RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	ALG6	Q12001	544 aa	Known RBP	5.85	□□□□□ -1.47
RSA4	YCR072C	PKH2	Q12236	1081 aa	Known RBP	5.85	□□□□□ -1.47
RSA4	YCR072C	PDH1	Q12428	516 aa	Known RBP	5.85	□□□□□ -1.47
RSA4	YCR072C	ECM3	Q99252	613 aa		5.85	□□□□□ -1.47
RSA4	YCR072C	CDC28	P00546	298 aa	Known RBP	5.84	□□□□□ -1.47
RSA4	YCR072C	RAD52	P06778	471 aa	Known RBP	5.84	□□□□□ -1.47
RSA4	YCR072C	ATP1	P07251	545 aa	Known RBP	5.84	□□□□□ -1.47
RSA4	YCR072C	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.84	□□□□□ -1.47
RSA4	YCR072C	RPS4A	P0CX35	261 aa	Known RBP	5.84	□□□□□ -1.47
RSA4	YCR072C	RPS4B	P0CX36	261 aa	Known RBP	5.84	□□□□□ -1.47
RSA4	YCR072C	RPS18A	P0CX55	146 aa	Known RBP	5.84	□□□□□ -1.47
RSA4	YCR072C	RPS18B	P0CX56	146 aa	Predicted RBP	5.84	□□□□□ -1.47
RSA4	YCR072C	TY1A-DR6	P0CX70	440 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	TY1A-ER1	P0CX71	440 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	TY1A-LR2	P0CX72	440 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	TY1A-PL	P0CX73	440 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	TY1A-JR1	P0CX74	440 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	TY1A-LR3	P0CX75	440 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	TY1A-ML2	P0CX76	440 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
RSA4	YCR072C	PHO80	P20052	293 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	STE50	P25344	346 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	RNQ1	P25367	405 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	CDC50	P25656	391 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	MRPL6	P32904	214 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	AVT5	P38176	459 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	SUL1	P38359	859 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	NVJ1	P38881	321 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	SAW1	P39735	261 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	YMR144W	P40214	342 aa	Known RBP	5.84	□□□□□ -1.47
RSA4	YCR072C	YIL161W	P40449	235 aa	Known RBP	5.84	□□□□□ -1.47
RSA4	YCR072C	ASG7	P46993	209 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	COS12	P53053	380 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	VPS62	P53285	467 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	GRX5	Q02784	150 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	YPL113C	Q02961	396 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	IRC4	Q03036	179 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	RUB1	Q03919	77 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	TY1A-GR1	Q12085	440 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	SLM3	Q12093	417 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	PFK27	Q12471	397 aa	Predicted RBP	5.84	□□□□□ -1.47
RSA4	YCR072C	PCC1	Q3E833	88 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.84	□□□□□ -1.47
RSA4	YCR072C	TY1A-OL	Q92392	440 aa	Known RBP	5.84	□□□□□ -1.47
RSA4	YCR072C	AFI1	Q99222	893 aa		5.84	□□□□□ -1.47
RSA4	YCR072C	SCEI	P03882	235 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	HIS5	P07172	385 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	SPS4	P09937	338 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	MRP1	P10662	321 aa	Known RBP	5.84	□□□□□ -1.48
RSA4	YCR072C	APE1	P14904	514 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	PUP3	P25451	205 aa	Known RBP	5.84	□□□□□ -1.48
RSA4	YCR072C	ADK2	P26364	225 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	MAL32	P38158	584 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	PEX32	P38292	413 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	ATG12	P38316	186 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	FAD1	P38913	306 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	ERV46	P39727	415 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	PGD1	P40356	397 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	NAS2	P40555	220 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	TAH11	P47112	604 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	SNN1	P48232	102 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	LYS20	P48570	428 aa	Known RBP	5.84	□□□□□ -1.48
RSA4	YCR072C	HNT2	P49775	206 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	YBP2	P53169	641 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	MAL12	P53341	584 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	MRPL22	P53881	309 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	VPS9	P54787	451 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	NUP116	Q02630	1113 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	OAZ1	Q02803	292 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	YPL108W	Q02872	168 aa	Predicted RBP	5.84	□□□□□ -1.48
RSA4	YCR072C	YLR108C	Q12259	485 aa		5.84	□□□□□ -1.48
RSA4	YCR072C	CYC1	P00044	109 aa	Predicted RBP	5.83	□□□□□ -1.48
RSA4	YCR072C	PHO5	P00635	467 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	AAC1	P04710	309 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	SPS2	P08459	502 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	MAS2	P11914	482 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	SIR1	P21691	654 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	SLY1	P22213	666 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	IFM1	P25038	676 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	POF1	P25576	258 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	ERG9	P29704	444 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	REC104	P33323	182 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	SEF1	P34228	1148 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	YKR051W	P36142	418 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	MMS4	P38257	691 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	AIM18	P38884	321 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	YIL024C	P40543	189 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	ARF3	P40994	183 aa	RIP-Chip data	5.83	□□□□□ -1.48	not detected
RSA4	YCR072C	YGR201C	P42936	225 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	SSY5	P47002	699 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	ALY2	P47029	1046 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	PUS4	P48567	403 aa	Known RBP	5.83	□□□□□ -1.48
RSA4	YCR072C	NQM1	P53228	333 aa	Predicted RBP	5.83	□□□□□ -1.48
RSA4	YCR072C	LSM7	P53905	115 aa	Known RBP	5.83	□□□□□ -1.48
RSA4	YCR072C	REG1	Q00816	1014 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	RPA49	Q01080	415 aa	Predicted RBP	5.83	□□□□□ -1.48
RSA4	YCR072C	TPP1	Q03796	238 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	YDR109C	Q04585	715 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	SMA2	Q04658	369 aa		5.83	□□□□□ -1.48
RSA4	YCR072C	THI7	Q05998	598 aa		5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms