RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	YIL001W	P40560	513 aa		4.69	□□□□□ -1.66
ECM1	YAL059W	YPS6	P40583	537 aa		4.69	□□□□□ -1.66
ECM1	YAL059W	POP1	P41812	875 aa		4.69	□□□□□ -1.66
ECM1	YAL059W	RPS10B	P46784	105 aa	Known RBP	4.69	□□□□□ -1.66
ECM1	YAL059W	SNG1	P46950	547 aa		4.69	□□□□□ -1.66
ECM1	YAL059W	YJR011C	P47086	261 aa	Predicted RBP	4.69	□□□□□ -1.66
ECM1	YAL059W	SSU72	P53538	206 aa	Predicted RBP	4.69	□□□□□ -1.66
ECM1	YAL059W	DUG3	P53871	357 aa		4.69	□□□□□ -1.66
ECM1	YAL059W	YMR209C	Q03648	457 aa		4.69	□□□□□ -1.66
ECM1	YAL059W	ADH6	Q04894	360 aa	Known RBP	4.69	□□□□□ -1.66
ECM1	YAL059W	YDR222W	Q04925	415 aa		4.69	□□□□□ -1.66
ECM1	YAL059W	SIA1	Q12212	622 aa		4.69	□□□□□ -1.66
ECM1	YAL059W	THP2	O13539	261 aa	Known RBP	4.68	□□□□□ -1.66
ECM1	YAL059W	OPI3	P05375	206 aa		4.68	□□□□□ -1.66
ECM1	YAL059W	DST1	P07273	309 aa		4.68	□□□□□ -1.66
ECM1	YAL059W	MRP1	P10662	321 aa	Known RBP	4.68	□□□□□ -1.66
ECM1	YAL059W	VPS1	P21576	704 aa	Known RBP	4.68	□□□□□ -1.66
ECM1	YAL059W	DPB2	P24482	689 aa	Predicted RBP	4.68	□□□□□ -1.66
ECM1	YAL059W	PTP1	P25044	335 aa		4.68	□□□□□ -1.66
ECM1	YAL059W	SKT5	P34226	696 aa		4.68	□□□□□ -1.66
ECM1	YAL059W	YPT52	P36018	234 aa	Known RBP	4.68	□□□□□ -1.66
ECM1	YAL059W	CBT1	P36038	271 aa	Predicted RBP	4.68	□□□□□ -1.66
ECM1	YAL059W	PRS4	P38063	326 aa	Predicted RBP	4.68	□□□□□ -1.66
ECM1	YAL059W	RIB1	P38066	345 aa		4.68	□□□□□ -1.66
ECM1	YAL059W	YPK3	P38070	525 aa		4.68	□□□□□ -1.66
ECM1	YAL059W	TCM62	P38228	572 aa	Known RBP	4.68	□□□□□ -1.66
ECM1	YAL059W	SAS2	P40963	338 aa		4.68	□□□□□ -1.66
ECM1	YAL059W	YPT11	P48559	417 aa		4.68	□□□□□ -1.66
ECM1	YAL059W	YVH1	Q02256	364 aa	Known RBP	4.68	□□□□□ -1.66
ECM1	YAL059W	PFA5	Q03289	374 aa		4.68	□□□□□ -1.66
ECM1	YAL059W	SMP3	Q04174	516 aa		4.68	□□□□□ -1.66
ECM1	YAL059W	IVY1	Q04934	453 aa		4.68	□□□□□ -1.66
ECM1	YAL059W	TPO3	Q06451	622 aa		4.68	□□□□□ -1.66
ECM1	YAL059W	SAM4	Q08985	325 aa	Known RBP	4.68	□□□□□ -1.66
ECM1	YAL059W	RNH203	Q12338	110 aa		4.68	□□□□□ -1.66
ECM1	YAL059W	MAS2	P11914	482 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	URE2	P23202	354 aa	Known RBP	4.67	□□□□□ -1.66
ECM1	YAL059W	RAD57	P25301	460 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	PEX3	P28795	441 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	ERG9	P29704	444 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	YKL162C	P36052	402 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	CBP4	P37267	147 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	YMR134W	P40207	237 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	BTT1	P40314	149 aa	Predicted RBP	4.67	□□□□□ -1.66
ECM1	YAL059W	LSG1	P53145	640 aa	Known RBP	4.67	□□□□□ -1.66
ECM1	YAL059W	TRM112	P53738	135 aa	Predicted RBP	4.67	□□□□□ -1.66
ECM1	YAL059W	YPL068C	Q02749	293 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	RSC9	Q03124	581 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	PRM15	Q03262	622 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	HSP31	Q04432	237 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	RAD34	Q06665	692 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	SNA4	Q07549	140 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	YPR022C	Q12139	1133 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	MSH5	Q12175	901 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	NCE102	Q12207	173 aa	RIP-Chip data	4.67	□□□□□ -1.66	not detected
ECM1	YAL059W	NCB2	Q92317	146 aa		4.67	□□□□□ -1.66
ECM1	YAL059W	YPT1	P01123	206 aa	Known RBP	4.66	□□□□□ -1.66
ECM1	YAL059W	ATP1	P07251	545 aa	Known RBP	4.66	□□□□□ -1.66
ECM1	YAL059W	MRP2	P10663	115 aa	Predicted RBP	4.66	□□□□□ -1.66
ECM1	YAL059W	CLN3	P13365	580 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	HPR1	P17629	752 aa	Known RBP	4.66	□□□□□ -1.66
ECM1	YAL059W	SNF6	P18888	332 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	CKI1	P20485	582 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	ADE1	P27616	306 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	POP5	P28005	173 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	VMA6	P32366	345 aa	Known RBP	4.66	□□□□□ -1.66
ECM1	YAL059W	MSN2	P33748	704 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	AST1	P35183	429 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	MIC12	P38341	106 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	CCT2	P39076	527 aa	Known RBP	4.66	□□□□□ -1.66
ECM1	YAL059W	LYS12	P40495	371 aa	Known RBP	4.66	□□□□□ -1.66
ECM1	YAL059W	PSA1	P41940	361 aa	Known RBP	4.66	□□□□□ -1.66
ECM1	YAL059W	SNO3	P43544	222 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	COX16	P47081	118 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	IBA57	P47158	497 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	PMT5	P52867	743 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	MIG2	P53035	382 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	YIF1	P53845	314 aa	Known RBP	4.66	□□□□□ -1.66
ECM1	YAL059W	VAC7	P53950	1165 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	ALG11	P53954	548 aa	Known RBP	4.66	□□□□□ -1.66
ECM1	YAL059W	NUP116	Q02630	1113 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	NUP53	Q03790	475 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	UBX2	Q04228	584 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	KRE28	Q04431	385 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	DCR2	Q05924	578 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	SPO77	Q06134	477 aa		4.66	□□□□□ -1.66
ECM1	YAL059W	ABP140	Q08641	628 aa	Known RBP	4.66	□□□□□ -1.66
ECM1	YAL059W	CHO1	P08456	276 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	RPL12A	P0CX53	165 aa	Known RBP	4.65	□□□□□ -1.67
ECM1	YAL059W	RPL12B	P0CX54	165 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	TYR1	P20049	452 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	FUN19	P28003	413 aa	Predicted RBP	4.65	□□□□□ -1.67
ECM1	YAL059W	VMA5	P31412	392 aa	Known RBP	4.65	□□□□□ -1.67
ECM1	YAL059W	SPS19	P32573	292 aa	Known RBP	4.65	□□□□□ -1.67
ECM1	YAL059W	TMT1	P32643	299 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	UBC6	P33296	250 aa	Predicted RBP	4.65	□□□□□ -1.67
ECM1	YAL059W	ERG28	P40030	148 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	LCP5	P40079	357 aa	Predicted RBP	4.65	□□□□□ -1.67
ECM1	YAL059W	COA1	P40452	197 aa		4.65	□□□□□ -1.67
ECM1	YAL059W	ERG10	P41338	398 aa	Known RBP	4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms