RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B TAF9Q05027 157 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B GLO2Q05584 274 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B RRS1Q08746 203 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B OCA6Q12454 224 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B RPS28AQ3E7X9 67 aaPredicted RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B MEX67Q99257 599 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B HIS1P00498 297 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B CBS1P14066 229 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B PDA1P16387 420 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B SNF6P18888 332 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B ARF2P19146 181 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B DBR1P24309 405 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B ATG15P25641 520 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B BEM1P29366 551 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B MRP20P32387 263 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B SEO1P39709 593 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B YIR014WP40570 242 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B YFL067WP43537 175 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B ABM1P47146 123 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B YPT32P51996 222 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B DSD1P53095 428 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B RBS1Q05672 457 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B SWC7Q06707 132 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B RTT109Q07794 436 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B THI20Q08224 551 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B FRE3Q08905 711 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B DDC1Q08949 612 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B NFI1Q12216 726 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B ADF1Q2V2Q1 113 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B LYS2P07702 1392 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B CFT1Q06632 1357 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B GEA1P47102 1408 aaPredicted RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B TDH1P00360 332 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B REV1P12689 985 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B TAL1P15019 335 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B CDC42P19073 191 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B ARO7P32178 256 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B PIM1P36775 1133 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B AAP1P37898 856 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B MAK5P38112 773 aaPredicted RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B RTC2P38279 296 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B RCK2P38623 610 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B STP2P38704 541 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B DHH1P39517 506 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B YND1P40009 630 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B YGR149WP48236 432 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B SPG1P50088 95 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B YLR283WQ05867 314 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B SPO77Q06134 477 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B YLR173WQ06247 608 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B HRD1Q08109 551 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B IES3Q12345 250 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B LSO2Q3E772 92 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B MTR10Q99189 972 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B URK1P27515 501 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B APE2P32454 952 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B KDX1P36005 433 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B SHE3P38272 425 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B AST2P39945 430 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B IRC6P43615 237 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B SBH2P52871 88 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B ZPR1P53303 486 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B IPI3P53877 555 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YPL107WQ02873 248 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YMR160WQ03823 816 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B RVB1Q03940 463 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B YKU80Q04437 629 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B PEX10Q05568 337 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B ATP16Q12165 160 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YOR214CQ12282 236 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B URB1P34241 1764 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B YMR316C-AI2HB70 103 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B COX1P00401 534 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B CBP2P03874 630 aaPredicted RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B MATALPHA2P0CY08 210 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B HMLALPHA2P0CY09 210 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B RSR1P13856 272 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B SNA3P14359 133 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YCR006CP25350 157 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B PMT2P31382 759 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B DPH2P32461 534 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B TRS65P32893 560 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B PAD1P33751 242 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
YGR109W-BYGR109W-B YBL055CP34220 418 aaPredicted RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B MRPL4P36517 319 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B LSM1P47017 172 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B YDR415CQ04033 374 aaPredicted RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B YMR253CQ04835 414 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B RDR1Q08904 546 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B ATP14Q12349 124 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B ARP6Q12509 438 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B NOT5Q12514 560 aaPredicted RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B TY3B-IQ7LHG5 1498 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B YEL009C-AA0A023PZF2 135 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B ARG4P04076 463 aaPredicted RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B BCY1P07278 416 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B RPL19AP0CX82 189 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B RPL19BP0CX83 189 aaPredicted RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B MAS1P10507 462 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B MRS3P10566 314 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 88.5 ms