RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C YOP1Q12402 180 aa1.89□□□□□ -2.11
ASM4YDL088C INH1P01097 85 aa1.89□□□□□ -2.11
ASM4YDL088C RPS18AP0CX55 146 aaKnown RBP1.89□□□□□ -2.11
ASM4YDL088C RPS18BP0CX56 146 aaPredicted RBP1.89□□□□□ -2.11
ASM4YDL088C HSP104P31539 908 aaKnown RBP1.89□□□□□ -2.11
ASM4YDL088C RIM1P32445 135 aaKnown RBP1.89□□□□□ -2.11
ASM4YDL088C NFU1P32860 256 aa1.89□□□□□ -2.11
ASM4YDL088C AEP3Q12089 606 aa1.89□□□□□ -2.11
ASM4YDL088C APC2Q12440 853 aa1.89□□□□□ -2.11
ASM4YDL088C FUR1P18562 216 aaKnown RBP1.88□□□□□ -2.11
ASM4YDL088C TIR2P33890 251 aa1.88□□□□□ -2.11
ASM4YDL088C YBR241CP38142 488 aa1.88□□□□□ -2.11
ASM4YDL088C STE24P47154 453 aa1.88□□□□□ -2.11
ASM4YDL088C TOM22P49334 152 aa1.88□□□□□ -2.11
ASM4YDL088C RRG1Q12167 365 aaPredicted RBP1.88□□□□□ -2.11
ASM4YDL088C MEX67Q99257 599 aaKnown RBP1.88□□□□□ -2.11
ASM4YDL088C ERV1P27882 189 aa1.87□□□□□ -2.11
ASM4YDL088C BLI1P35727 113 aa1.87□□□□□ -2.11
ASM4YDL088C DOA1P36037 715 aa1.87□□□□□ -2.11
ASM4YDL088C BYE1P36106 594 aa1.87□□□□□ -2.11
ASM4YDL088C SMP1P38128 452 aa1.87□□□□□ -2.11
ASM4YDL088C ZTA1P38230 334 aaKnown RBP1.87□□□□□ -2.11
ASM4YDL088C STN1P38960 494 aa1.87□□□□□ -2.11
ASM4YDL088C CPR7P47103 393 aa1.87□□□□□ -2.11
ASM4YDL088C SEH1P53011 349 aaKnown RBP1.87□□□□□ -2.11
ASM4YDL088C HST4P53688 370 aa1.87□□□□□ -2.11
ASM4YDL088C DDC1Q08949 612 aa1.87□□□□□ -2.11
ASM4YDL088C MCT1Q12283 360 aa1.87□□□□□ -2.11
ASM4YDL088C SCM3Q12334 223 aa1.87□□□□□ -2.11
ASM4YDL088C ERP4Q12450 207 aa1.87□□□□□ -2.11
ASM4YDL088C TOA1P32773 286 aa1.86□□□□□ -2.11
ASM4YDL088C CYM1P32898 989 aa1.86□□□□□ -2.11
ASM4YDL088C AST1P35183 429 aa1.86□□□□□ -2.11
ASM4YDL088C RNH201P53942 307 aa1.86□□□□□ -2.11
ASM4YDL088C MRX8Q05473 314 aa1.86□□□□□ -2.11
ASM4YDL088C OPI3P05375 206 aa1.85□□□□□ -2.11
ASM4YDL088C URA7P28274 579 aaKnown RBP1.85□□□□□ -2.11
ASM4YDL088C SER3P40054 469 aa1.85□□□□□ -2.11
ASM4YDL088C VAC7P53950 1165 aa1.85□□□□□ -2.11
ASM4YDL088C FSH2Q05015 223 aa1.85□□□□□ -2.11
ASM4YDL088C AUS1Q08409 1394 aa1.85□□□□□ -2.11
ASM4YDL088C HSP82P02829 709 aaKnown RBP1.85□□□□□ -2.11
ASM4YDL088C ARF1P11076 181 aaKnown RBP1.85□□□□□ -2.11
ASM4YDL088C LDS1P31379 325 aa1.85□□□□□ -2.11
ASM4YDL088C AGA2P32781 87 aa1.85□□□□□ -2.11
ASM4YDL088C PTK1P36002 662 aaPredicted RBP1.85□□□□□ -2.11
ASM4YDL088C LSM5P40089 93 aaKnown RBP1.85□□□□□ -2.11
ASM4YDL088C RPN14P53196 417 aa1.85□□□□□ -2.11
ASM4YDL088C SFM1Q12314 213 aa1.85□□□□□ -2.11
ASM4YDL088C ADK2P26364 225 aa1.84□□□□□ -2.12
ASM4YDL088C PEX5P35056 612 aa1.84□□□□□ -2.12
ASM4YDL088C COS9P36034 407 aa1.84□□□□□ -2.12
ASM4YDL088C HEM14P40012 539 aa1.84□□□□□ -2.12
ASM4YDL088C RRT13P40042 185 aa1.84□□□□□ -2.12
ASM4YDL088C KEG1P43614 200 aa1.84□□□□□ -2.12
ASM4YDL088C TOS2P50078 622 aa1.84□□□□□ -2.12
ASM4YDL088C CWC22P53333 577 aaKnown RBP1.84□□□□□ -2.12
ASM4YDL088C RRN9P53437 365 aa1.84□□□□□ -2.12
ASM4YDL088C SXM1Q04175 944 aaKnown RBP1.84□□□□□ -2.12
ASM4YDL088C ASA1Q06822 443 aa1.84□□□□□ -2.12
ASM4YDL088C YOR376WQ08900 122 aa1.84□□□□□ -2.12
ASM4YDL088C SAL1D6W196 494 aa1.83□□□□□ -2.12
ASM4YDL088C BIO3P50277 480 aa1.83□□□□□ -2.12
ASM4YDL088C ERO1Q03103 563 aa1.83□□□□□ -2.12
ASM4YDL088C ERB1Q04660 807 aaKnown RBP1.83□□□□□ -2.12
ASM4YDL088C ECM7Q06200 448 aa1.83□□□□□ -2.12
ASM4YDL088C NSE1Q07913 336 aa1.83□□□□□ -2.12
ASM4YDL088C RNH203Q12338 110 aa1.83□□□□□ -2.12
ASM4YDL088C YPR096CO13587 100 aa1.82□□□□□ -2.12
ASM4YDL088C PDE2P06776 526 aa1.82□□□□□ -2.12
ASM4YDL088C CLB1P24868 471 aa1.82□□□□□ -2.12
ASM4YDL088C PHO91P27514 894 aa1.82□□□□□ -2.12
ASM4YDL088C DBF4P32325 704 aa1.82□□□□□ -2.12
ASM4YDL088C SPS19P32573 292 aaKnown RBP1.82□□□□□ -2.12
ASM4YDL088C NRP1P32770 719 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
ASM4YDL088C PXA2P34230 853 aa1.82□□□□□ -2.12
ASM4YDL088C TRR2P38816 342 aa1.82□□□□□ -2.12
ASM4YDL088C FAD1P38913 306 aa1.82□□□□□ -2.12
ASM4YDL088C SEC27P41811 889 aaKnown RBP1.82□□□□□ -2.12
ASM4YDL088C STB1P42845 420 aa1.82□□□□□ -2.12
ASM4YDL088C CIN2P46670 268 aa1.82□□□□□ -2.12
ASM4YDL088C MRX11Q03079 207 aa1.82□□□□□ -2.12
ASM4YDL088C RCF1Q03713 159 aa1.82□□□□□ -2.12
ASM4YDL088C YDR341CQ05506 607 aaKnown RBP1.82□□□□□ -2.12
ASM4YDL088C HIF1Q12373 385 aa1.82□□□□□ -2.12
ASM4YDL088C YOL085CQ99345 113 aa1.82□□□□□ -2.12
ASM4YDL088C RPL12AP0CX53 165 aaKnown RBP1.81□□□□□ -2.12
ASM4YDL088C RPL12BP0CX54 165 aa1.81□□□□□ -2.12
ASM4YDL088C FUS3P16892 353 aaKnown RBP1.81□□□□□ -2.12
ASM4YDL088C OPI1P21957 404 aa1.81□□□□□ -2.12
ASM4YDL088C CHA1P25379 360 aaKnown RBP1.81□□□□□ -2.12
ASM4YDL088C RPL16AP26784 199 aaKnown RBP1.81□□□□□ -2.12
ASM4YDL088C MSP1P28737 362 aa1.81□□□□□ -2.12
ASM4YDL088C SWI3P32591 825 aa1.81□□□□□ -2.12
ASM4YDL088C ANP1P32629 500 aa1.81□□□□□ -2.12
ASM4YDL088C RPS0AP32905 252 aaKnown RBP1.81□□□□□ -2.12
ASM4YDL088C QDR3P38227 689 aa1.81□□□□□ -2.12
ASM4YDL088C YML6P51998 286 aa1.81□□□□□ -2.12
ASM4YDL088C RMI1Q02685 241 aa1.81□□□□□ -2.12
ASM4YDL088C PRP3Q03338 469 aaPredicted RBP1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms