RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeast

Gene PBA1, Length 831 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBA1	YLR199C	RGS2	Q99188	309 aa		3.2	□□□□□ -1.9
PBA1	YLR199C	EDE1	P34216	1381 aa		3.2	□□□□□ -1.9
PBA1	YLR199C	CFT1	Q06632	1357 aa	Known RBP	3.2	□□□□□ -1.9
PBA1	YLR199C	ARF1	P11076	181 aa	Known RBP	3.19	□□□□□ -1.9
PBA1	YLR199C	CLN3	P13365	580 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	CSM1	P25651	190 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	PRO3	P32263	286 aa	Known RBP	3.19	□□□□□ -1.9
PBA1	YLR199C	ASF2	P32448	525 aa	Predicted RBP	3.19	□□□□□ -1.9
PBA1	YLR199C	YKR015C	P36111	568 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	SIP3	P38717	1229 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	BTT1	P40314	149 aa	Predicted RBP	3.19	□□□□□ -1.9
PBA1	YLR199C	YJL070C	P40361	888 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	YJL118W	P47022	219 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	TOS2	P50078	622 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	PHB2	P50085	310 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	PGA2	P53903	129 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	NUP100	Q02629	959 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	FMP30	Q02883	468 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	SLD5	Q03406	294 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	COX20	Q04935	205 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	BUR2	Q05949	395 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	CTS2	Q06350	511 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	MDM36	Q06820	579 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	TSR1	Q07381	788 aa	Known RBP	3.19	□□□□□ -1.9
PBA1	YLR199C	SHS1	Q07657	551 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	YOL075C	Q08234	1294 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	BSC6	Q08280	497 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	PFA4	Q12006	378 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	PRP46	Q12417	451 aa	Predicted RBP	3.19	□□□□□ -1.9
PBA1	YLR199C	YPR1	Q12458	312 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	TRM3	Q07527	1436 aa		3.19	□□□□□ -1.9
PBA1	YLR199C	GAL4	P04386	881 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	CDC36	P06100	191 aa	Predicted RBP	3.18	□□□□□ -1.9
PBA1	YLR199C	MSF1	P08425	469 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	MAS2	P11914	482 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	POL30	P15873	258 aa	Known RBP	3.18	□□□□□ -1.9
PBA1	YLR199C	YCR007C	P25354	239 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	YCR016W	P25617	290 aa	Known RBP	3.18	□□□□□ -1.9
PBA1	YLR199C	RPL5	P26321	297 aa	Known RBP	3.18	□□□□□ -1.9
PBA1	YLR199C	CWP1	P28319	239 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	EFB1	P32471	206 aa	Known RBP	3.18	□□□□□ -1.9
PBA1	YLR199C	KRE6	P32486	720 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	ARC19	P33204	171 aa	Known RBP	3.18	□□□□□ -1.9
PBA1	YLR199C	YKL097C	P34245	136 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	DOA1	P36037	715 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	YKL162C	P36052	402 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	SBE22	P38814	852 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	LYS1	P38998	373 aa	RIP-Chip data	3.18	□□□□□ -1.9	not detected
PBA1	YLR199C	DSE1	P40077	573 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	VRG4	P40107	337 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	OTU1	P43558	301 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	YGR168C	P53293	376 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	SPP2	Q02521	185 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	GTO3	Q04806	366 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	GLO2	Q05584	274 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	SSQ1	Q05931	657 aa	Predicted RBP	3.18	□□□□□ -1.9
PBA1	YLR199C	BSP1	Q06604	576 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	SKI7	Q08491	747 aa	Predicted RBP	3.18	□□□□□ -1.9
PBA1	YLR199C	ORT1	Q12375	292 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	YLR111W	Q12528	110 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	UBA3	Q99344	299 aa		3.18	□□□□□ -1.9
PBA1	YLR199C	RPO21	P04050	1733 aa	Known RBP	3.17	□□□□□ -1.9
PBA1	YLR199C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
PBA1	YLR199C	HEM2	P05373	342 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	PRP16	P15938	1071 aa	Predicted RBP	3.17	□□□□□ -1.9
PBA1	YLR199C	MXR2	P25566	168 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	ITR1	P30605	584 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	ZUO1	P32527	433 aa	Known RBP	3.17	□□□□□ -1.9
PBA1	YLR199C	TOA2	P32774	122 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	MGM101	P32787	269 aa	Known RBP	3.17	□□□□□ -1.9
PBA1	YLR199C	SKG6	P32900	734 aa	Predicted RBP	3.17	□□□□□ -1.9
PBA1	YLR199C	MYO3	P36006	1272 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	YKL071W	P36086	256 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	YCR041W	P37265	110 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	YBR056W	P38081	501 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	RIM2	P38127	377 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	APD1	P38281	316 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	LEU5	P38702	357 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	PRM9	P39551	298 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	ISC1	P40015	477 aa	Known RBP	3.17	□□□□□ -1.9
PBA1	YLR199C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	RIP-Chip
PBA1	YLR199C	YIP1	P53039	248 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	KTR6	P54070	446 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	MRPS17	Q03246	237 aa	Predicted RBP	3.17	□□□□□ -1.9
PBA1	YLR199C	NAT4	Q04751	285 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	YMR034C	Q05131	434 aa	Predicted RBP	3.17	□□□□□ -1.9
PBA1	YLR199C	TPO3	Q06451	622 aa		3.17	□□□□□ -1.9
PBA1	YLR199C	YOR1	P53049	1477 aa		3.16	□□□□□ -1.9
PBA1	YLR199C	JIP3	O13555	125 aa		3.16	□□□□□ -1.9
PBA1	YLR199C	TPK3	P05986	398 aa		3.16	□□□□□ -1.9
PBA1	YLR199C	RAD7	P06779	565 aa		3.16	□□□□□ -1.9
PBA1	YLR199C	FRS2	P15625	503 aa	Known RBP	3.16	□□□□□ -1.9
PBA1	YLR199C	SPO12	P17123	173 aa		3.16	□□□□□ -1.9
PBA1	YLR199C	RVS161	P25343	265 aa	Known RBP	3.16	□□□□□ -1.9
PBA1	YLR199C	COX13	P32799	129 aa		3.16	□□□□□ -1.9
PBA1	YLR199C	CYM1	P32898	989 aa		3.16	□□□□□ -1.9
PBA1	YLR199C	MRPS5	P33759	307 aa		3.16	□□□□□ -1.9
PBA1	YLR199C	YAR1	P46683	200 aa		3.16	□□□□□ -1.9
PBA1	YLR199C	YGR117C	P53270	476 aa		3.16	□□□□□ -1.9
PBA1	YLR199C	FRE4	P53746	719 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms