RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W STE24P47154 453 aa1□□□□□ -2.25
SMC1YFL008W CWC25P53854 179 aaKnown RBP1□□□□□ -2.25
SMC1YFL008W TLG1Q03322 224 aa1□□□□□ -2.25
SMC1YFL008W URC2Q04411 772 aa1□□□□□ -2.25
SMC1YFL008W HRI1Q05905 244 aaKnown RBP1□□□□□ -2.25
SMC1YFL008W RIM20Q12033 661 aa1□□□□□ -2.25
SMC1YFL008W YLR108CQ12259 485 aa1□□□□□ -2.25
SMC1YFL008W SFI1Q12369 946 aa1□□□□□ -2.25
SMC1YFL008W SMC6Q12749 1114 aa1□□□□□ -2.25
SMC1YFL008W CAR1P00812 333 aaKnown RBP1□□□□□ -2.25
SMC1YFL008W RAD3P06839 778 aa1□□□□□ -2.25
SMC1YFL008W PRB1P09232 635 aa1□□□□□ -2.25
SMC1YFL008W CAP2P13517 287 aa1□□□□□ -2.25
SMC1YFL008W SUI2P20459 304 aaKnown RBP1□□□□□ -2.25
SMC1YFL008W CPR2P23285 205 aa1□□□□□ -2.25
SMC1YFL008W CLB3P24870 427 aa1□□□□□ -2.25
SMC1YFL008W PRO3P32263 286 aaKnown RBP1□□□□□ -2.25
SMC1YFL008W ECT1P33412 323 aa1□□□□□ -2.25
SMC1YFL008W SDH3P33421 198 aa1□□□□□ -2.25
SMC1YFL008W RRP1P35178 278 aaPredicted RBP1□□□□□ -2.25
SMC1YFL008W MRPL40P36534 297 aa1□□□□□ -2.25
SMC1YFL008W RIB5P38145 238 aa1□□□□□ -2.25
SMC1YFL008W MIG3P39943 394 aa1□□□□□ -2.25
SMC1YFL008W YIL089WP40500 205 aa1□□□□□ -2.25
SMC1YFL008W ARR1Q06596 294 aa1□□□□□ -2.25
SMC1YFL008W TPI1P00942 248 aaKnown RBP1□□□□□ -2.25
SMC1YFL008W SPS4P09937 338 aa1□□□□□ -2.25
SMC1YFL008W MSS116P15424 664 aaKnown RBP1□□□□□ -2.25
SMC1YFL008W BYE1P36106 594 aa1□□□□□ -2.25
SMC1YFL008W PRY2P36110 329 aa1□□□□□ -2.25
SMC1YFL008W ZTA1P38230 334 aaKnown RBP1□□□□□ -2.25
SMC1YFL008W LRP1P38801 184 aaKnown RBP1□□□□□ -2.25
SMC1YFL008W NOC2P39744 710 aaKnown RBP1□□□□□ -2.25
SMC1YFL008W ILM1P47155 203 aa1□□□□□ -2.25
SMC1YFL008W SRB7P47822 140 aa1□□□□□ -2.25
SMC1YFL008W SHE4P51534 789 aa1□□□□□ -2.25
SMC1YFL008W VAC7P53950 1165 aa1□□□□□ -2.25
SMC1YFL008W MRS2Q01926 470 aa1□□□□□ -2.25
SMC1YFL008W RCF1Q03713 159 aa1□□□□□ -2.25
SMC1YFL008W ERV41Q04651 352 aa1□□□□□ -2.25
SMC1YFL008W MDM36Q06820 579 aa1□□□□□ -2.25
SMC1YFL008W YOL075CQ08234 1294 aa1□□□□□ -2.25
SMC1YFL008W DNL4Q08387 944 aaPredicted RBP1□□□□□ -2.25
SMC1YFL008W SGT1Q08446 395 aa1□□□□□ -2.25
SMC1YFL008W PCL1P24867 279 aa0.99□□□□□ -2.25
SMC1YFL008W PXA2P34230 853 aa0.99□□□□□ -2.25
SMC1YFL008W VHC1P38329 1120 aa0.99□□□□□ -2.25
SMC1YFL008W SKO1Q02100 647 aa0.99□□□□□ -2.25
SMC1YFL008W CWC21Q03375 135 aaKnown RBP0.99□□□□□ -2.25
SMC1YFL008W HER2Q03557 464 aa0.99□□□□□ -2.25
SMC1YFL008W DON1Q05610 365 aa0.99□□□□□ -2.25
SMC1YFL008W YLR287CQ05881 355 aa0.99□□□□□ -2.25
SMC1YFL008W ATG17Q06410 417 aa0.99□□□□□ -2.25
SMC1YFL008W RUD3Q12234 484 aaKnown RBP0.99□□□□□ -2.25
SMC1YFL008W WTM1Q12363 437 aaKnown RBP0.99□□□□□ -2.25
SMC1YFL008W RED1P14291 827 aa0.99□□□□□ -2.25
SMC1YFL008W TAL1P15019 335 aaKnown RBP0.99□□□□□ -2.25
SMC1YFL008W EXO70P19658 623 aa0.99□□□□□ -2.25
SMC1YFL008W ANP1P32629 500 aa0.99□□□□□ -2.25
SMC1YFL008W CPR5P35176 225 aa0.99□□□□□ -2.25
SMC1YFL008W LIN1P38852 340 aaPredicted RBP0.99□□□□□ -2.25
SMC1YFL008W SPT8P38915 602 aa0.99□□□□□ -2.25
SMC1YFL008W BFR1P38934 470 aaKnown RBP RIP-Chip data0.99□□□□□ -2.25 RIP-Chip
SMC1YFL008W AIM10P39965 576 aaKnown RBP0.99□□□□□ -2.25
SMC1YFL008W HOP2P53187 214 aa0.99□□□□□ -2.25
SMC1YFL008W YMR018WQ04364 514 aa0.99□□□□□ -2.25
SMC1YFL008W SNX3Q08826 162 aaKnown RBP0.99□□□□□ -2.25
SMC1YFL008W YGK3Q12222 375 aaPredicted RBP0.99□□□□□ -2.25
SMC1YFL008W NCA2Q12374 616 aa0.99□□□□□ -2.25
SMC1YFL008W HIS4P00815 799 aaKnown RBP0.99□□□□□ -2.25
SMC1YFL008W RPL1AP0CX43 217 aaKnown RBP0.99□□□□□ -2.25
SMC1YFL008W RPL1BP0CX44 217 aaKnown RBP0.99□□□□□ -2.25
SMC1YFL008W RPL3P14126 387 aaKnown RBP0.99□□□□□ -2.25
SMC1YFL008W ALG1P16661 449 aa0.99□□□□□ -2.25
SMC1YFL008W SPO7P18410 259 aa0.99□□□□□ -2.25
SMC1YFL008W CLN1P20437 546 aa0.99□□□□□ -2.25
SMC1YFL008W BRF1P29056 596 aa0.99□□□□□ -2.25
SMC1YFL008W PMT2P31382 759 aa0.99□□□□□ -2.25
SMC1YFL008W AGA2P32781 87 aa0.99□□□□□ -2.25
SMC1YFL008W RAD5P32849 1169 aaPredicted RBP0.99□□□□□ -2.25
SMC1YFL008W UTH1P36135 365 aa0.99□□□□□ -2.25
SMC1YFL008W YHR054CP38780 354 aa0.99□□□□□ -2.25
SMC1YFL008W CAK1P43568 368 aaPredicted RBP0.99□□□□□ -2.25
SMC1YFL008W TOS3P43637 560 aa0.99□□□□□ -2.25
SMC1YFL008W SFH5P47008 294 aa0.99□□□□□ -2.25
SMC1YFL008W EFM3P47163 339 aa0.99□□□□□ -2.25
SMC1YFL008W RHO5P53879 331 aaKnown RBP0.99□□□□□ -2.25
SMC1YFL008W RRP17Q04031 235 aaPredicted RBP0.99□□□□□ -2.25
SMC1YFL008W GAT3Q07928 141 aa0.99□□□□□ -2.25
SMC1YFL008W IRA2P19158 3079 aa0.98□□□□□ -2.25
SMC1YFL008W KSS1P14681 368 aa0.98□□□□□ -2.25
SMC1YFL008W RRP7P25368 297 aaPredicted RBP0.98□□□□□ -2.25
SMC1YFL008W GFD2P25370 566 aaKnown RBP0.98□□□□□ -2.25
SMC1YFL008W PAP1P29468 568 aaKnown RBP0.98□□□□□ -2.25
SMC1YFL008W CRM1P30822 1084 aaKnown RBP0.98□□□□□ -2.25
SMC1YFL008W RPN12P32496 274 aa0.98□□□□□ -2.25
SMC1YFL008W YEL043WP32618 956 aa0.98□□□□□ -2.25
SMC1YFL008W FRM2P37261 193 aa0.98□□□□□ -2.25
SMC1YFL008W DTR1P38125 572 aa0.98□□□□□ -2.25
SMC1YFL008W LCP5P40079 357 aaPredicted RBP0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms