RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W YNR068CP53754 272 aa2.47□□□□□ -2.01
SHS1YDL225W AAT2P23542 418 aaKnown RBP2.47□□□□□ -2.01
SHS1YDL225W POT1P27796 417 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SHS1YDL225W PSO2P30620 661 aa2.47□□□□□ -2.01
SHS1YDL225W PTI1P39927 425 aaPredicted RBP2.47□□□□□ -2.01
SHS1YDL225W SEC27P41811 889 aaKnown RBP2.47□□□□□ -2.01
SHS1YDL225W YDL114WQ07530 308 aa2.47□□□□□ -2.01
SHS1YDL225W MFG1Q07684 458 aa2.47□□□□□ -2.01
SHS1YDL225W PEX27Q08580 376 aa2.47□□□□□ -2.01
SHS1YDL225W NAG1Q8TGN9 163 aa2.47□□□□□ -2.01
SHS1YDL225W YOR338WQ99326 363 aa2.47□□□□□ -2.01
SHS1YDL225W BAT1P38891 393 aaKnown RBP2.46□□□□□ -2.02
SHS1YDL225W YGL039WP53183 348 aaKnown RBP2.46□□□□□ -2.02
SHS1YDL225W RET3P53600 189 aa2.46□□□□□ -2.02
SHS1YDL225W YET2Q04210 160 aa2.46□□□□□ -2.02
SHS1YDL225W LIP2Q06005 328 aa2.46□□□□□ -2.02
SHS1YDL225W YDL199CQ12407 687 aa2.46□□□□□ -2.02
SHS1YDL225W MEX67Q99257 599 aaKnown RBP2.46□□□□□ -2.02
SHS1YDL225W MRPL8P22353 238 aa2.45□□□□□ -2.02
SHS1YDL225W PCL1P24867 279 aa2.45□□□□□ -2.02
SHS1YDL225W FUN26P31381 517 aa2.45□□□□□ -2.02
SHS1YDL225W MSK1P32048 576 aa2.45□□□□□ -2.02
SHS1YDL225W SNL1P40548 159 aa2.45□□□□□ -2.02
SHS1YDL225W HAL1Q01766 294 aa2.45□□□□□ -2.02
SHS1YDL225W UTP6Q02354 440 aaKnown RBP2.45□□□□□ -2.02
SHS1YDL225W DBP9Q06218 594 aaKnown RBP2.45□□□□□ -2.02
SHS1YDL225W GAT3Q07928 141 aa2.45□□□□□ -2.02
SHS1YDL225W PCL9Q12477 304 aa2.45□□□□□ -2.02
SHS1YDL225W SFG1Q12507 346 aa2.45□□□□□ -2.02
SHS1YDL225W DBR1P24309 405 aaKnown RBP2.44□□□□□ -2.02
SHS1YDL225W RDS1P25611 832 aa2.44□□□□□ -2.02
SHS1YDL225W SPO23P33757 523 aa2.44□□□□□ -2.02
SHS1YDL225W PTK1P36002 662 aaPredicted RBP2.44□□□□□ -2.02
SHS1YDL225W UTH1P36135 365 aa2.44□□□□□ -2.02
SHS1YDL225W SIF2P38262 535 aa2.44□□□□□ -2.02
SHS1YDL225W LYS12P40495 371 aaKnown RBP2.44□□□□□ -2.02
SHS1YDL225W DFG10P40526 253 aa2.44□□□□□ -2.02
SHS1YDL225W YOR012WQ12351 137 aa2.44□□□□□ -2.02
SHS1YDL225W FSH3Q99369 266 aa2.44□□□□□ -2.02
SHS1YDL225W MAS2P11914 482 aa2.44□□□□□ -2.02
SHS1YDL225W OPI1P21957 404 aa2.44□□□□□ -2.02
SHS1YDL225W CDC50P25656 391 aa2.44□□□□□ -2.02
SHS1YDL225W RPA34P47006 233 aaPredicted RBP2.44□□□□□ -2.02
SHS1YDL225W MPS2P53159 387 aa2.44□□□□□ -2.02
SHS1YDL225W REX2P54964 269 aaKnown RBP2.44□□□□□ -2.02
SHS1YDL225W TSA2Q04120 196 aa2.44□□□□□ -2.02
SHS1YDL225W YPR078CQ06813 372 aa2.44□□□□□ -2.02
SHS1YDL225W SHS1Q07657 551 aa2.44□□□□□ -2.02
SHS1YDL225W SPT7P35177 1332 aa2.43□□□□□ -2.02
SHS1YDL225W STE3P06783 470 aa2.43□□□□□ -2.02
SHS1YDL225W RPS18AP0CX55 146 aaKnown RBP2.43□□□□□ -2.02
SHS1YDL225W RPS18BP0CX56 146 aaPredicted RBP2.43□□□□□ -2.02
SHS1YDL225W THR4P16120 514 aaKnown RBP2.43□□□□□ -2.02
SHS1YDL225W EFB1P32471 206 aaKnown RBP2.43□□□□□ -2.02
SHS1YDL225W YER186CP40101 306 aa2.43□□□□□ -2.02
SHS1YDL225W CIN2P46670 268 aa2.43□□□□□ -2.02
SHS1YDL225W CTK3P46963 296 aaPredicted RBP2.43□□□□□ -2.02
SHS1YDL225W EFM3P47163 339 aa2.43□□□□□ -2.02
SHS1YDL225W YNL143CP53908 130 aa2.43□□□□□ -2.02
SHS1YDL225W AQR1P53943 586 aa2.43□□□□□ -2.02
SHS1YDL225W SKI8Q02793 397 aaPredicted RBP2.43□□□□□ -2.02
SHS1YDL225W AIM33Q04516 312 aa2.43□□□□□ -2.02
SHS1YDL225W YLH47Q06493 454 aa2.43□□□□□ -2.02
SHS1YDL225W RPS16AP0CX51 143 aaKnown RBP2.42□□□□□ -2.02
SHS1YDL225W RPS16BP0CX52 143 aaKnown RBP2.42□□□□□ -2.02
SHS1YDL225W SAG1P20840 650 aa2.42□□□□□ -2.02
SHS1YDL225W VAM7P32912 316 aa2.42□□□□□ -2.02
SHS1YDL225W OM14P38325 134 aa2.42□□□□□ -2.02
SHS1YDL225W PFS1P38872 237 aa2.42□□□□□ -2.02
SHS1YDL225W TIM17P39515 158 aa2.42□□□□□ -2.02
SHS1YDL225W LCP5P40079 357 aaPredicted RBP2.42□□□□□ -2.02
SHS1YDL225W KEG1P43614 200 aa2.42□□□□□ -2.02
SHS1YDL225W AIP1P46680 615 aaKnown RBP2.42□□□□□ -2.02
SHS1YDL225W CUE3P53137 624 aaKnown RBP2.42□□□□□ -2.02
SHS1YDL225W YGR016WP53209 190 aa2.42□□□□□ -2.02
SHS1YDL225W YMR010WQ03687 405 aa2.42□□□□□ -2.02
SHS1YDL225W YDR286CQ05530 114 aa2.42□□□□□ -2.02
SHS1YDL225W YHC1Q05900 231 aaKnown RBP2.42□□□□□ -2.02
SHS1YDL225W PML1Q07930 204 aaPredicted RBP2.42□□□□□ -2.02
SHS1YDL225W NBL1Q3E7Y6 73 aa2.42□□□□□ -2.02
SHS1YDL225W PRB1P09232 635 aa2.41□□□□□ -2.02
SHS1YDL225W MAS1P10507 462 aa2.41□□□□□ -2.02
SHS1YDL225W HSP26P15992 214 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SHS1YDL225W GRR1P24814 1151 aa2.41□□□□□ -2.02
SHS1YDL225W CHA1P25379 360 aaKnown RBP2.41□□□□□ -2.02
SHS1YDL225W RPL16AP26784 199 aaKnown RBP2.41□□□□□ -2.02
SHS1YDL225W SSE1P32589 693 aaKnown RBP2.41□□□□□ -2.02
SHS1YDL225W CAJ1P39101 391 aa2.41□□□□□ -2.02
SHS1YDL225W SEC9P40357 651 aa2.41□□□□□ -2.02
SHS1YDL225W TRF5P48561 642 aaKnown RBP2.41□□□□□ -2.02
SHS1YDL225W YMR310CQ04867 317 aaPredicted RBP2.41□□□□□ -2.02
SHS1YDL225W YOL075CQ08234 1294 aa2.41□□□□□ -2.02
SHS1YDL225W MCT1Q12283 360 aa2.41□□□□□ -2.02
SHS1YDL225W GLE1Q12315 538 aa2.41□□□□□ -2.02
SHS1YDL225W PSY3Q12318 242 aa2.41□□□□□ -2.02
SHS1YDL225W AIM45Q12480 344 aaKnown RBP2.41□□□□□ -2.02
SHS1YDL225W DET1Q99288 334 aaKnown RBP2.41□□□□□ -2.02
SHS1YDL225W HEM4P06174 275 aa2.41□□□□□ -2.02
SHS1YDL225W TAL1P15019 335 aaKnown RBP2.41□□□□□ -2.02
SHS1YDL225W ZRC1P20107 442 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms