RNA–Protein interactions for RNA: YPR158C-D

YPR158C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YPR158C-D, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR158C-D	YPR158C-D	PTC1	P35182	281 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	SDH4	P37298	181 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	RTC2	P38279	296 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	RIM8	P53179	542 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	TIM13	P53299	105 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	GND2	P53319	492 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	YNR068C	P53754	272 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	TRS23	Q03784	219 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	CDC8	P00572	216 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	MTC2	P34246	357 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	SIM1	P40472	476 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	TDA10	P42938	290 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	SKP1	P52286	194 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	RIM9	Q04734	239 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	FAP7	Q12055	197 aa	Predicted RBP	3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	HER1	Q12276	1246 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	SEC53	P07283	254 aa	Known RBP	3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	HEM13	P11353	328 aa	Known RBP	3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	DIT1	P21623	536 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	RTG1	P32607	177 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	AIM26	P32858	118 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	MRPL1	Q04599	285 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	SSQ1	Q05931	657 aa	Predicted RBP	3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	SWC7	Q06707	132 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	TMC1	Q08422	150 aa	Predicted RBP	3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	RDL2	Q08742	149 aa	Known RBP	3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	SFM1	Q12314	213 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	PEP4	P07267	405 aa	Known RBP	3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	TRK2	P28584	889 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	CCZ1	P38273	704 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	GNP1	P48813	663 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	SNF12	P53628	566 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	TRS31	Q03337	283 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	YDR131C	Q03899	556 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	NNT1	Q05874	261 aa		3.18	□□□□□ -1.9
YPR158C-D	YPR158C-D	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
YPR158C-D	YPR158C-D	RPL3	P14126	387 aa	Known RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	SYP1	P25623	870 aa	Known RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
YPR158C-D	YPR158C-D	IES6	P32617	166 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	CAT2	P32796	670 aa	Known RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	MNS1	P32906	549 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	MRT4	P33201	236 aa	Known RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	MMS21	P38632	267 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	LOC1	P43586	204 aa	Predicted RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	CTK2	P46962	323 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	OAZ1	Q02803	292 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	RCE1	Q03530	315 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	URH1	Q04179	340 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	ENB1	Q08299	606 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	PRM3	Q08931	133 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	GPM3	Q12326	303 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	TY4B-H	P0C2J7	1802 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	TY4B-J	P47024	1803 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	RPL22A	P05749	121 aa	Known RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	YKR015C	P36111	568 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
YPR158C-D	YPR158C-D	COS6	P53344	381 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	ERV25	P54837	211 aa	Known RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	TAF11	Q04226	346 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	DFG5	Q05031	458 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	YCL012C	Q8J0M4	134 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	FLO9	P39712	1322 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	YAL064W-B	O13512	126 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	YAK1	P14680	807 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	RFA2	P26754	273 aa	Known RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	ITR1	P30605	584 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	VMA22	P38784	181 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	AIM46	P38885	310 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	APQ12	P40532	138 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	YNL320W	P42840	284 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	NAS6	P50086	228 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	HST2	P53686	357 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	MRPL19	P53875	158 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	SAM50	P53969	484 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	YMR310C	Q04867	317 aa	Predicted RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	SMF3	Q12078	473 aa	Predicted RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	MATALPHA2	P0CY08	210 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	HMLALPHA2	P0CY09	210 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	YER130C	P39959	443 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	PFK26	P40433	827 aa	Known RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	LYS12	P40495	371 aa	Known RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	AMA1	P50082	593 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	YGR237C	P50089	785 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	ERG26	P53199	349 aa	Known RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	HAS1	Q03532	505 aa	Known RBP	3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	ROT1	Q03691	256 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	PLM2	Q04383	521 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	TCO89	Q08921	799 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	ATG31	Q12421	196 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	FSH3	Q99369	266 aa		3.17	□□□□□ -1.9
YPR158C-D	YPR158C-D	SLM5	P25345	492 aa	Known RBP	3.16	□□□□□ -1.9
YPR158C-D	YPR158C-D	PDB1	P32473	366 aa	Known RBP	3.16	□□□□□ -1.9
YPR158C-D	YPR158C-D	TOD6	P34219	525 aa		3.16	□□□□□ -1.9
YPR158C-D	YPR158C-D	FZO1	P38297	855 aa		3.16	□□□□□ -1.9
YPR158C-D	YPR158C-D	RBG1	P39729	369 aa		3.16	□□□□□ -1.9
YPR158C-D	YPR158C-D	OTU1	P43558	301 aa		3.16	□□□□□ -1.9
YPR158C-D	YPR158C-D	YFR035C	P43608	114 aa		3.16	□□□□□ -1.9
YPR158C-D	YPR158C-D	ABZ2	Q03266	374 aa		3.16	□□□□□ -1.9
YPR158C-D	YPR158C-D	MSC3	Q05812	728 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 268.4 ms