RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 YLR177WQ06251 628 aa3.37□□□□□ -1.87
snR78snR78 RPS18AP0CX55 146 aaKnown RBP3.36□□□□□ -1.87
snR78snR78 RPS18BP0CX56 146 aaPredicted RBP3.36□□□□□ -1.87
snR78snR78 SRB7P47822 140 aa3.36□□□□□ -1.87
snR78snR78 SEH1P53011 349 aaKnown RBP3.36□□□□□ -1.87
snR78snR78 PRP38Q00723 242 aaPredicted RBP3.36□□□□□ -1.87
snR78snR78 YMR010WQ03687 405 aa3.36□□□□□ -1.87
snR78snR78 YDR341CQ05506 607 aaKnown RBP3.36□□□□□ -1.87
snR78snR78 OPI3P05375 206 aa3.35□□□□□ -1.87
snR78snR78 DOA1P36037 715 aa3.35□□□□□ -1.87
snR78snR78 FRT2P39734 528 aa3.35□□□□□ -1.87
snR78snR78 KEG1P43614 200 aa3.35□□□□□ -1.87
snR78snR78 TOS2P50078 622 aa3.35□□□□□ -1.87
snR78snR78 CLB1P24868 471 aa3.34□□□□□ -1.87
snR78snR78 JNM1P36224 373 aa3.34□□□□□ -1.87
snR78snR78 ECM34P38728 170 aa3.34□□□□□ -1.87
snR78snR78 COQ5P49017 307 aa3.34□□□□□ -1.87
snR78snR78 RRN9P53437 365 aa3.34□□□□□ -1.87
snR78snR78 NSE1Q07913 336 aa3.34□□□□□ -1.87
snR78snR78 RNH203Q12338 110 aa3.34□□□□□ -1.87
snR78snR78 MEX67Q99257 599 aaKnown RBP3.34□□□□□ -1.87
snR78snR78 ARF1P11076 181 aaKnown RBP3.33□□□□□ -1.88
snR78snR78 CPR2P23285 205 aa3.33□□□□□ -1.88
snR78snR78 FAD1P38913 306 aa3.33□□□□□ -1.88
snR78snR78 FHL1P39521 936 aa3.33□□□□□ -1.88
snR78snR78 TCB2P48231 1178 aa3.33□□□□□ -1.88
snR78snR78 DIA1P54005 336 aa3.33□□□□□ -1.88
snR78snR78 PRP3Q03338 469 aaPredicted RBP3.33□□□□□ -1.88
snR78snR78 YLR456WQ06199 204 aa3.33□□□□□ -1.88
snR78snR78 ECM7Q06200 448 aa3.33□□□□□ -1.88
snR78snR78 LDB17Q12342 491 aa3.33□□□□□ -1.88
snR78snR78 TOA1P32773 286 aa3.32□□□□□ -1.88
snR78snR78 SMP1P38128 452 aa3.32□□□□□ -1.88
snR78snR78 VAC7P53950 1165 aa3.32□□□□□ -1.88
snR78snR78 SRO7Q12038 1033 aa3.32□□□□□ -1.88
snR78snR78 SFM1Q12314 213 aa3.32□□□□□ -1.88
snR78snR78 RPL12AP0CX53 165 aaKnown RBP3.31□□□□□ -1.88
snR78snR78 RPL12BP0CX54 165 aa3.31□□□□□ -1.88
snR78snR78 EPT1P22140 391 aa3.31□□□□□ -1.88
snR78snR78 NRP1P32770 719 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
snR78snR78 CYM1P32898 989 aa3.31□□□□□ -1.88
snR78snR78 QDR3P38227 689 aa3.31□□□□□ -1.88
snR78snR78 YIR035CP40579 254 aa3.31□□□□□ -1.88
snR78snR78 ZIM17P42844 174 aa3.31□□□□□ -1.88
snR78snR78 RCK2P38623 610 aa3.3□□□□□ -1.88
snR78snR78 HEM14P40012 539 aa3.3□□□□□ -1.88
snR78snR78 PMT5P52867 743 aa3.3□□□□□ -1.88
snR78snR78 ASA1Q06822 443 aa3.3□□□□□ -1.88
snR78snR78 PDX1P16451 410 aa3.29□□□□□ -1.88
snR78snR78 CHA1P25379 360 aaKnown RBP3.29□□□□□ -1.88
snR78snR78 PHO91P27514 894 aa3.29□□□□□ -1.88
snR78snR78 ZIP1P31111 875 aa3.29□□□□□ -1.88
snR78snR78 YBR241CP38142 488 aa3.29□□□□□ -1.88
snR78snR78 CIN2P46670 268 aa3.29□□□□□ -1.88
snR78snR78 HST4P53688 370 aa3.29□□□□□ -1.88
snR78snR78 SUB1P54000 292 aaKnown RBP3.29□□□□□ -1.88
snR78snR78 FSH2Q05015 223 aa3.29□□□□□ -1.88
snR78snR78 APC2Q12440 853 aa3.29□□□□□ -1.88
snR78snR78 PDE2P06776 526 aa3.28□□□□□ -1.88
snR78snR78 LDS1P31379 325 aa3.28□□□□□ -1.88
snR78snR78 ABM1P47146 123 aa3.28□□□□□ -1.88
snR78snR78 ROG1P53118 685 aa3.28□□□□□ -1.88
snR78snR78 YGR111WP53265 400 aa3.28□□□□□ -1.88
snR78snR78 RNH201P53942 307 aa3.28□□□□□ -1.88
snR78snR78 URC2Q04411 772 aa3.28□□□□□ -1.88
snR78snR78 YOR376WQ08900 122 aa3.28□□□□□ -1.88
snR78snR78 YOL085CQ99345 113 aa3.28□□□□□ -1.88
snR78snR78 RPC53P25441 422 aa3.27□□□□□ -1.89
snR78snR78 MSP1P28737 362 aa3.27□□□□□ -1.89
snR78snR78 ANP1P32629 500 aa3.27□□□□□ -1.89
snR78snR78 SEC27P41811 889 aaKnown RBP3.27□□□□□ -1.89
snR78snR78 CPR7P47103 393 aa3.27□□□□□ -1.89
snR78snR78 ERO1Q03103 563 aa3.27□□□□□ -1.89
snR78snR78 RMT2Q03305 412 aa3.27□□□□□ -1.89
snR78snR78 DDC1Q08949 612 aa3.27□□□□□ -1.89
snR78snR78 HIF1Q12373 385 aa3.27□□□□□ -1.89
snR78snR78 DBF4P32325 704 aa3.26□□□□□ -1.89
snR78snR78 TOA2P32774 122 aa3.26□□□□□ -1.89
snR78snR78 YSC83P32792 385 aa3.26□□□□□ -1.89
snR78snR78 PAC11P40960 533 aa3.26□□□□□ -1.89
snR78snR78 UAF30Q08747 228 aa3.26□□□□□ -1.89
snR78snR78 NAB3P38996 802 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
snR78snR78 CWC22P53333 577 aaKnown RBP3.25□□□□□ -1.89
snR78snR78 LDS2Q08218 356 aa3.25□□□□□ -1.89
snR78snR78 DCI1Q08558 271 aa3.25□□□□□ -1.89
snR78snR78 HEM4P06174 275 aa3.24□□□□□ -1.89
snR78snR78 UNG1P12887 359 aa3.24□□□□□ -1.89
snR78snR78 AGA2P32781 87 aa3.24□□□□□ -1.89
snR78snR78 COS9P36034 407 aa3.24□□□□□ -1.89
snR78snR78 RRT13P40042 185 aa3.24□□□□□ -1.89
snR78snR78 ASN2P49090 572 aaKnown RBP3.24□□□□□ -1.89
snR78snR78 BIO3P50277 480 aa3.24□□□□□ -1.89
snR78snR78 MRX8Q05473 314 aa3.24□□□□□ -1.89
snR78snR78 ATP16Q12165 160 aa3.24□□□□□ -1.89
snR78snR78 AUS1Q08409 1394 aa3.24□□□□□ -1.89
snR78snR78 MDH1P17505 334 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
snR78snR78 RPL16AP26784 199 aaKnown RBP3.23□□□□□ -1.89
snR78snR78 SHE3P38272 425 aaKnown RBP3.23□□□□□ -1.89
snR78snR78 RPN14P53196 417 aa3.23□□□□□ -1.89
snR78snR78 RMI1Q02685 241 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms