RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	SOL2	P37262	315 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	ZTA1	P38230	334 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	MUP3	P38734	546 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	BUR6	P40096	142 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	PMT6	P42934	759 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	ALK1	P43633	760 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	YJL163C	P46996	555 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	RPA34	P47006	233 aa	Predicted RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	HLJ1	P48353	224 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	DSD1	P53095	428 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	ALG11	P53954	548 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	ACT1	P60010	375 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	SNP1	Q00916	300 aa	Predicted RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	RPA49	Q01080	415 aa	Predicted RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	YPL014W	Q02606	381 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	YPL077C	Q02831	240 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	UME1	Q03010	460 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	ODC1	Q03028	310 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	RSC9	Q03124	581 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	AIM36	Q03798	255 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	YDR132C	Q03900	495 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	CSM3	Q04659	317 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	MFB1	Q04922	465 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	YLR297W	Q05899	129 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	FRQ1	Q06389	190 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	ENV9	Q08651	330 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	LPX1	Q12405	387 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	PRM4	Q12498	284 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	DDI2	P0CH63	225 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	DDI3	P0CH64	225 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	BAR1	P12630	587 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	PHO81	P17442	1178 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	FAA1	P30624	700 aa	Known RBP	4.13	□□□□□ -1.75
SSB1	YDL229W	AGP2	P38090	596 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	DTR1	P38125	572 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	YBR284W	P38150	797 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	YBR285W	P38354	144 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	YEL068C	P39977	110 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	RFC4	P40339	323 aa	Known RBP	4.13	□□□□□ -1.75
SSB1	YDL229W	SEC24	P40482	926 aa	Known RBP	4.13	□□□□□ -1.75
SSB1	YDL229W	IRC18	P47056	224 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	FAA4	P47912	694 aa	Known RBP	4.13	□□□□□ -1.75
SSB1	YDL229W	SAM37	P50110	327 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	YGL138C	P53122	345 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	ATF2	P53296	535 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	SPC98	P53540	846 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	HHO1	P53551	258 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	YNR066C	P53752	436 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	CTL1	Q03220	320 aa	Known RBP	4.13	□□□□□ -1.75
SSB1	YDL229W	EFR3	Q03653	782 aa	Known RBP	4.13	□□□□□ -1.75
SSB1	YDL229W	CAB1	Q04430	367 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	YML096W	Q04489	525 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	MRPL1	Q04599	285 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	SEN15	Q04675	128 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	RAD34	Q06665	692 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	FMP45	Q07651	309 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	YGL194C-A	Q2V2P6	80 aa		4.13	□□□□□ -1.75
SSB1	YDL229W	RPL9A	P05738	191 aa	Known RBP	4.12	□□□□□ -1.75
SSB1	YDL229W	TPK1	P06244	397 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	IDP1	P21954	428 aa	Known RBP	4.12	□□□□□ -1.75
SSB1	YDL229W	YCK1	P23291	538 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	DAL2	P25335	343 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	ADK2	P26364	225 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	TRK2	P28584	889 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	SFP1	P32432	683 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	MF(ALPHA)2	P32435	120 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	NGG1	P32494	702 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
SSB1	YDL229W	UGP1	P32861	499 aa	Known RBP	4.12	□□□□□ -1.75
SSB1	YDL229W	PTK1	P36002	662 aa	Predicted RBP	4.12	□□□□□ -1.75
SSB1	YDL229W	KKQ8	P36004	724 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	YBR032W	P38223	100 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	RRP4	P38792	359 aa	Known RBP	4.12	□□□□□ -1.75
SSB1	YDL229W	DUN1	P39009	513 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	FIR1	P40020	876 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	UTP7	P40055	554 aa	Known RBP	4.12	□□□□□ -1.75
SSB1	YDL229W	MGS1	P40151	587 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	LAS21	P40367	830 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	PRK1	P40494	810 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	HXT9	P40885	567 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	NSE4	P43124	402 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	YJL132W	P47014	750 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	CPR7	P47103	393 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	SNN1	P48232	102 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	RPL9B	P51401	191 aa	Known RBP	4.12	□□□□□ -1.75
SSB1	YDL229W	DIA3	P52290	468 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	UBC12	P52491	188 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	ARO8	P53090	500 aa	Known RBP	4.12	□□□□□ -1.75
SSB1	YDL229W	FLC3	P53121	802 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	YGL039W	P53183	348 aa	Known RBP	4.12	□□□□□ -1.75
SSB1	YDL229W	ATG4	P53867	494 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	SHR3	Q02774	210 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	YPL108W	Q02872	168 aa	Predicted RBP	4.12	□□□□□ -1.75
SSB1	YDL229W	YPL113C	Q02961	396 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	PFA5	Q03289	374 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	RKM2	Q03942	479 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	GMC1	Q04399	608 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	MDM30	Q05930	598 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	DUS4	Q06063	367 aa		4.12	□□□□□ -1.75
SSB1	YDL229W	BER1	Q06688	274 aa	Known RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 60.9 ms