RNA–Protein interactions for RNA: YGR261C

APL6, Transcript of Beta3-like subunit of the yeast AP-3 complex, yeast

Gene APL6, Length 2,430 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL6	YGR261C	YBR085C-A	O43137	85 aa		4.64	□□□□□ -1.67
APL6	YGR261C	PUT2	P07275	575 aa		4.64	□□□□□ -1.67
APL6	YGR261C	DCC1	P25559	380 aa		4.64	□□□□□ -1.67
APL6	YGR261C	PRE2	P30656	287 aa	Known RBP	4.64	□□□□□ -1.67
APL6	YGR261C	TVP38	P36164	337 aa		4.64	□□□□□ -1.67
APL6	YGR261C	GOS1	P38736	223 aa		4.64	□□□□□ -1.67
APL6	YGR261C	WSC4	P38739	605 aa		4.64	□□□□□ -1.67
APL6	YGR261C	YHR177W	P38867	453 aa		4.64	□□□□□ -1.67
APL6	YGR261C	GPI16	P38875	610 aa		4.64	□□□□□ -1.67
APL6	YGR261C	UBP5	P39944	805 aa		4.64	□□□□□ -1.67
APL6	YGR261C	JHD2	P47156	728 aa	Predicted RBP	4.64	□□□□□ -1.67
APL6	YGR261C	JAC1	P53193	184 aa		4.64	□□□□□ -1.67
APL6	YGR261C	TPS1	Q00764	495 aa	Known RBP	4.64	□□□□□ -1.67
APL6	YGR261C	CCE1	Q03702	353 aa		4.64	□□□□□ -1.67
APL6	YGR261C	HRD3	Q05787	833 aa		4.64	□□□□□ -1.67
APL6	YGR261C	BUD20	Q08004	166 aa	Predicted RBP	4.64	□□□□□ -1.67
APL6	YGR261C	IES3	Q12345	250 aa		4.64	□□□□□ -1.67
APL6	YGR261C	AIM45	Q12480	344 aa	Known RBP	4.64	□□□□□ -1.67
APL6	YGR261C	YOR304C-A	O14468	76 aa		4.63	□□□□□ -1.67
APL6	YGR261C	RPS28B	P0C0X0	67 aa	Known RBP	4.63	□□□□□ -1.67
APL6	YGR261C	CPT1	P17898	393 aa		4.63	□□□□□ -1.67
APL6	YGR261C	TMT1	P32643	299 aa		4.63	□□□□□ -1.67
APL6	YGR261C	FMP23	P38231	175 aa		4.63	□□□□□ -1.67
APL6	YGR261C	HIS2	P38635	335 aa		4.63	□□□□□ -1.67
APL6	YGR261C	PAC2	P39937	518 aa		4.63	□□□□□ -1.67
APL6	YGR261C	PAC10	P48363	199 aa		4.63	□□□□□ -1.67
APL6	YGR261C	PHB2	P50085	310 aa		4.63	□□□□□ -1.67
APL6	YGR261C	YNR040W	P53736	256 aa		4.63	□□□□□ -1.67
APL6	YGR261C	KIN4	Q01919	800 aa		4.63	□□□□□ -1.67
APL6	YGR261C	PLM2	Q04383	521 aa		4.63	□□□□□ -1.67
APL6	YGR261C	SSK1	Q07084	712 aa		4.63	□□□□□ -1.67
APL6	YGR261C	TAF10	Q12030	206 aa		4.63	□□□□□ -1.67
APL6	YGR261C	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.63	□□□□□ -1.67
APL6	YGR261C	NSP1	P14907	823 aa	Known RBP	4.63	□□□□□ -1.67
APL6	YGR261C	PET9	P18239	318 aa	Known RBP	4.63	□□□□□ -1.67
APL6	YGR261C	RSA4	P25382	515 aa	Known RBP	4.63	□□□□□ -1.67
APL6	YGR261C	PUT3	P25502	979 aa	Predicted RBP	4.63	□□□□□ -1.67
APL6	YGR261C	YCR015C	P25616	317 aa		4.63	□□□□□ -1.67
APL6	YGR261C	URK1	P27515	501 aa		4.63	□□□□□ -1.67
APL6	YGR261C	MYO3	P36006	1272 aa		4.63	□□□□□ -1.67
APL6	YGR261C	SRL3	P36167	246 aa		4.63	□□□□□ -1.67
APL6	YGR261C	DIA4	P38705	446 aa	Predicted RBP	4.63	□□□□□ -1.67
APL6	YGR261C	LSM12	P38828	187 aa	Known RBP	4.63	□□□□□ -1.67
APL6	YGR261C	PHO90	P39535	881 aa		4.63	□□□□□ -1.67
APL6	YGR261C	DSE1	P40077	573 aa		4.63	□□□□□ -1.67
APL6	YGR261C	CSM2	P40465	213 aa		4.63	□□□□□ -1.67
APL6	YGR261C	TAX4	P47030	604 aa		4.63	□□□□□ -1.67
APL6	YGR261C	BNA3	P47039	444 aa	Known RBP	4.63	□□□□□ -1.67
APL6	YGR261C	FAR10	Q06001	478 aa		4.63	□□□□□ -1.67
APL6	YGR261C	POS5	Q06892	414 aa		4.63	□□□□□ -1.67
APL6	YGR261C	YNG1	Q08465	219 aa		4.63	□□□□□ -1.67
APL6	YGR261C	STH1	P32597	1359 aa		4.63	□□□□□ -1.67
APL6	YGR261C	ARG82	P07250	355 aa		4.62	□□□□□ -1.67
APL6	YGR261C	PPZ1	P26570	692 aa		4.62	□□□□□ -1.67
APL6	YGR261C	EHD3	P28817	500 aa		4.62	□□□□□ -1.67
APL6	YGR261C	SSN3	P39073	555 aa		4.62	□□□□□ -1.67
APL6	YGR261C	YGR210C	P42942	411 aa		4.62	□□□□□ -1.67
APL6	YGR261C	YFH7	P43591	353 aa		4.62	□□□□□ -1.67
APL6	YGR261C	UBX6	P47049	396 aa		4.62	□□□□□ -1.67
APL6	YGR261C	PRP24	P49960	444 aa	Known RBP	4.62	□□□□□ -1.67
APL6	YGR261C	COG5	P53951	403 aa		4.62	□□□□□ -1.67
APL6	YGR261C	FRQ1	Q06389	190 aa		4.62	□□□□□ -1.67
APL6	YGR261C	OPT2	Q06593	877 aa		4.62	□□□□□ -1.67
APL6	YGR261C	ELG1	Q12050	791 aa		4.62	□□□□□ -1.67
APL6	YGR261C	TRM732	Q03496	1420 aa		4.62	□□□□□ -1.67
APL6	YGR261C	YML003W	P0CF16	290 aa		4.62	□□□□□ -1.67
APL6	YGR261C	NAM2	P11325	894 aa		4.62	□□□□□ -1.67
APL6	YGR261C	CAT2	P32796	670 aa	Known RBP	4.62	□□□□□ -1.67
APL6	YGR261C	SOF1	P33750	489 aa	Known RBP	4.62	□□□□□ -1.67
APL6	YGR261C	PRX1	P34227	261 aa	Known RBP	4.62	□□□□□ -1.67
APL6	YGR261C	YKL162C	P36052	402 aa		4.62	□□□□□ -1.67
APL6	YGR261C	APN2	P38207	520 aa		4.62	□□□□□ -1.67
APL6	YGR261C	VHC1	P38329	1120 aa		4.62	□□□□□ -1.67
APL6	YGR261C	SHG1	P38337	142 aa		4.62	□□□□□ -1.67
APL6	YGR261C	BTT1	P40314	149 aa	Predicted RBP	4.62	□□□□□ -1.67
APL6	YGR261C	BMT5	P40493	336 aa		4.62	□□□□□ -1.67
APL6	YGR261C	GCV1	P48015	400 aa		4.62	□□□□□ -1.67
APL6	YGR261C	ARI1	P53111	347 aa	Known RBP	4.62	□□□□□ -1.67
APL6	YGR261C	POM33	Q12164	279 aa		4.62	□□□□□ -1.67
APL6	YGR261C	MF(ALPHA)1	P01149	165 aa		4.61	□□□□□ -1.67
APL6	YGR261C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
APL6	YGR261C	RFA1	P22336	621 aa	Known RBP	4.61	□□□□□ -1.67
APL6	YGR261C	YSP3	P25036	478 aa		4.61	□□□□□ -1.67
APL6	YGR261C	YSC83	P32792	385 aa		4.61	□□□□□ -1.67
APL6	YGR261C	VAM7	P32912	316 aa		4.61	□□□□□ -1.67
APL6	YGR261C	TRM2	P33753	639 aa		4.61	□□□□□ -1.67
APL6	YGR261C	SCO2	P38072	301 aa		4.61	□□□□□ -1.67
APL6	YGR261C	ELO1	P39540	310 aa		4.61	□□□□□ -1.67
APL6	YGR261C	BDH2	P39713	417 aa		4.61	□□□□□ -1.67
APL6	YGR261C	LSB6	P42951	607 aa		4.61	□□□□□ -1.67
APL6	YGR261C	YFL054C	P43549	646 aa		4.61	□□□□□ -1.67
APL6	YGR261C	CIN2	P46670	268 aa		4.61	□□□□□ -1.67
APL6	YGR261C	COS6	P53344	381 aa		4.61	□□□□□ -1.67
APL6	YGR261C	DPP1	Q05521	289 aa		4.61	□□□□□ -1.67
APL6	YGR261C	MHR1	Q06630	226 aa		4.61	□□□□□ -1.67
APL6	YGR261C	CDC28	P00546	298 aa	Known RBP	4.61	□□□□□ -1.67
APL6	YGR261C	RPL25	P04456	142 aa	Known RBP	4.61	□□□□□ -1.67
APL6	YGR261C	MRPS28	P21771	286 aa		4.61	□□□□□ -1.67
APL6	YGR261C	LRE1	P25579	583 aa	Known RBP	4.61	□□□□□ -1.67
APL6	YGR261C	MSS1	P32559	526 aa	Predicted RBP	4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms