RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W PCP1P53259 346 aa6.08□□□□□ -1.44
SNU71YGR013W GIM3P53900 129 aa6.08□□□□□ -1.44
SNU71YGR013W LGE1Q02796 332 aaKnown RBP6.08□□□□□ -1.44
SNU71YGR013W GPN3Q06543 272 aa6.08□□□□□ -1.44
SNU71YGR013W SSK1Q07084 712 aa6.08□□□□□ -1.44
SNU71YGR013W YRM1Q12340 786 aa6.08□□□□□ -1.44
SNU71YGR013W BUB3P26449 341 aa6.07□□□□□ -1.44
SNU71YGR013W ERG1P32476 496 aaKnown RBP6.07□□□□□ -1.44
SNU71YGR013W SHQ1P40486 507 aaPredicted RBP6.07□□□□□ -1.44
SNU71YGR013W GPI1P53306 609 aa6.07□□□□□ -1.44
SNU71YGR013W SMP3Q04174 516 aa6.07□□□□□ -1.44
SNU71YGR013W ARP10Q04549 284 aa6.07□□□□□ -1.44
SNU71YGR013W HIS4P00815 799 aaKnown RBP6.07□□□□□ -1.44
SNU71YGR013W KIN3P22209 435 aa6.07□□□□□ -1.44
SNU71YGR013W ICL1P28240 557 aaPredicted RBP6.07□□□□□ -1.44
SNU71YGR013W SBE22P38814 852 aa6.07□□□□□ -1.44
SNU71YGR013W BNA6P43619 295 aa6.07□□□□□ -1.44
SNU71YGR013W NUP100Q02629 959 aa6.07□□□□□ -1.44
SNU71YGR013W MMT1Q03218 510 aa6.07□□□□□ -1.44
SNU71YGR013W COQ11Q05892 277 aa6.07□□□□□ -1.44
SNU71YGR013W ASA1Q06822 443 aa6.07□□□□□ -1.44
SNU71YGR013W LDS2Q08218 356 aa6.07□□□□□ -1.44
SNU71YGR013W MSF1P08425 469 aa6.06□□□□□ -1.44
SNU71YGR013W GPI12P23797 304 aa6.06□□□□□ -1.44
SNU71YGR013W ZUO1P32527 433 aaKnown RBP6.06□□□□□ -1.44
SNU71YGR013W BMH2P34730 273 aaKnown RBP6.06□□□□□ -1.44
SNU71YGR013W LYS12P40495 371 aaKnown RBP6.06□□□□□ -1.44
SNU71YGR013W HMS2P47175 358 aa6.06□□□□□ -1.44
SNU71YGR013W CGR1P53188 120 aa6.06□□□□□ -1.44
SNU71YGR013W FMP30Q02883 468 aa6.06□□□□□ -1.44
SNU71YGR013W SLD5Q03406 294 aa6.06□□□□□ -1.44
SNU71YGR013W CTS2Q06350 511 aa6.06□□□□□ -1.44
SNU71YGR013W PFA4Q12006 378 aa6.06□□□□□ -1.44
SNU71YGR013W RPO41P13433 1351 aaKnown RBP6.05□□□□□ -1.44
SNU71YGR013W ARG4P04076 463 aaPredicted RBP6.05□□□□□ -1.44
SNU71YGR013W POL30P15873 258 aaKnown RBP6.05□□□□□ -1.44
SNU71YGR013W YMR134WP40207 237 aa6.05□□□□□ -1.44
SNU71YGR013W UTP25P40498 721 aaKnown RBP6.05□□□□□ -1.44
SNU71YGR013W YJL118WP47022 219 aa6.05□□□□□ -1.44
SNU71YGR013W PHB2P50085 310 aa6.05□□□□□ -1.44
SNU71YGR013W PXR1P53335 271 aaPredicted RBP6.05□□□□□ -1.44
SNU71YGR013W IVY1Q04934 453 aa6.05□□□□□ -1.44
SNU71YGR013W COX20Q04935 205 aa6.05□□□□□ -1.44
SNU71YGR013W ORM2Q06144 216 aa6.05□□□□□ -1.44
SNU71YGR013W MDM36Q06820 579 aa6.05□□□□□ -1.44
SNU71YGR013W BSC6Q08280 497 aa6.05□□□□□ -1.44
SNU71YGR013W PUS9Q12069 462 aa6.05□□□□□ -1.44
SNU71YGR013W ACF2Q12168 779 aa6.05□□□□□ -1.44
SNU71YGR013W APC2Q12440 853 aa6.05□□□□□ -1.44
SNU71YGR013W CDC23P16522 626 aa6.05□□□□□ -1.44
SNU71YGR013W MXR2P25566 168 aa6.05□□□□□ -1.44
SNU71YGR013W ASF2P32448 525 aaPredicted RBP6.05□□□□□ -1.44
SNU71YGR013W YKR015CP36111 568 aa6.05□□□□□ -1.44
SNU71YGR013W MMF1P40185 145 aaKnown RBP6.05□□□□□ -1.44
SNU71YGR013W STB4P50104 949 aa6.05□□□□□ -1.44
SNU71YGR013W PGA2P53903 129 aa6.05□□□□□ -1.44
SNU71YGR013W BUR2Q05949 395 aa6.05□□□□□ -1.44
SNU71YGR013W YLR111WQ12528 110 aa6.05□□□□□ -1.44
SNU71YGR013W RPP0P05317 312 aaKnown RBP6.04□□□□□ -1.44
SNU71YGR013W ARF1P11076 181 aaKnown RBP6.04□□□□□ -1.44
SNU71YGR013W CLN3P13365 580 aa6.04□□□□□ -1.44
SNU71YGR013W EFB1P32471 206 aaKnown RBP6.04□□□□□ -1.44
SNU71YGR013W YKL162CP36052 402 aa6.04□□□□□ -1.44
SNU71YGR013W YMR262WP38430 313 aa6.04□□□□□ -1.44
SNU71YGR013W LEU5P38702 357 aa6.04□□□□□ -1.44
SNU71YGR013W SIP3P38717 1229 aa6.04□□□□□ -1.44
SNU71YGR013W DSE1P40077 573 aa6.04□□□□□ -1.44
SNU71YGR013W SDS3P40505 327 aa6.04□□□□□ -1.44
SNU71YGR013W ORT1Q12375 292 aa6.04□□□□□ -1.44
SNU71YGR013W PRP46Q12417 451 aaPredicted RBP6.04□□□□□ -1.44
SNU71YGR013W YPR1Q12458 312 aa6.04□□□□□ -1.44
SNU71YGR013W RGS2Q99188 309 aa6.04□□□□□ -1.44
SNU71YGR013W CDC36P06100 191 aaPredicted RBP6.03□□□□□ -1.44
SNU71YGR013W MAS2P11914 482 aa6.03□□□□□ -1.44
SNU71YGR013W YCR007CP25354 239 aa6.03□□□□□ -1.44
SNU71YGR013W CSM1P25651 190 aa6.03□□□□□ -1.44
SNU71YGR013W CWP1P28319 239 aa6.03□□□□□ -1.44
SNU71YGR013W TOA2P32774 122 aa6.03□□□□□ -1.44
SNU71YGR013W BTT1P40314 149 aaPredicted RBP6.03□□□□□ -1.44
SNU71YGR013W FMC1P40491 155 aa6.03□□□□□ -1.44
SNU71YGR013W SCD6P45978 349 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
SNU71YGR013W DIB1Q06819 143 aaPredicted RBP6.03□□□□□ -1.44
SNU71YGR013W YOL075CQ08234 1294 aa6.03□□□□□ -1.44
SNU71YGR013W REX4Q08237 289 aa6.03□□□□□ -1.44
SNU71YGR013W BTS1Q12051 335 aa6.03□□□□□ -1.44
SNU71YGR013W RNQ1P25367 405 aa6.02□□□□□ -1.44
SNU71YGR013W KRE6P32486 720 aa6.02□□□□□ -1.44
SNU71YGR013W MGM101P32787 269 aaKnown RBP6.02□□□□□ -1.44
SNU71YGR013W KDX1P36005 433 aa6.02□□□□□ -1.44
SNU71YGR013W OTU1P43558 301 aa6.02□□□□□ -1.44
SNU71YGR013W YGR168CP53293 376 aa6.02□□□□□ -1.44
SNU71YGR013W YMR034CQ05131 434 aaPredicted RBP6.02□□□□□ -1.44
SNU71YGR013W BSP1Q06604 576 aa6.02□□□□□ -1.44
SNU71YGR013W TDH3P00359 332 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
SNU71YGR013W FRS2P15625 503 aaKnown RBP6.02□□□□□ -1.45
SNU71YGR013W DOA1P36037 715 aa6.02□□□□□ -1.45
SNU71YGR013W RPC37P36121 282 aa6.02□□□□□ -1.45
SNU71YGR013W ISC1P40015 477 aaKnown RBP6.02□□□□□ -1.45
SNU71YGR013W YIP1P53039 248 aa6.02□□□□□ -1.45
SNU71YGR013W SPP2Q02521 185 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms