RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 HSP32Q08992 237 aa-0.93□□□□□ -2.56
snR47snR47 RTC5Q12108 567 aaKnown RBP-0.93□□□□□ -2.56
snR47snR47 RIP1P08067 215 aa-0.94□□□□□ -2.56
snR47snR47 SPB1P25582 841 aaPredicted RBP-0.94□□□□□ -2.56
snR47snR47 AFG1P32317 509 aa-0.94□□□□□ -2.56
snR47snR47 YKR045CP36138 183 aa-0.94□□□□□ -2.56
snR47snR47 CDH1P53197 566 aa-0.94□□□□□ -2.56
snR47snR47 REX2P54964 269 aaKnown RBP-0.94□□□□□ -2.56
snR47snR47 BUR2Q05949 395 aa-0.94□□□□□ -2.56
snR47snR47 HMS1Q12398 434 aa-0.94□□□□□ -2.56
snR47snR47 FOB1O13329 566 aa-0.95□□□□□ -2.56
snR47snR47 VAR1P02381 398 aa-0.95□□□□□ -2.56
snR47snR47 RAD14P28519 371 aa-0.95□□□□□ -2.56
snR47snR47 PTP2P29461 750 aa-0.95□□□□□ -2.56
snR47snR47 MRS6P32864 603 aaKnown RBP-0.95□□□□□ -2.56
snR47snR47 SHC1P39000 512 aa-0.95□□□□□ -2.56
snR47snR47 VTC2P43585 828 aa-0.95□□□□□ -2.56
snR47snR47 YGR149WP48236 432 aa-0.95□□□□□ -2.56
snR47snR47 YSA1Q01976 231 aa-0.95□□□□□ -2.56
snR47snR47 GIP3Q03016 1276 aa-0.95□□□□□ -2.56
snR47snR47 BLS1Q06071 122 aa-0.95□□□□□ -2.56
snR47snR47 SUE1Q06524 206 aa-0.95□□□□□ -2.56
snR47snR47 ATP16Q12165 160 aa-0.95□□□□□ -2.56
snR47snR47 YDR018CQ12185 396 aa-0.95□□□□□ -2.56
snR47snR47 SEC39Q12745 709 aa-0.95□□□□□ -2.56
snR47snR47 SGA1P08019 549 aa-0.96□□□□□ -2.56
snR47snR47 RPL19AP0CX82 189 aaKnown RBP-0.96□□□□□ -2.56
snR47snR47 RPL19BP0CX83 189 aaPredicted RBP-0.96□□□□□ -2.56
snR47snR47 HOM3P10869 527 aa-0.96□□□□□ -2.56
snR47snR47 IDH2P28241 369 aaKnown RBP-0.96□□□□□ -2.56
snR47snR47 CAB3P36076 571 aa-0.96□□□□□ -2.56
snR47snR47 ACA1P39970 489 aa-0.96□□□□□ -2.56
snR47snR47 TOS3P43637 560 aa-0.96□□□□□ -2.56
snR47snR47 MEP3P53390 489 aa-0.96□□□□□ -2.56
snR47snR47 UTP15Q04305 513 aaKnown RBP-0.96□□□□□ -2.56
snR47snR47 FSH2Q05015 223 aa-0.96□□□□□ -2.56
snR47snR47 ATG34Q12292 412 aa-0.96□□□□□ -2.56
snR47snR47 EMC6Q12431 108 aa-0.96□□□□□ -2.56
snR47snR47 PCL9Q12477 304 aa-0.96□□□□□ -2.56
snR47snR47 YPL247CQ12523 523 aa-0.96□□□□□ -2.56
snR47snR47 SSM4P40318 1319 aa-0.96□□□□□ -2.56
snR47snR47 GRX4P32642 244 aa-0.97□□□□□ -2.56
snR47snR47 APE3P37302 537 aaKnown RBP-0.97□□□□□ -2.56
snR47snR47 ECM8P38246 354 aa-0.97□□□□□ -2.56
snR47snR47 SGN1P40561 250 aaKnown RBP RIP-Chip data-0.97□□□□□ -2.56not detected
snR47snR47 SDS23P53172 527 aa-0.97□□□□□ -2.56
snR47snR47 ROY1Q04847 553 aa-0.97□□□□□ -2.56
snR47snR47 YOL019WQ08157 551 aa-0.97□□□□□ -2.56
snR47snR47 SLH1P53327 1967 aaKnown RBP-0.97□□□□□ -2.57
snR47snR47 PAB1P04147 577 aaKnown RBP RIP-Chip data-0.98□□□□□ -2.57not detected
snR47snR47 GAL80P04387 435 aa-0.98□□□□□ -2.57
snR47snR47 GPH1P06738 902 aaKnown RBP-0.98□□□□□ -2.57
snR47snR47 YGL010WP25338 174 aa-0.98□□□□□ -2.57
snR47snR47 COS9P36034 407 aa-0.98□□□□□ -2.57
snR47snR47 ATP3P38077 311 aaKnown RBP-0.98□□□□□ -2.57
snR47snR47 RRG9P40156 214 aa-0.98□□□□□ -2.57
snR47snR47 PMT5P52867 743 aa-0.98□□□□□ -2.57
snR47snR47 RRP46P53256 223 aaPredicted RBP-0.98□□□□□ -2.57
snR47snR47 COS6P53344 381 aa-0.98□□□□□ -2.57
snR47snR47 URH1Q04179 340 aa-0.98□□□□□ -2.57
snR47snR47 MDM30Q05930 598 aa-0.98□□□□□ -2.57
snR47snR47 IES3Q12345 250 aa-0.98□□□□□ -2.57
snR47snR47 AFI1Q99222 893 aa-0.98□□□□□ -2.57
snR47snR47 SSC1P0CS90 654 aaKnown RBP-0.99□□□□□ -2.57
snR47snR47 FPR1P20081 114 aaKnown RBP-0.99□□□□□ -2.57
snR47snR47 ATG15P25641 520 aa-0.99□□□□□ -2.57
snR47snR47 YBR056WP38081 501 aa-0.99□□□□□ -2.57
snR47snR47 IST2P38250 946 aa-0.99□□□□□ -2.57
snR47snR47 YBR220CP38318 560 aa-0.99□□□□□ -2.57
snR47snR47 VHC1P38329 1120 aa-0.99□□□□□ -2.57
snR47snR47 CIN2P46670 268 aa-0.99□□□□□ -2.57
snR47snR47 LSG1P53145 640 aaKnown RBP-0.99□□□□□ -2.57
snR47snR47 FOL1P53848 824 aa-0.99□□□□□ -2.57
snR47snR47 GIR2Q03768 265 aaPredicted RBP-0.99□□□□□ -2.57
snR47snR47 YMR244WQ04018 355 aa-0.99□□□□□ -2.57
snR47snR47 YJR112W-AQ3E743 109 aa-0.99□□□□□ -2.57
snR47snR47 POM152P39685 1337 aa-0.99□□□□□ -2.57
snR47snR47 SPS4P09937 338 aa-1□□□□□ -2.57
snR47snR47 PMT1P33775 817 aa-1□□□□□ -2.57
snR47snR47 YOR062CP36025 268 aa-1□□□□□ -2.57
snR47snR47 EFM1P38732 585 aa-1□□□□□ -2.57
snR47snR47 PIR5P46999 287 aa-1□□□□□ -2.57
snR47snR47 PIB2P53191 635 aa-1□□□□□ -2.57
snR47snR47 RTS3P53289 263 aa-1□□□□□ -2.57
snR47snR47 BNI5P53890 448 aaKnown RBP-1□□□□□ -2.57
snR47snR47 NOP58Q12499 511 aaKnown RBP-1□□□□□ -2.57
snR47snR47 CYR1P08678 2026 aaKnown RBP-1□□□□□ -2.57
snR47snR47 URA4P20051 364 aa-1.01□□□□□ -2.57
snR47snR47 GEX1P25596 615 aa-1.01□□□□□ -2.57
snR47snR47 BRF1P29056 596 aa-1.01□□□□□ -2.57
snR47snR47 SOR1P35497 357 aaKnown RBP-1.01□□□□□ -2.57
snR47snR47 YBL029WP38201 376 aa-1.01□□□□□ -2.57
snR47snR47 GPI16P38875 610 aa-1.01□□□□□ -2.57
snR47snR47 PEP8P40335 379 aa-1.01□□□□□ -2.57
snR47snR47 EPL1P43572 832 aa-1.01□□□□□ -2.57
snR47snR47 MIC19P43594 170 aa-1.01□□□□□ -2.57
snR47snR47 PHO86P46956 311 aa-1.01□□□□□ -2.57
snR47snR47 CAX4P53223 239 aa-1.01□□□□□ -2.57
snR47snR47 SLT2Q00772 484 aa-1.01□□□□□ -2.57
snR47snR47 NGL3Q03210 505 aa-1.01□□□□□ -2.57
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms