RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W MSP1P28737 362 aa2.52□□□□□ -2.01
LOC1YFR001W FAA1P30624 700 aaKnown RBP2.52□□□□□ -2.01
LOC1YFR001W LDS1P31379 325 aa2.52□□□□□ -2.01
LOC1YFR001W MSK1P32048 576 aa2.52□□□□□ -2.01
LOC1YFR001W ZUO1P32527 433 aaKnown RBP2.52□□□□□ -2.01
LOC1YFR001W PDC2P32896 925 aa2.52□□□□□ -2.01
LOC1YFR001W VAM7P32912 316 aa2.52□□□□□ -2.01
LOC1YFR001W BMT2P38278 337 aa2.52□□□□□ -2.01
LOC1YFR001W GDT1P38301 280 aaPredicted RBP2.52□□□□□ -2.01
LOC1YFR001W PEX22P39718 180 aa2.52□□□□□ -2.01
LOC1YFR001W YDR115WQ04598 105 aa2.52□□□□□ -2.01
LOC1YFR001W PIN3Q06449 215 aa2.52□□□□□ -2.01
LOC1YFR001W HIF1Q12373 385 aa2.52□□□□□ -2.01
LOC1YFR001W DET1Q99288 334 aaKnown RBP2.52□□□□□ -2.01
LOC1YFR001W HSP82P02829 709 aaKnown RBP2.51□□□□□ -2.01
LOC1YFR001W UBA1P22515 1024 aaKnown RBP2.51□□□□□ -2.01
LOC1YFR001W DPH2P32461 534 aa2.51□□□□□ -2.01
LOC1YFR001W LCP5P40079 357 aaPredicted RBP2.51□□□□□ -2.01
LOC1YFR001W SEC9P40357 651 aa2.51□□□□□ -2.01
LOC1YFR001W FLC3P53121 802 aa2.51□□□□□ -2.01
LOC1YFR001W CWC22P53333 577 aaKnown RBP2.51□□□□□ -2.01
LOC1YFR001W EOS1P53938 366 aa2.51□□□□□ -2.01
LOC1YFR001W RCF1Q03713 159 aa2.51□□□□□ -2.01
LOC1YFR001W AIM33Q04516 312 aa2.51□□□□□ -2.01
LOC1YFR001W YOR376WQ08900 122 aa2.51□□□□□ -2.01
LOC1YFR001W TFB5Q3E7C1 72 aaPredicted RBP2.51□□□□□ -2.01
LOC1YFR001W TPI1P00942 248 aaKnown RBP2.5□□□□□ -2.01
LOC1YFR001W RPS16AP0CX51 143 aaKnown RBP2.5□□□□□ -2.01
LOC1YFR001W RPS16BP0CX52 143 aaKnown RBP2.5□□□□□ -2.01
LOC1YFR001W UNG1P12887 359 aa2.5□□□□□ -2.01
LOC1YFR001W YKR015CP36111 568 aa2.5□□□□□ -2.01
LOC1YFR001W DAD2P36162 133 aa2.5□□□□□ -2.01
LOC1YFR001W CHL4P38907 458 aa2.5□□□□□ -2.01
LOC1YFR001W SNL1P40548 159 aa2.5□□□□□ -2.01
LOC1YFR001W YNR068CP53754 272 aa2.5□□□□□ -2.01
LOC1YFR001W APJ1P53940 528 aa2.5□□□□□ -2.01
LOC1YFR001W UTP6Q02354 440 aaKnown RBP2.5□□□□□ -2.01
LOC1YFR001W GAS2Q06135 555 aa2.5□□□□□ -2.01
LOC1YFR001W IES4Q08561 116 aa2.5□□□□□ -2.01
LOC1YFR001W FRE6Q12473 712 aa2.5□□□□□ -2.01
LOC1YFR001W SFG1Q12507 346 aa2.5□□□□□ -2.01
LOC1YFR001W FSH3Q99369 266 aa2.5□□□□□ -2.01
LOC1YFR001W ASP3-2P0CX77 362 aa2.49□□□□□ -2.01
LOC1YFR001W ASP3-3P0CX78 362 aa2.49□□□□□ -2.01
LOC1YFR001W ASP3-4P0CX79 362 aa2.49□□□□□ -2.01
LOC1YFR001W ASP3-1P0CZ17 362 aa2.49□□□□□ -2.01
LOC1YFR001W FAR1P21268 830 aa2.49□□□□□ -2.01
LOC1YFR001W PMT2P31382 759 aa2.49□□□□□ -2.01
LOC1YFR001W COS9P36034 407 aa2.49□□□□□ -2.01
LOC1YFR001W ADH5P38113 351 aaKnown RBP2.49□□□□□ -2.01
LOC1YFR001W SMP1P38128 452 aa2.49□□□□□ -2.01
LOC1YFR001W YBR241CP38142 488 aa2.49□□□□□ -2.01
LOC1YFR001W YHR182WP38870 785 aa2.49□□□□□ -2.01
LOC1YFR001W YFL012WP43580 148 aa2.49□□□□□ -2.01
LOC1YFR001W MPS2P53159 387 aa2.49□□□□□ -2.01
LOC1YFR001W CDH1P53197 566 aa2.49□□□□□ -2.01
LOC1YFR001W YGR015CP53208 328 aa2.49□□□□□ -2.01
LOC1YFR001W YPL107WQ02873 248 aa2.49□□□□□ -2.01
LOC1YFR001W YOL075CQ08234 1294 aa2.49□□□□□ -2.01
LOC1YFR001W AIM45Q12480 344 aaKnown RBP2.49□□□□□ -2.01
LOC1YFR001W PUT4P15380 627 aa2.48□□□□□ -2.01
LOC1YFR001W MIR1P23641 311 aaKnown RBP2.48□□□□□ -2.01
LOC1YFR001W GRR1P24814 1151 aa2.48□□□□□ -2.01
LOC1YFR001W RDS1P25611 832 aa2.48□□□□□ -2.01
LOC1YFR001W SHE1P38200 338 aa2.48□□□□□ -2.01
LOC1YFR001W SLX1P38324 304 aa2.48□□□□□ -2.01
LOC1YFR001W AIM23P47015 356 aa2.48□□□□□ -2.01
LOC1YFR001W YJR030CP47101 745 aa2.48□□□□□ -2.01
LOC1YFR001W YJR054WP47114 497 aa2.48□□□□□ -2.01
LOC1YFR001W ATP22P50273 684 aaPredicted RBP2.48□□□□□ -2.01
LOC1YFR001W BIO3P50277 480 aa2.48□□□□□ -2.01
LOC1YFR001W RNH201P53942 307 aa2.48□□□□□ -2.01
LOC1YFR001W SLT2Q00772 484 aa2.48□□□□□ -2.01
LOC1YFR001W SRO7Q12038 1033 aa2.48□□□□□ -2.01
LOC1YFR001W SLM3Q12093 417 aa2.48□□□□□ -2.01
LOC1YFR001W LDB17Q12342 491 aa2.48□□□□□ -2.01
LOC1YFR001W YOR012WQ12351 137 aa2.48□□□□□ -2.01
LOC1YFR001W RAX2Q12465 1220 aa2.48□□□□□ -2.01
LOC1YFR001W UBA3Q99344 299 aa2.48□□□□□ -2.01
LOC1YFR001W RPS14AP06367 137 aaKnown RBP2.47□□□□□ -2.01
LOC1YFR001W THR4P16120 514 aaKnown RBP2.47□□□□□ -2.01
LOC1YFR001W DTR1P38125 572 aa2.47□□□□□ -2.01
LOC1YFR001W YPT35P38815 214 aaKnown RBP2.47□□□□□ -2.01
LOC1YFR001W RPS14BP39516 138 aaKnown RBP2.47□□□□□ -2.01
LOC1YFR001W VEL1P53058 206 aa2.47□□□□□ -2.01
LOC1YFR001W LST7P53237 242 aa2.47□□□□□ -2.01
LOC1YFR001W RMI1Q02685 241 aa2.47□□□□□ -2.01
LOC1YFR001W TIR4Q12218 487 aaPredicted RBP2.47□□□□□ -2.01
LOC1YFR001W YOL085CQ99345 113 aa2.47□□□□□ -2.01
LOC1YFR001W CKI1P20485 582 aa2.46□□□□□ -2.02
LOC1YFR001W EPT1P22140 391 aa2.46□□□□□ -2.02
LOC1YFR001W PTK1P36002 662 aaPredicted RBP2.46□□□□□ -2.02
LOC1YFR001W SHE3P38272 425 aaKnown RBP2.46□□□□□ -2.02
LOC1YFR001W ATG7P38862 630 aa2.46□□□□□ -2.02
LOC1YFR001W YER184CP39961 794 aa2.46□□□□□ -2.02
LOC1YFR001W RPA34P47006 233 aaPredicted RBP2.46□□□□□ -2.02
LOC1YFR001W TRM82Q03774 444 aa2.46□□□□□ -2.02
LOC1YFR001W SMP3Q04174 516 aa2.46□□□□□ -2.02
LOC1YFR001W FRE8Q12209 686 aa2.46□□□□□ -2.02
LOC1YFR001W MAS1P10507 462 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms