□□ -2.27
YKL118W	YKL118W	TIP20	P33891	701 aa		0.86	□□□□□ -2.27
YKL118W	YKL118W	OLA1	P38219	394 aa	Known RBP	0.86	□□□□□ -2.27
YKL118W	YKL118W	SMC2	P38989	1170 aa	Known RBP	0.86	□□□□□ -2.27
YKL118W	YKL118W	HSH155	P49955	971 aa	Known RBP	0.86	□□□□□ -2.27
YKL118W	YKL118W	CWC22	P53333	577 aa	Known RBP	0.86	□□□□□ -2.27
YKL118W	YKL118W	RNH203	Q12338	110 aa		0.86	□□□□□ -2.27
YKL118W	YKL118W	PRP46	Q12417	451 aa	Predicted RBP	0.86	□□□□□ -2.27
YKL118W	YKL118W	TDH2	P00358	332 aa	Known RBP	0.85	□□□□□ -2.27
YKL118W	YKL118W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	not detected
YKL118W	YKL118W	RPL23A	P0CX41	137 aa	Known RBP	0.85	□□□□□ -2.27
YKL118W	YKL118W	RPL23B	P0CX42	137 aa	Known RBP	0.85	□□□□□ -2.27
YKL118W	YKL118W	SLM5	P25345	492 aa	Known RBP	0.85	□□□□□ -2.27
YKL118W	YKL118W	ERG3	P32353	365 aa		0.85	□□□□□ -2.27
YKL118W	YKL118W	AIM23	P47015	356 aa		0.85	□□□□□ -2.27
YKL118W	YKL118W	PMT5	P52867	743 aa		0.85	□□□□□ -2.27
YKL118W	YKL118W	RPT4	P53549	437 aa	Known RBP	0.85	□□□□□ -2.27
YKL118W	YKL118W	ROY1	Q04847	553 aa		0.85	□□□□□ -2.27
YKL118W	YKL118W	MMT2	Q08970	484 aa		0.85	□□□□□ -2.27
YKL118W	YKL118W	MED1	Q12321	566 aa		0.85	□□□□□ -2.27
YKL118W	YKL118W	RPS14A	P06367	137 aa	Known RBP	0.84	□□□□□ -2.27
YKL118W	YKL118W	RPL12A	P0CX53	165 aa	Known RBP	0.84	□□□□□ -2.27
YKL118W	YKL118W	RPL12B	P0CX54	165 aa		0.84	□□□□□ -2.27
YKL118W	YKL118W	MRP7	P12687	371 aa		0.84	□□□□□ -2.27
YKL118W	YKL118W	HSP104	P31539	908 aa	Known RBP	0.84	□□□□□ -2.27
YKL118W	YKL118W	DOA1	P36037	715 aa		0.84	□□□□□ -2.27
YKL118W	YKL118W	RPS14B	P39516	138 aa	Known RBP	0.84	□□□□□ -2.27
YKL118W	YKL118W	RTS3	P53289	263 aa		0.84	□□□□□ -2.27
YKL118W	YKL118W	YPL080C	Q02826	108 aa		0.84	□□□□□ -2.27
YKL118W	YKL118W	PRP3	Q03338	469 aa	Predicted RBP	0.84	□□□□□ -2.27
YKL118W	YKL118W	YDR222W	Q04925	415 aa		0.84	□□□□□ -2.27
YKL118W	YKL118W	GAS2	Q06135	555 aa		0.84	□□□□□ -2.27
YKL118W	YKL118W	ARF1	P11076	181 aa	Known RBP	0.83	□□□□□ -2.28
YKL118W	YKL118W	BGL2	P15703	313 aa	Known RBP	0.83	□□□□□ -2.28
YKL118W	YKL118W	KRE1	P17260	313 aa		0.83	□□□□□ -2.28
YKL118W	YKL118W	PCL7	P40186	285 aa		0.83	□□□□□ -2.28
YKL118W	YKL118W	ASG7	P46993	209 aa		0.83	□□□□□ -2.28
YKL118W	YKL118W	MRPL19	P53875	158 aa		0.83	□□□□□ -2.28
YKL118W	YKL118W	YPR063C	Q12160	140 aa		0.83	□□□□□ -2.28
YKL118W	YKL118W	PGA3	Q12746	312 aa	Known RBP	0.83	□□□□□ -2.28
YKL118W	YKL118W	RED1	P14291	827 aa		0.82	□□□□□ -2.28
YKL118W	YKL118W	REC107	P21651	314 aa		0.82	□□□□□ -2.28
YKL118W	YKL118W	SLM4	P38247	162 aa		0.82	□□□□□ -2.28
YKL118W	YKL118W	UTP15	Q04305	513 aa	Known RBP	0.82	□□□□□ -2.28
YKL118W	YKL118W	GAT3	Q07928	141 aa		0.82	□□□□□ -2.28
YKL118W	YKL118W	YDR018C	Q12185	396 aa		0.82	□□□□□ -2.28
YKL118W	YKL118W	AFI1	Q99222	893 aa		0.82	□□□□□ -2.28
YKL118W	YKL118W	YCR051W	P25631	222 aa		0.81	□□□□□ -2.28
YKL118W	YKL118W	RPB9	P27999	122 aa		0.81	□□□□□ -2.28
YKL118W	YKL118W	RIM1	P32445	135 aa	Known RBP	0.81	□□□□□ -2.28
YKL118W	YKL118W	SER3	P40054	469 aa		0.81	□□□□□ -2.28
YKL118W	YKL118W	BUD13	P46947	266 aa	Predicted RBP	0.81	□□□□□ -2.28
YKL118W	YKL118W	ERO1	Q03103	563 aa		0.81	□□□□□ -2.28
YKL118W	YKL118W	YDR114C	Q04597	100 aa		0.81	□□□□□ -2.28
YKL118W	YKL118W	ECM19	Q06011	112 aa		0.81	□□□□□ -2.28
YKL118W	YKL118W	ARR1	Q06596	294 aa		0.81	□□□□□ -2.28
YKL118W	YKL118W	QDR3	P38227	689 aa		0.8	□□□□□ -2.28
YKL118W	YKL118W	ZTA1	P38230	334 aa	Known RBP	0.8	□□□□□ -2.28
YKL118W	YKL118W	YER084W	P40057	128 aa		0.8	□□□□□ -2.28
YKL118W	YKL118W	SCS7	Q03529	384 aa		0.8	□□□□□ -2.28
YKL118W	YKL118W	URC2	Q04411	772 aa		0.8	□□□□□ -2.28
YKL118W	YKL118W	YDR341C	Q05506	607 aa	Known RBP	0.8	□□□□□ -2.28
YKL118W	YKL118W	DXO1	Q06349	442 aa		0.8	□□□□□ -2.28
YKL118W	YKL118W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
YKL118W	YKL118W	BYE1	P36106	594 aa		0.79	□□□□□ -2.28
YKL118W	YKL118W	GPD2	P41911	440 aa	Known RBP	0.79	□□□□□ -2.28
YKL118W	YKL118W	YCH1	P42937	148 aa		0.79	□□□□□ -2.28
YKL118W	YKL118W	EFM3	P47163	339 aa		0.79	□□□□□ -2.28
YKL118W	YKL118W	TAF11	Q04226	346 aa		0.79	□□□□□ -2.28
YKL118W	YKL118W	CSI1	Q04368	295 aa		0.79	□□□□□ -2.28
YKL118W	YKL118W	PEX30	Q06169	523 aa		0.79	□□□□□ -2.28
YKL118W	YKL118W	NSE1	Q07913	336 aa		0.79	□□□□□ -2.28
YKL118W	YKL118W	VPS54	Q12071	889 aa		0.79	□□□□□ -2.28
YKL118W	YKL118W	ADH3	P07246	375 aa	Known RBP	0.78	□□□□□ -2.28
YKL118W	YKL118W	SSE1	P32589	693 aa	Known RBP	0.78	□□□□□ -2.28
YKL118W	YKL118W	TAE1	P38340	232 aa		0.78	□□□□□ -2.28
YKL118W	YKL118W	BNI5	P53890	448 aa	Known RBP	0.78	□□□□□ -2.28
YKL118W	YKL118W	YMR244W	Q04018	355 aa		0.78	□□□□□ -2.28
YKL118W	YKL118W	SGT2	Q12118	346 aa	Known RBP	0.78	□□□□□ -2.28
YKL118W	YKL118W	DFM1	Q12743	341 aa	Known RBP	0.78	□□□□□ -2.28
YKL118W	YKL118W	RNA1	P11745	407 aa	Known RBP	0.77	□□□□□ -2.29
YKL118W	YKL118W	CTA1	P15202	515 aa		0.77	□□□□□ -2.29
YKL118W	YKL118W	RSA4	P25382	515 aa	Known RBP	0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms