RNA–Protein interactions for RNA: YIL071C

PCI8, Transcript of Possible shared subunit of Cop9 signalosome (CSN) and eIF3, yeast

Gene PCI8, Length 1,335 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCI8	YIL071C	LAC1	P28496	418 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	CYS4	P32582	507 aa	Known RBP	3.12	□□□□□ -1.91
PCI8	YIL071C	RPS1A	P33442	255 aa	Known RBP	3.12	□□□□□ -1.91
PCI8	YIL071C	YKR015C	P36111	568 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	FAD1	P38913	306 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	TIM17	P39515	158 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	PUG1	P40100	303 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	RGI2	P40188	164 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	ALG8	P40351	577 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	UFE1	P41834	346 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	PRP24	P49960	444 aa	Known RBP	3.12	□□□□□ -1.91
PCI8	YIL071C	EFM5	P53200	248 aa	Known RBP	3.12	□□□□□ -1.91
PCI8	YIL071C	SHY1	P53266	389 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	SPR6	Q01684	191 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	TOF2	Q02208	771 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	NHP10	Q03435	203 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	GMC2	Q06201	188 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	TSR2	Q06672	205 aa	Known RBP	3.12	□□□□□ -1.91
PCI8	YIL071C	VAM6	Q07468	1049 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	YLR012C	Q07927	99 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	SGT1	Q08446	395 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	UAF30	Q08747	228 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	YPQ1	Q12010	308 aa		3.12	□□□□□ -1.91
PCI8	YIL071C	ARG81	P05085	880 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	BCY1	P07278	416 aa	Known RBP	3.11	□□□□□ -1.91
PCI8	YIL071C	MAS1	P10507	462 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	SCH9	P11792	824 aa	Known RBP	3.11	□□□□□ -1.91
PCI8	YIL071C	RBK1	P25332	333 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	CTR86	P25355	563 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	SGF29	P25554	259 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	SLC1	P33333	303 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	MRPL17	P36528	281 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	MRPL40	P36534	297 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	MAK5	P38112	773 aa	Predicted RBP	3.11	□□□□□ -1.91
PCI8	YIL071C	EFM1	P38732	585 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	GOS1	P38736	223 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	ARB1	P40024	610 aa	Known RBP	3.11	□□□□□ -1.91
PCI8	YIL071C	CAB2	P40506	365 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	GCD10	P41814	478 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	EMC2	P47133	292 aa	Known RBP	3.11	□□□□□ -1.91
PCI8	YIL071C	CLD1	P53264	445 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	YNL234W	P53857	426 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	YNL095C	P53932	642 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	TMA20	P89886	181 aa	Predicted RBP	3.11	□□□□□ -1.91
PCI8	YIL071C	PNG1	Q02890	363 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	YMR099C	Q03161	297 aa	Known RBP	3.11	□□□□□ -1.91
PCI8	YIL071C	PIR1	Q03178	341 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	YDR239C	Q03780	787 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	YDR415C	Q04033	374 aa	Predicted RBP	3.11	□□□□□ -1.91
PCI8	YIL071C	YDR124W	Q04608	324 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	LOT6	Q07923	191 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	YLR046C	Q12253	270 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	PEX11	Q12462	236 aa		3.11	□□□□□ -1.91
PCI8	YIL071C	THP2	O13539	261 aa	Known RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	CBP2	P03874	630 aa	Predicted RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	ARG3	P05150	338 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	MRP13	P12686	339 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	SEC63	P14906	663 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	MSS116	P15424	664 aa	Known RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	NCP1	P16603	691 aa	Known RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	DPB2	P24482	689 aa	Predicted RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	RAD51	P25454	400 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	GEX1	P25596	615 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	APE2	P32454	952 aa	Known RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	RPT5	P33297	434 aa	Known RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
PCI8	YIL071C	SGE1	P33335	543 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	TIP20	P33891	701 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	LHS1	P36016	881 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	GEX2	P36173	615 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	RIB1	P38066	345 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	UME6	P39001	836 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	NOP16	P40007	231 aa	Known RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	AVT6	P40074	448 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	BTT1	P40314	149 aa	Predicted RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	PAN6	P40459	309 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	AYR1	P40471	297 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	YRB2	P40517	327 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	IME4	P41833	600 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	YRB1	P41920	201 aa	Known RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	YPT32	P51996	222 aa	Known RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	PXR1	P53335	271 aa	Predicted RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	MEP3	P53390	489 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	FRE4	P53746	719 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	YNL143C	P53908	130 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	SED5	Q01590	340 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	YPL014W	Q02606	381 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	SMA1	Q02651	245 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	ATG21	Q02887	496 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	MMT1	Q03218	510 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	ECM11	Q04110	302 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	EMI1	Q04406	187 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	RTN1	Q04947	295 aa	Known RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	UTP21	Q06078	939 aa	Predicted RBP	3.1	□□□□□ -1.91
PCI8	YIL071C	GPI11	Q06636	219 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	AIM6	Q07716	390 aa		3.1	□□□□□ -1.91
PCI8	YIL071C	SEM1	O94742	89 aa		3.09	□□□□□ -1.91
PCI8	YIL071C	CDC31	P06704	161 aa	Known RBP	3.09	□□□□□ -1.91
PCI8	YIL071C	RAD7	P06779	565 aa		3.09	□□□□□ -1.91
PCI8	YIL071C	DST1	P07273	309 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms