RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C RPL1AP0CX43 217 aaKnown RBP2.57□□□□□ -2
PGD1YGL025C RPL1BP0CX44 217 aaKnown RBP2.57□□□□□ -2
PGD1YGL025C RNA1P11745 407 aaKnown RBP2.57□□□□□ -2
PGD1YGL025C CMK2P22517 447 aa2.57□□□□□ -2
PGD1YGL025C VMA8P32610 256 aaKnown RBP2.57□□□□□ -2
PGD1YGL025C LSM12P38828 187 aaKnown RBP2.57□□□□□ -2
PGD1YGL025C HEM14P40012 539 aa2.57□□□□□ -2
PGD1YGL025C CIN2P46670 268 aa2.57□□□□□ -2
PGD1YGL025C AIP1P46680 615 aaKnown RBP2.57□□□□□ -2
PGD1YGL025C SEH1P53011 349 aaKnown RBP2.57□□□□□ -2
PGD1YGL025C REX2P54964 269 aaKnown RBP2.57□□□□□ -2
PGD1YGL025C CIK1Q01649 594 aa2.57□□□□□ -2
PGD1YGL025C YDR541CQ03049 344 aa2.57□□□□□ -2
PGD1YGL025C LDS2Q08218 356 aa2.57□□□□□ -2
PGD1YGL025C RPN5Q12250 445 aaKnown RBP2.57□□□□□ -2
PGD1YGL025C ZUO1P32527 433 aaKnown RBP2.56□□□□□ -2
PGD1YGL025C MLH1P38920 769 aa2.56□□□□□ -2
PGD1YGL025C YIP5P53108 310 aa2.56□□□□□ -2
PGD1YGL025C VAC7P53950 1165 aa2.56□□□□□ -2
PGD1YGL025C KTR6P54070 446 aa2.56□□□□□ -2
PGD1YGL025C ENT5Q03769 411 aaKnown RBP2.56□□□□□ -2
PGD1YGL025C GYL1Q04322 720 aa2.56□□□□□ -2
PGD1YGL025C MSC3Q05812 728 aa2.56□□□□□ -2
PGD1YGL025C MEX67Q99257 599 aaKnown RBP2.56□□□□□ -2
PGD1YGL025C STE7P06784 515 aa2.55□□□□□ -2
PGD1YGL025C RPS18AP0CX55 146 aaKnown RBP2.55□□□□□ -2
PGD1YGL025C RPS18BP0CX56 146 aaPredicted RBP2.55□□□□□ -2
PGD1YGL025C MSP1P28737 362 aa2.55□□□□□ -2
PGD1YGL025C DPH2P32461 534 aa2.55□□□□□ -2
PGD1YGL025C YHR177WP38867 453 aa2.55□□□□□ -2
PGD1YGL025C EFM4P40516 257 aa2.55□□□□□ -2
PGD1YGL025C SEC27P41811 889 aaKnown RBP2.55□□□□□ -2
PGD1YGL025C ATP22P50273 684 aaPredicted RBP2.55□□□□□ -2
PGD1YGL025C FLC3P53121 802 aa2.55□□□□□ -2
PGD1YGL025C RPL21AQ02753 160 aaKnown RBP2.55□□□□□ -2
PGD1YGL025C MCH1Q07376 486 aa2.55□□□□□ -2
PGD1YGL025C GAT3Q07928 141 aa2.55□□□□□ -2
PGD1YGL025C RPL21BQ12672 160 aaKnown RBP2.55□□□□□ -2
PGD1YGL025C ANP1P32629 500 aa2.54□□□□□ -2
PGD1YGL025C SLX1P38324 304 aa2.54□□□□□ -2
PGD1YGL025C MNL1P38888 796 aa2.54□□□□□ -2
PGD1YGL025C CTK3P46963 296 aaPredicted RBP2.54□□□□□ -2
PGD1YGL025C TRF5P48561 642 aaKnown RBP2.54□□□□□ -2
PGD1YGL025C PRP38Q00723 242 aaPredicted RBP2.54□□□□□ -2
PGD1YGL025C YLR177WQ06251 628 aa2.54□□□□□ -2
PGD1YGL025C IPK1Q06667 281 aa2.54□□□□□ -2
PGD1YGL025C AAD15Q08361 143 aa2.54□□□□□ -2
PGD1YGL025C RAX2Q12465 1220 aa2.54□□□□□ -2
PGD1YGL025C TPI1P00942 248 aaKnown RBP2.53□□□□□ -2
PGD1YGL025C TOA1P32773 286 aa2.53□□□□□ -2
PGD1YGL025C PDC2P32896 925 aa2.53□□□□□ -2
PGD1YGL025C SOL2P37262 315 aa2.53□□□□□ -2
PGD1YGL025C DTR1P38125 572 aa2.53□□□□□ -2
PGD1YGL025C PFF1P38244 976 aa2.53□□□□□ -2
PGD1YGL025C CHL4P38907 458 aa2.53□□□□□ -2
PGD1YGL025C SEC9P40357 651 aa2.53□□□□□ -2
PGD1YGL025C LCB2P40970 561 aa2.53□□□□□ -2
PGD1YGL025C YOR376WQ08900 122 aa2.53□□□□□ -2
PGD1YGL025C SFM1Q12314 213 aa2.53□□□□□ -2
PGD1YGL025C MAS2P11914 482 aa2.52□□□□□ -2.01
PGD1YGL025C RRP7P25368 297 aaPredicted RBP2.52□□□□□ -2.01
PGD1YGL025C SPP381P38282 291 aaPredicted RBP2.52□□□□□ -2.01
PGD1YGL025C WSC4P38739 605 aa2.52□□□□□ -2.01
PGD1YGL025C YFL012WP43580 148 aa2.52□□□□□ -2.01
PGD1YGL025C ASN2P49090 572 aaKnown RBP2.52□□□□□ -2.01
PGD1YGL025C ERO1Q03103 563 aa2.52□□□□□ -2.01
PGD1YGL025C TIR4Q12218 487 aaPredicted RBP2.52□□□□□ -2.01
PGD1YGL025C PUT4P15380 627 aa2.51□□□□□ -2.01
PGD1YGL025C PXA2P34230 853 aa2.51□□□□□ -2.01
PGD1YGL025C KAP104P38217 918 aaKnown RBP2.51□□□□□ -2.01
PGD1YGL025C BMT2P38278 337 aa2.51□□□□□ -2.01
PGD1YGL025C WSS1P38838 269 aa2.51□□□□□ -2.01
PGD1YGL025C PEX22P39718 180 aa2.51□□□□□ -2.01
PGD1YGL025C YDR115WQ04598 105 aa2.51□□□□□ -2.01
PGD1YGL025C YOL085CQ99345 113 aa2.51□□□□□ -2.01
PGD1YGL025C SMP1P38128 452 aa2.5□□□□□ -2.01
PGD1YGL025C LRP1P38801 184 aaKnown RBP2.5□□□□□ -2.01
PGD1YGL025C VPS9P54787 451 aa2.5□□□□□ -2.01
PGD1YGL025C ATP16Q12165 160 aa2.5□□□□□ -2.01
PGD1YGL025C HIF1Q12373 385 aa2.5□□□□□ -2.01
PGD1YGL025C HMS1Q12398 434 aa2.5□□□□□ -2.01
PGD1YGL025C HEM4P06174 275 aa2.49□□□□□ -2.01
PGD1YGL025C UNG1P12887 359 aa2.49□□□□□ -2.01
PGD1YGL025C PAR32Q12515 295 aaKnown RBP2.49□□□□□ -2.01
PGD1YGL025C MNE1P24720 663 aa2.48□□□□□ -2.01
PGD1YGL025C RPL16AP26784 199 aaKnown RBP2.48□□□□□ -2.01
PGD1YGL025C LDS1P31379 325 aa2.48□□□□□ -2.01
PGD1YGL025C SHE1P38200 338 aa2.48□□□□□ -2.01
PGD1YGL025C FHL1P39521 936 aa2.48□□□□□ -2.01
PGD1YGL025C YER184CP39961 794 aa2.48□□□□□ -2.01
PGD1YGL025C YJL055WP47044 245 aa2.48□□□□□ -2.01
PGD1YGL025C RSC1P53236 928 aa2.48□□□□□ -2.01
PGD1YGL025C YGR067CP53243 804 aa2.48□□□□□ -2.01
PGD1YGL025C HST1P53685 503 aa2.48□□□□□ -2.01
PGD1YGL025C YPL107WQ02873 248 aa2.48□□□□□ -2.01
PGD1YGL025C FSH2Q05015 223 aa2.48□□□□□ -2.01
PGD1YGL025C YLH47Q06493 454 aa2.48□□□□□ -2.01
PGD1YGL025C YDL109CQ12103 647 aa2.48□□□□□ -2.01
PGD1YGL025C SRN2Q99176 213 aa2.48□□□□□ -2.01
PGD1YGL025C YOR338WQ99326 363 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms