RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	YGR066C	P53242	292 aa		3.36	□□□□□ -1.87
SGN1	YIR001C	RCF2	P53721	224 aa		3.36	□□□□□ -1.87
SGN1	YIR001C	VPS60	Q03390	229 aa		3.36	□□□□□ -1.87
SGN1	YIR001C	YMR111C	Q04461	462 aa	Predicted RBP	3.36	□□□□□ -1.87
SGN1	YIR001C	HRI1	Q05905	244 aa	Known RBP	3.36	□□□□□ -1.87
SGN1	YIR001C	VPS74	Q06385	345 aa		3.36	□□□□□ -1.87
SGN1	YIR001C	YDL121C	Q07541	149 aa		3.36	□□□□□ -1.87
SGN1	YIR001C	YOL019W	Q08157	551 aa		3.36	□□□□□ -1.87
SGN1	YIR001C	GPN2	Q08726	347 aa	Predicted RBP	3.36	□□□□□ -1.87
SGN1	YIR001C	RRG7	Q08774	242 aa	Predicted RBP	3.36	□□□□□ -1.87
SGN1	YIR001C	RSA1	Q08932	381 aa		3.36	□□□□□ -1.87
SGN1	YIR001C	NCE102	Q12207	173 aa	RIP-Chip data	3.36	□□□□□ -1.87	not detected
SGN1	YIR001C	ALG7	P07286	448 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	PET111	P08468	800 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	RNA1	P11745	407 aa	Known RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	GAL3	P13045	520 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	MCK1	P21965	375 aa	Known RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	RVS161	P25343	265 aa	Known RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	CAT2	P32796	670 aa	Known RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	LOS1	P33418	1100 aa	Predicted RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	SCO2	P38072	301 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	DTR1	P38125	572 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	EXO84	P38261	753 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	YMR262W	P38430	313 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	YGP1	P38616	354 aa	Known RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	PRS3	P38689	320 aa	Known RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	RPP1	P38786	293 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	BZZ1	P38822	633 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	LIN1	P38852	340 aa	Predicted RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	PTH1	P38876	190 aa	Known RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	SEC31	P38968	1273 aa	Known RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	YJL193W	P39542	402 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	SEN34	P39707	275 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	ALG5	P40350	334 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	YJR039W	P47107	1121 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	URB2	P47108	1174 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	LIA1	P47120	325 aa	Known RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	PRP31	P49704	494 aa	Predicted RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	HOS2	P53096	452 aa	Predicted RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	NCE101	Q02820	53 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	YDR124W	Q04608	324 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	PAL1	Q05518	499 aa	Known RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	BUR2	Q05949	395 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	ACF2	Q12168	779 aa		3.35	□□□□□ -1.87
SGN1	YIR001C	FOL3	Q12676	427 aa	Predicted RBP	3.35	□□□□□ -1.87
SGN1	YIR001C	URA2	P07259	2214 aa	Known RBP	3.34	□□□□□ -1.87
SGN1	YIR001C	PDA1	P16387	420 aa	Known RBP	3.34	□□□□□ -1.87
SGN1	YIR001C	PDX1	P16451	410 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	YAP1	P19880	650 aa	Known RBP	3.34	□□□□□ -1.87
SGN1	YIR001C	AIM17	P23180	465 aa	Known RBP	3.34	□□□□□ -1.87
SGN1	YIR001C	PBN1	P25580	416 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	ILV6	P25605	309 aa	Known RBP	3.34	□□□□□ -1.87
SGN1	YIR001C	SPC29	P33419	253 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	CAF4	P36130	643 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	YEN1	P40028	759 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	SHO1	P40073	367 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	GAT2	P40209	560 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	VHR1	P40522	640 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	ARC1	P46672	376 aa	Known RBP	3.34	□□□□□ -1.87
SGN1	YIR001C	AAD10	P47182	288 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	MSY1	P48527	492 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	TOM22	P49334	152 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	UBC9	P50623	157 aa	Predicted RBP	3.34	□□□□□ -1.87
SGN1	YIR001C	TAF6	P53040	516 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	UBX4	P54730	416 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	YMR310C	Q04867	317 aa	Predicted RBP	3.34	□□□□□ -1.87
SGN1	YIR001C	COS7	Q07788	383 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	HNT3	Q08702	217 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	UAF30	Q08747	228 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	SLF1	Q12034	447 aa	Known RBP	3.34	□□□□□ -1.87
SGN1	YIR001C	SPO24	Q3E752	67 aa		3.34	□□□□□ -1.87
SGN1	YIR001C	YPR096C	O13587	100 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	RAS2	P01120	322 aa	Known RBP	3.33	□□□□□ -1.88
SGN1	YIR001C	HEM4	P06174	275 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	ADE5,7	P07244	802 aa	Known RBP	3.33	□□□□□ -1.88
SGN1	YIR001C	PRB1	P09232	635 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	BAR1	P12630	587 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	RPO26	P20435	155 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	RPI1	P23250	407 aa	Known RBP	3.33	□□□□□ -1.88
SGN1	YIR001C	CTR86	P25355	563 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	DMC1	P25453	334 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	NUP2	P32499	720 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	TDP1	P38319	544 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	ARN2	P38724	620 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	NSG1	P38837	291 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	ECM10	P39987	644 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	YER010C	P40011	234 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	YJL068C	P40363	299 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	RLP7	P40693	322 aa	Known RBP	3.33	□□□□□ -1.88
SGN1	YIR001C	ARF3	P40994	183 aa	RIP-Chip data	3.33	□□□□□ -1.88	not detected
SGN1	YIR001C	GPP1	P41277	250 aa	Known RBP	3.33	□□□□□ -1.88
SGN1	YIR001C	SSY5	P47002	699 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	PAC10	P48363	199 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	NAS6	P50086	228 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	LSG1	P53145	640 aa	Known RBP	3.33	□□□□□ -1.88
SGN1	YIR001C	YNR068C	P53754	272 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	SWP1	Q02795	286 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	INP1	Q03694	420 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	RAF1	Q06891	181 aa		3.33	□□□□□ -1.88
SGN1	YIR001C	PML1	Q07930	204 aa	Predicted RBP	3.33	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms